Guide to the Human Genome
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Name: RBX1 Sequence: fasta or formatted (108aa) NCBI GI: 7657508
Description:

ring-box 1

Referenced in:

Cullins and SCF Complexes
Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         13           3
 C cysteine            7.4          8           1
 D aspartate           5.6          6           1
 E glutamate           5.6          6           2
 F phenylalanine       3.7          4           1
 G glycine             4.6          5           1
 H histidine           4.6          5           1
 I isoleucine          4.6          5           1
 K lysine              5.6          6           2
 L leucine             3.7          4           1
 M methionine          2.8          3           1
 N asparagine          6.5          7           1
 P proline             1.9          2           1
 Q glutamine           3.7          4           1
 R arginine            4.6          5           1
 S serine              4.6          5           1
 T threonine           4.6          5           1
 V valine              7.4          8           2
 W tryptophan          5.6          6           1
 Y tyrosine            0.9          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring-box 1 
RNF7                  0.417   ring finger protein 7 isoform 1 
ANAPC11               0.264   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.264   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.264   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.264   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.264   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.264   APC11 anaphase promoting complex subunit 11 isoform ...
RNF7                  0.148   ring finger protein 7 isoform 3 
RNF24                 0.069   ring finger protein 24 isoform 2 
RNF24                 0.069   ring finger protein 24 isoform 1 
RNF24                 0.069   ring finger protein 24 isoform 1 
RLIM                  0.060   ring finger protein, LIM domain interacting 
RLIM                  0.060   ring finger protein, LIM domain interacting 
RNF122                0.060   ring finger protein 122 
RNF38                 0.060   ring finger protein 38 isoform 2 
RNF38                 0.060   ring finger protein 38 isoform 2 
RNF38                 0.060   ring finger protein 38 isoform 3 
RNF38                 0.060   ring finger protein 38 isoform 2 
RNF38                 0.060   ring finger protein 38 isoform 1 
ANAPC11               0.060   APC11 anaphase promoting complex subunit 11 isoform ...
RNF44                 0.060   ring finger protein 44 
RNF115                0.056   Rabring 7 
RNF6                  0.056   ring finger protein 6 
RNF6                  0.056   ring finger protein 6 
RNF6                  0.056   ring finger protein 6 
RNF145                0.051   ring finger protein 145 
PEX10                 0.046   peroxisome biogenesis factor 10 isoform 1 
PEX10                 0.046   peroxisome biogenesis factor 10 isoform 2 
SFRS2IP               0.042   splicing factor, arginine/serine-rich 2, interactin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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