BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|7657522 ring finger protein 7 isoform 1 [Homo sapiens] (113 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|7657522 ring finger protein 7 isoform 1 [Homo sapiens] 253 2e-68 gi|34304333 ring finger protein 7 isoform 3 [Homo sapiens] 124 2e-29 gi|7657508 ring-box 1 [Homo sapiens] 115 7e-27 gi|50409750 APC11 anaphase promoting complex subunit 11 isoform ... 74 2e-14 gi|50409789 APC11 anaphase promoting complex subunit 11 isoform ... 74 2e-14 gi|50409781 APC11 anaphase promoting complex subunit 11 isoform ... 74 2e-14 gi|50409804 APC11 anaphase promoting complex subunit 11 isoform ... 74 2e-14 gi|50409796 APC11 anaphase promoting complex subunit 11 isoform ... 74 2e-14 gi|18777675 APC11 anaphase promoting complex subunit 11 isoform ... 74 2e-14 gi|7662486 ring finger protein 44 [Homo sapiens] 42 1e-04 gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 42 1e-04 gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 42 1e-04 gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 42 1e-04 gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 42 1e-04 gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 42 1e-04 gi|153945765 mitogen-activated protein kinase kinase kinase 1 [H... 41 2e-04 gi|21071001 autocrine motility factor receptor [Homo sapiens] 41 2e-04 gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 41 2e-04 gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 41 2e-04 gi|29789407 ring finger protein 149 [Homo sapiens] 40 3e-04 gi|7706039 ring finger protein 181 [Homo sapiens] 40 5e-04 gi|21040269 ring finger protein 133 [Homo sapiens] 39 7e-04 gi|29788758 ring finger protein 130 [Homo sapiens] 39 7e-04 gi|109134327 PTD016 protein [Homo sapiens] 39 9e-04 gi|27436927 synoviolin 1 isoform b [Homo sapiens] 39 0.001 gi|27436925 synoviolin 1 isoform a [Homo sapiens] 39 0.001 gi|37675277 ring finger protein 148 [Homo sapiens] 39 0.001 gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] 38 0.002 gi|37622894 ring finger protein 126 [Homo sapiens] 37 0.003 gi|21539663 praja 1 isoform c [Homo sapiens] 37 0.003 >gi|7657522 ring finger protein 7 isoform 1 [Homo sapiens] Length = 113 Score = 253 bits (647), Expect = 2e-68 Identities = 113/113 (100%), Positives = 113/113 (100%) Query: 1 MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDA 60 MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDA Sbjct: 1 MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDA 60 Query: 61 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK 113 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK Sbjct: 61 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK 113 >gi|34304333 ring finger protein 7 isoform 3 [Homo sapiens] Length = 90 Score = 124 bits (310), Expect = 2e-29 Identities = 59/65 (90%), Positives = 61/65 (93%), Gaps = 2/65 (3%) Query: 1 MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQ--VM 58 MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQ V+ Sbjct: 1 MADVEDGEETCALASHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQMPVL 60 Query: 59 DACLR 63 D L+ Sbjct: 61 DVKLK 65 >gi|7657508 ring-box 1 [Homo sapiens] Length = 108 Score = 115 bits (288), Expect = 7e-27 Identities = 49/97 (50%), Positives = 63/97 (64%), Gaps = 4/97 (4%) Query: 20 SGSKSG-GDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAEN---KQEDCVV 75 SG+ SG G K F +KKWNAVA+W+WD+ D CAICR +MD C+ CQA E+C V Sbjct: 11 SGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTV 70 Query: 76 VWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIG 112 WG CNH+FH C+S W+K CPL ++W Q+ G