Guide to the Human Genome
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Search of human proteins with 7657522

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7657522 ring finger protein 7 isoform 1 [Homo sapiens]
         (113 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7657522 ring finger protein 7 isoform 1 [Homo sapiens]             253   2e-68
gi|34304333 ring finger protein 7 isoform 3 [Homo sapiens]            124   2e-29
gi|7657508 ring-box 1 [Homo sapiens]                                  115   7e-27
gi|50409750 APC11 anaphase promoting complex subunit 11 isoform ...    74   2e-14
gi|50409789 APC11 anaphase promoting complex subunit 11 isoform ...    74   2e-14
gi|50409781 APC11 anaphase promoting complex subunit 11 isoform ...    74   2e-14
gi|50409804 APC11 anaphase promoting complex subunit 11 isoform ...    74   2e-14
gi|50409796 APC11 anaphase promoting complex subunit 11 isoform ...    74   2e-14
gi|18777675 APC11 anaphase promoting complex subunit 11 isoform ...    74   2e-14
gi|7662486 ring finger protein 44 [Homo sapiens]                       42   1e-04
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]            42   1e-04
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]            42   1e-04
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]            42   1e-04
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]            42   1e-04
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]            42   1e-04
gi|153945765 mitogen-activated protein kinase kinase kinase 1 [H...    41   2e-04
gi|21071001 autocrine motility factor receptor [Homo sapiens]          41   2e-04
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]           41   2e-04
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]           41   2e-04
gi|29789407 ring finger protein 149 [Homo sapiens]                     40   3e-04
gi|7706039 ring finger protein 181 [Homo sapiens]                      40   5e-04
gi|21040269 ring finger protein 133 [Homo sapiens]                     39   7e-04
gi|29788758 ring finger protein 130 [Homo sapiens]                     39   7e-04
gi|109134327 PTD016 protein [Homo sapiens]                             39   9e-04
gi|27436927 synoviolin 1 isoform b [Homo sapiens]                      39   0.001
gi|27436925 synoviolin 1 isoform a [Homo sapiens]                      39   0.001
gi|37675277 ring finger protein 148 [Homo sapiens]                     39   0.001
gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]          38   0.002
gi|37622894 ring finger protein 126 [Homo sapiens]                     37   0.003
gi|21539663 praja 1 isoform c [Homo sapiens]                           37   0.003

>gi|7657522 ring finger protein 7 isoform 1 [Homo sapiens]
          Length = 113

 Score =  253 bits (647), Expect = 2e-68
 Identities = 113/113 (100%), Positives = 113/113 (100%)

Query: 1   MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDA 60
           MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDA
Sbjct: 1   MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDA 60

Query: 61  CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK 113
           CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK
Sbjct: 61  CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK 113


>gi|34304333 ring finger protein 7 isoform 3 [Homo sapiens]
          Length = 90

 Score =  124 bits (310), Expect = 2e-29
 Identities = 59/65 (90%), Positives = 61/65 (93%), Gaps = 2/65 (3%)

Query: 1  MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQ--VM 58
          MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQ  V+
Sbjct: 1  MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQMPVL 60

Query: 59 DACLR 63
          D  L+
Sbjct: 61 DVKLK 65


>gi|7657508 ring-box 1 [Homo sapiens]
          Length = 108

 Score =  115 bits (288), Expect = 7e-27
 Identities = 49/97 (50%), Positives = 63/97 (64%), Gaps = 4/97 (4%)

Query: 20  SGSKSG-GDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAEN---KQEDCVV 75
           SG+ SG G K F +KKWNAVA+W+WD+  D CAICR  +MD C+ CQA       E+C V
Sbjct: 11  SGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTV 70

Query: 76  VWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIG 112
            WG CNH+FH  C+S W+K    CPL  ++W  Q+ G
Sbjct: 71  AWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYG 107


>gi|50409750 APC11 anaphase promoting complex subunit 11 isoform 2
           [Homo sapiens]
          Length = 84

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 32  LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91
           +K WN VA W W    + C ICR+     C  C+     +DC +VWG+C+H FH  C+  
Sbjct: 5   IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62

Query: 92  WV---KQNNRCPLCQQDW 106
           W+   +    CP+C+Q+W
Sbjct: 63  WLHAQQVQQHCPMCRQEW 80


>gi|50409789 APC11 anaphase promoting complex subunit 11 isoform 2
           [Homo sapiens]
          Length = 84

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 32  LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91
           +K WN VA W W    + C ICR+     C  C+     +DC +VWG+C+H FH  C+  
Sbjct: 5   IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62

Query: 92  WV---KQNNRCPLCQQDW 106
           W+   +    CP+C+Q+W
Sbjct: 63  WLHAQQVQQHCPMCRQEW 80


>gi|50409781 APC11 anaphase promoting complex subunit 11 isoform 2
           [Homo sapiens]
          Length = 84

