Guide to the Human Genome
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Name: RNF7 Sequence: fasta or formatted (113aa) NCBI GI: 7657522
Description:

ring finger protein 7 isoform 1

Referenced in:

Cullins and SCF Complexes
Ring Finger Proteins

Other entries for this name:
alt prot [90aa] ring finger protein 7 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1          8           1
 C cysteine           10.6         12           2
 D aspartate           7.1          8           1
 E glutamate           6.2          7           2
 F phenylalanine       1.8          2           1
 G glycine             6.2          7           2
 H histidine           2.7          3           1
 I isoleucine          1.8          2           1
 K lysine              6.2          7           2
 L leucine             4.4          5           1
 M methionine          4.4          5           1
 N asparagine          5.3          6           2
 P proline             0.9          1           1
 Q glutamine           6.2          7           2
 R arginine            3.5          4           1
 S serine              8.8         10           2
 T threonine           1.8          2           1
 V valine              9.7         11           3
 W tryptophan          5.3          6           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 7 isoform 1 
RNF7                  0.434   ring finger protein 7 isoform 3 
RBX1                  0.395   ring-box 1 
ANAPC11               0.215   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.215   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.215   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.215   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.215   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.215   APC11 anaphase promoting complex subunit 11 isoform ...
RNF44                 0.075   ring finger protein 44 
RNF38                 0.075   ring finger protein 38 isoform 2 
RNF38                 0.075   ring finger protein 38 isoform 2 
RNF38                 0.075   ring finger protein 38 isoform 3 
RNF38                 0.075   ring finger protein 38 isoform 2 
RNF38                 0.075   ring finger protein 38 isoform 1 
MAP3K1                0.070   mitogen-activated protein kinase kinase kinase 1 [H...
AMFR                  0.070   autocrine motility factor receptor 
RNF128                0.070   ring finger protein 128 isoform 1 
RNF128                0.070   ring finger protein 128 isoform 2 
RNF149                0.066   ring finger protein 149 
RNF181                0.066   ring finger protein 181 
RNF133                0.061   ring finger protein 133 
RNF130                0.061   ring finger protein 130 
RNFT1                 0.061   PTD016 protein 
SYVN1                 0.061   synoviolin 1 isoform b 
SYVN1                 0.061   synoviolin 1 isoform a 
RNF148                0.061   ring finger protein 148 
PJA2                  0.057   praja 2, RING-H2 motif containing 
RNF126                0.053   ring finger protein 126 
PJA1                  0.053   praja 1 isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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