Sbjct: 71 AWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYG 107 >gi|50409750 APC11 anaphase promoting complex subunit 11 isoform 2 [Homo sapiens] Length = 84 Score = 74.3 bits (181), Expect = 2e-14 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%) Query: 32 LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91 +K WN VA W W + C ICR+ C C+ +DC +VWG+C+H FH C+ Sbjct: 5 IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62 Query: 92 WV---KQNNRCPLCQQDW 106 W+ + CP+C+Q+W Sbjct: 63 WLHAQQVQQHCPMCRQEW 80 >gi|50409789 APC11 anaphase promoting complex subunit 11 isoform 2 [Homo sapiens] Length = 84 Score = 74.3 bits (181), Expect = 2e-14 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%) Query: 32 LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91 +K WN VA W W + C ICR+ C C+ +DC +VWG+C+H FH C+ Sbjct: 5 IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62 Query: 92 WV---KQNNRCPLCQQDW 106 W+ + CP+C+Q+W Sbjct: 63 WLHAQQVQQHCPMCRQEW 80 >gi|50409781 APC11 anaphase promoting complex subunit 11 isoform 2 [Homo sapiens] Length = 84 Score = 74.3 bits (181), Expect = 2e-14 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%) Query: 32 LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91 +K WN VA W W + C ICR+ C C+ +DC +VWG+C+H FH C+ Sbjct: 5 IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62 Query: 92 WV---KQNNRCPLCQQDW 106 W+ + CP+C+Q+W Sbjct: 63 WLHAQQVQQHCPMCRQEW 80 >gi|50409804 APC11 anaphase promoting complex subunit 11 isoform 2 [Homo sapiens] Length = 84 Score = 74.3 bits (181), Expect = 2e-14 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%) Query: 32 LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91 +K WN VA W W + C ICR+ C C+ +DC +VWG+C+H FH C+ Sbjct: 5 IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62 Query: 92 WV---KQNNRCPLCQQDW 106 W+ + CP+C+Q+W Sbjct: 63 WLHAQQVQQHCPMCRQEW 80 >gi|50409796 APC11 anaphase promoting complex subunit 11 isoform 2 [Homo sapiens] Length = 84 Score = 74.3 bits (181), Expect = 2e-14 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%) Query: 32 LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91 +K WN VA W W + C ICR+ C C+ +DC +VWG+C+H FH C+ Sbjct: 5 IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62 Query: 92 WV---KQNNRCPLCQQDW 106 W+ + CP+C+Q+W Sbjct: 63 WLHAQQVQQHCPMCRQEW 80 >gi|18777675 APC11 anaphase promoting complex subunit 11 isoform 2 [Homo sapiens] Length = 84 Score = 74.3 bits (181), Expect = 2e-14 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%) Query: 32 LKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSL 91 +K WN VA W W + C ICR+ C C+ +DC +VWG+C+H FH C+ Sbjct: 5 IKCWNGVATWLWVANDENCGICRMAFNGCCPDCKVPG--DDCPLVWGQCSHCFHMHCILK 62 Query: 92 WV---KQNNRCPLCQQDW 106 W+ + CP+C+Q+W Sbjct: 63 WLHAQQVQQHCPMCRQEW 80 >gi|7662486 ring finger protein 44 [Homo sapiens] Length = 432 Score = 42.0 bits (97), Expect = 1e-04 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 11/50 (22%) Query: 67 ENKQEDCVVVWGE-----------CNHSFHNCCMSLWVKQNNRCPLCQQD 105 +++Q CVV + + CNH FH C+ W+K N CP+C+ D Sbjct: 374 QSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRAD 423 >gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] Length = 432 Score = 41.6 bits (96), Expect = 1e-04 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 61 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 C+ C + + + V CNH FH C+ W+K N CP+C+ D Sbjct: 380 CVVCMCDFESRQLLRVL-PCNHEFHAKCVDKWLKANRTCPICRAD 423 >gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] Length = 432 Score = 41.6 bits (96), Expect = 1e-04 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 