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 32  LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91
           +K WN VA W W    + C ICR+     C  C+     +DC +VWG+C+H FH  C+  
Sbjct: 5   IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62

Query: 92  WV---KQNNRCPLCQQDW 106
           W+   +    CP+C+Q+W
Sbjct: 63  WLHAQQVQQHCPMCRQEW 80


>gi|50409804 APC11 anaphase promoting complex subunit 11 isoform 2
           [Homo sapiens]
          Length = 84

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 32  LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91
           +K WN VA W W    + C ICR+     C  C+     +DC +VWG+C+H FH  C+  
Sbjct: 5   IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62

Query: 92  WV---KQNNRCPLCQQDW 106
           W+   +    CP+C+Q+W
Sbjct: 63  WLHAQQVQQHCPMCRQEW 80


>gi|50409796 APC11 anaphase promoting complex subunit 11 isoform 2
           [Homo sapiens]
          Length = 84

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 32  LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91
           +K WN VA W W    + C ICR+     C  C+     +DC +VWG+C+H FH  C+  
Sbjct: 5   IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62

Query: 92  WV---KQNNRCPLCQQDW 106
           W+   +    CP+C+Q+W
Sbjct: 63  WLHAQQVQQHCPMCRQEW 80


>gi|18777675 APC11 anaphase promoting complex subunit 11 isoform 2
           [Homo sapiens]
          Length = 84

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 32  LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91
           +K WN VA W W    + C ICR+     C  C+     +DC +VWG+C+H FH  C+  
Sbjct: 5   IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62

Query: 92  WV---KQNNRCPLCQQDW 106
           W+   +    CP+C+Q+W
Sbjct: 63  WLHAQQVQQHCPMCRQEW 80


>gi|7662486 ring finger protein 44 [Homo sapiens]
          Length = 432

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 11/50 (22%)

Query: 67  ENKQEDCVVVWGE-----------CNHSFHNCCMSLWVKQNNRCPLCQQD 105
           +++Q  CVV + +           CNH FH  C+  W+K N  CP+C+ D
Sbjct: 374 QSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRAD 423


>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
          Length = 432

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 61  CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           C+ C  + +    + V   CNH FH  C+  W+K N  CP+C+ D
Sbjct: 380 CVVCMCDFESRQLLRVL-PCNHEFHAKCVDKWLKANRTCPICRAD 423


>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
          Length = 432

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 61  CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           C+ C  + +    + V   CNH FH  C+  W+K N  CP+C+ D
Sbjct: 380 CVVCMCDFESRQLLRVL-PCNHEFHAKCVDKWLKANRTCPICRAD 423


>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
          Length = 465

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 61  CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           C+ C  + +    + V   CNH FH  C+  W+K N  CP+C+ D
Sbjct: 413 CVVCMCDFESRQLLRVL-PCNHEFHAKCVDKWLKANRTCPICRAD 456


>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
          Length = 432

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 61  CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           C+ C  + +    + V   CNH FH  C+  W+K N  CP+C+ D
Sbjct: 380 CVVCMCDFESRQLLRVL-PCNHEFHAKCVDKWLKANRTCPICRAD 423


>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
          Length = 515

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 61  CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           C+ C  + +    + V   CNH FH  C+  W+K N  CP+C+ D
Sbjct: 463 CVVCMCDFESRQLLRVL-PCNHEFHAKCVDKWLKANRTCPICRAD 506


>gi|153945765 mitogen-activated protein kinase kinase kinase 1 [Homo
           sapiens]
          Length = 1512

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 26/98 (26%)

Query: 15  SHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCV 74
           SH+ SS S S      S+K          D E   C IC + ++D          +E   
Sbjct: 418 SHTLSSSSTSTSSSENSIK----------DEEEQMCPICLLGMLD----------EESLT 457

Query: 75  VVWGECNHSFHNCCMSLWVKQNNR------CPLCQQDW 106
           V    C +  H+ CMS+W ++  R      CPLC+  W
Sbjct: 458 VCEDGCRNKLHHHCMSIWAEECRRNREPLICPLCRSKW 495


>gi|21071001 autocrine motility factor receptor [Homo sapiens]
          Length = 643

 Score = 41.2 bits (95), Expect = 2e-04
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 8/41 (19%)

Query: 71  EDCVVVWGE--------CNHSFHNCCMSLWVKQNNRCPLCQ 103
           +DC + W          C H FHN C+  W++Q+  CP C+
Sbjct: 339 DDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379



 Score = 26.6 bits (57), Expect = 4.6
 Identities = 18/54 (33%), Positives = 22/54 (40%)

Query: 45  VECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNR 98
           V  D CAIC   +  A            C+  W E + S   C MSL +  NNR
Sbjct: 336 VNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNR 389


>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
          Length = 428

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 59  DACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           D+C  C    K  D V +   CNH FH  C+  W+ ++  CP+C+ D
Sbjct: 275 DSCAVCIELYKPNDLVRIL-TCNHIFHKTCVDPWLLEHRTCPMCKCD 320