61 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 C+ C + + + V CNH FH C+ W+K N CP+C+ D Sbjct: 380 CVVCMCDFESRQLLRVL-PCNHEFHAKCVDKWLKANRTCPICRAD 423 >gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] Length = 465 Score = 41.6 bits (96), Expect = 1e-04 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 61 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 C+ C + + + V CNH FH C+ W+K N CP+C+ D Sbjct: 413 CVVCMCDFESRQLLRVL-PCNHEFHAKCVDKWLKANRTCPICRAD 456 >gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] Length = 432 Score = 41.6 bits (96), Expect = 1e-04 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 61 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 C+ C + + + V CNH FH C+ W+K N CP+C+ D Sbjct: 380 CVVCMCDFESRQLLRVL-PCNHEFHAKCVDKWLKANRTCPICRAD 423 >gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] Length = 515 Score = 41.6 bits (96), Expect = 1e-04 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Query: 61 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 C+ C + + + V CNH FH C+ W+K N CP+C+ D Sbjct: 463 CVVCMCDFESRQLLRVL-PCNHEFHAKCVDKWLKANRTCPICRAD 506 >gi|153945765 mitogen-activated protein kinase kinase kinase 1 [Homo sapiens] Length = 1512 Score = 41.2 bits (95), Expect = 2e-04 Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 26/98 (26%) Query: 15 SHSGSSGSKSGGDKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCV 74 SH+ SS S S S+K D E C IC + ++D +E Sbjct: 418 SHTLSSSSTSTSSSENSIK----------DEEEQMCPICLLGMLD----------EESLT 457 Query: 75 VVWGECNHSFHNCCMSLWVKQNNR------CPLCQQDW 106 V C + H+ CMS+W ++ R CPLC+ W Sbjct: 458 VCEDGCRNKLHHHCMSIWAEECRRNREPLICPLCRSKW 495 >gi|21071001 autocrine motility factor receptor [Homo sapiens] Length = 643 Score = 41.2 bits (95), Expect = 2e-04 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 8/41 (19%) Query: 71 EDCVVVWGE--------CNHSFHNCCMSLWVKQNNRCPLCQ 103 +DC + W C H FHN C+ W++Q+ CP C+ Sbjct: 339 DDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCR 379 Score = 26.6 bits (57), Expect = 4.6 Identities = 18/54 (33%), Positives = 22/54 (40%) Query: 45 VECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNR 98 V D CAIC + A C+ W E + S C MSL + NNR Sbjct: 336 VNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMSLNIADNNR 389 >gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] Length = 428 Score = 40.8 bits (94), Expect = 2e-04 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 59 DACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 D+C C K D V + CNH FH C+ W+ ++ CP+C+ D Sbjct: 275 DSCAVCIELYKPNDLVRIL-TCNHIFHKTCVDPWLLEHRTCPMCKCD 320 >gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] Length = 402 Score = 40.8 bits (94), Expect = 2e-04 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Query: 59 DACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 D+C C K D V + CNH FH C+ W+ ++ CP+C+ D Sbjct: 249 DSCAVCIELYKPNDLVRIL-TCNHIFHKTCVDPWLLEHRTCPMCKCD 294 >gi|29789407 ring finger protein 149 [Homo sapiens] Length = 400 Score = 40.4 bits (93), Expect = 3e-04 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 13/69 (18%) Query: 44 DVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQ 103 DV+ + CA+C EN + ++ C H FH C+ W+ + CP+C+ Sbjct: 263 DVDAENCAVC------------IENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCK 310 Query: 104 QDWVVQRIG 112 D V++ +G Sbjct: 311 LD-VIKALG 318 >gi|7706039 ring finger protein 181 [Homo sapiens] Length = 153 Score = 39.7 bits (91), Expect = 5e-04 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 61 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 C C E ++E+ + C+H FH+ C+ W+ + N CPLC+ + Sbjct: 76 CPVCLLEFEEEETAIEM-PCHHLFHSSCILPWLSKTNSCPLCRYE 119 >gi|21040269 ring finger protein 133 [Homo sapiens] Length = 376 Score = 39.3 bits (90), Expect = 7e-04 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 59 DACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 D+C+ C K D V + C H FH C+ W+ + CP+C+ D Sbjct: 254 DSCVICFERYKPNDIVRIL-TCKHFFHKNCIDPWILPHGTCPICKCD 299 >gi|29788758 ring finger protein 130 [Homo sapiens] Length = 419 Score = 39.3 bits (90), Expect = 7e-04 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%) Query: 59 DACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQ 103 D C C KQ D V + C H FH C+ W+ ++ CP+C+ Sbjct: 262 DHCAVCIESYKQNDVVRIL-PCKHVFHKSCVDPWLSEHCTCPMCK 305 >gi|109134327 PTD016 protein [Homo sapiens] Length = 435 Score = 38.9 bits (89), Expect = 9e-04 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Query: 57 VMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQ 103 V D C CQAE ++ ++ C H F CM+LW + CPLC+ Sbjct: 371 VDDICSICQAEFQKPILLI----CQHIFCEECMTLWFNREKTCPLCR 413 >gi|27436927 synoviolin 1 isoform b [Homo sapiens] Length = 617 Score = 38.5 bits (88), Expect = 0.001 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 14/58 (24%) Query: 48 DTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 + C ICR +++ R CNH FH C+ W ++ CP C+ D Sbjct: 289 NVCIICREEMVTGAKRLP--------------CNHIFHTSCLRSWFQRQQTCPTCRMD 332 >gi|27436925 synoviolin 1 isoform a [Homo sapiens] Length = 616 Score = 38.5 bits (88), Expect = 0.001 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 14/58 (24%) Query: 48 DTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 + C ICR +++ R CNH FH C+ W ++ CP C+ D Sbjct: 289 NVCIICREEMVTGAKRLP--------------CNHIFHTSCLRSWFQRQQTCPTCRMD 332 >gi|37675277 ring finger protein 148 [Homo sapiens] Length = 305 Score = 38.5 bits (88), Expect = 0.001 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%) Query: 59 DACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQD 105 D C+ C K +D V + C H FH C+ W+ + CP+C+ D Sbjct: 256 DNCVVCFDTYKPQDVVRIL-TCKHFFHKACIDPWLLAHRTCPMCKCD 301 >gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] Length = 708 Score = 38.1 bits (87), Expect = 0.002 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Query: 61 CLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQ 104 C C +E ++D + C+H FH C+S+W++++ CP+C++ Sbjct: 634 CPICCSEYIKDD-IATELPCHHFFHKPCVSIWLQKSGTCPVCRR 676 >gi|37622894 ring finger protein 126 [Homo sapiens] Length = 311 Score = 37.4 bits (85), Expect = 0.003 Identities = 11/25 (44%), Positives = 20/25 (80%) Query: 80 CNHSFHNCCMSLWVKQNNRCPLCQQ 104 CNH FH+ C+ W++Q++ CP+C++ Sbjct: 247 CNHLFHDGCIVPWLEQHDSCPVCRK 271 >gi|21539663 praja 1 isoform c [Homo sapiens] Length = 455 Score = 37.0 bits (84), Expect = 0.003 Identities = 10/24 (41%), Positives = 19/24 (79%) Query: 80 CNHSFHNCCMSLWVKQNNRCPLCQ 103 C+H FH C+S+W++++ CP+C+ Sbjct: 425 CHHYFHKPCVSIWLQKSGTCPVCR 448 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.322 0.130 0.467 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,125,793 Number of Sequences: 37866 Number of extensions: 210928 Number of successful extensions: 708 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 69 Number of HSP's that attempted gapping in prelim test: 583 Number of HSP's gapped (non-prelim): 178 length of query: 113 length of database: 18,247,518 effective HSP length: 83 effective length of query: 30 effective length of database: 15,104,640 effective search space: 453139200 effective search space used: 453139200 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.