>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
          Length = 402

 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 59  DACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           D+C  C    K  D V +   CNH FH  C+  W+ ++  CP+C+ D
Sbjct: 249 DSCAVCIELYKPNDLVRIL-TCNHIFHKTCVDPWLLEHRTCPMCKCD 294


>gi|29789407 ring finger protein 149 [Homo sapiens]
          Length = 400

 Score = 40.4 bits (93), Expect = 3e-04
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 13/69 (18%)

Query: 44  DVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQ 103
           DV+ + CA+C             EN +   ++    C H FH  C+  W+  +  CP+C+
Sbjct: 263 DVDAENCAVC------------IENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCK 310

Query: 104 QDWVVQRIG 112
            D V++ +G
Sbjct: 311 LD-VIKALG 318


>gi|7706039 ring finger protein 181 [Homo sapiens]
          Length = 153

 Score = 39.7 bits (91), Expect = 5e-04
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 61  CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           C  C  E ++E+  +    C+H FH+ C+  W+ + N CPLC+ +
Sbjct: 76  CPVCLLEFEEEETAIEM-PCHHLFHSSCILPWLSKTNSCPLCRYE 119


>gi|21040269 ring finger protein 133 [Homo sapiens]
          Length = 376

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 59  DACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           D+C+ C    K  D V +   C H FH  C+  W+  +  CP+C+ D
Sbjct: 254 DSCVICFERYKPNDIVRIL-TCKHFFHKNCIDPWILPHGTCPICKCD 299


>gi|29788758 ring finger protein 130 [Homo sapiens]
          Length = 419

 Score = 39.3 bits (90), Expect = 7e-04
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 59  DACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQ 103
           D C  C    KQ D V +   C H FH  C+  W+ ++  CP+C+
Sbjct: 262 DHCAVCIESYKQNDVVRIL-PCKHVFHKSCVDPWLSEHCTCPMCK 305


>gi|109134327 PTD016 protein [Homo sapiens]
          Length = 435

 Score = 38.9 bits (89), Expect = 9e-04
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 57  VMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQ 103
           V D C  CQAE ++   ++    C H F   CM+LW  +   CPLC+
Sbjct: 371 VDDICSICQAEFQKPILLI----CQHIFCEECMTLWFNREKTCPLCR 413


>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
          Length = 617

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 14/58 (24%)

Query: 48  DTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           + C ICR +++    R                CNH FH  C+  W ++   CP C+ D
Sbjct: 289 NVCIICREEMVTGAKRLP--------------CNHIFHTSCLRSWFQRQQTCPTCRMD 332


>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
          Length = 616

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 14/58 (24%)

Query: 48  DTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           + C ICR +++    R                CNH FH  C+  W ++   CP C+ D
Sbjct: 289 NVCIICREEMVTGAKRLP--------------CNHIFHTSCLRSWFQRQQTCPTCRMD 332


>gi|37675277 ring finger protein 148 [Homo sapiens]
          Length = 305

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 59  DACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105
           D C+ C    K +D V +   C H FH  C+  W+  +  CP+C+ D
Sbjct: 256 DNCVVCFDTYKPQDVVRIL-TCKHFFHKACIDPWLLAHRTCPMCKCD 301


>gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]
          Length = 708

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)

Query: 61  CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQ 104
           C  C +E  ++D +     C+H FH  C+S+W++++  CP+C++
Sbjct: 634 CPICCSEYIKDD-IATELPCHHFFHKPCVSIWLQKSGTCPVCRR 676


>gi|37622894 ring finger protein 126 [Homo sapiens]
          Length = 311

 Score = 37.4 bits (85), Expect = 0.003
 Identities = 11/25 (44%), Positives = 20/25 (80%)

Query: 80  CNHSFHNCCMSLWVKQNNRCPLCQQ 104
           CNH FH+ C+  W++Q++ CP+C++
Sbjct: 247 CNHLFHDGCIVPWLEQHDSCPVCRK 271


>gi|21539663 praja 1 isoform c [Homo sapiens]
          Length = 455

 Score = 37.0 bits (84), Expect = 0.003
 Identities = 10/24 (41%), Positives = 19/24 (79%)

Query: 80  CNHSFHNCCMSLWVKQNNRCPLCQ 103
           C+H FH  C+S+W++++  CP+C+
Sbjct: 425 CHHYFHKPCVSIWLQKSGTCPVCR 448


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.130    0.467 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,125,793
Number of Sequences: 37866
Number of extensions: 210928
Number of successful extensions: 708
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 583
Number of HSP's gapped (non-prelim): 178
length of query: 113
length of database: 18,247,518
effective HSP length: 83
effective length of query: 30
effective length of database: 15,104,640
effective search space: 453139200
effective search space used: 453139200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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