PJA1 13353

Name: PJA1	Sequence: fasta or formatted (455aa)		NCBI GI: 21539663
Description: praja 1 isoform c		Referenced in: Ring Finger Proteins
Other entries for this name: alt prot [643aa] praja 1 isoform a alt prot [588aa] praja 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 33 2 C cysteine 2.2 10 2 D aspartate 6.8 31 2 E glutamate 10.1 46 2 F phenylalanine 2.0 9 1 G glycine 7.3 33 2 H histidine 2.4 11 2 I isoleucine 2.0 9 1 K lysine 3.5 16 1 L leucine 5.7 26 1 M methionine 2.0 9 1 N asparagine 3.5 16 3 P proline 7.3 33 3 Q glutamine 3.5 16 1 R arginine 7.0 32 4 S serine 12.5 57 3 T threonine 4.8 22 2 V valine 4.6 21 1 W tryptophan 2.0 9 1 Y tyrosine 3.5 16 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 praja 1 isoform c PJA1 0.784 praja 1 isoform b PJA1 0.784 praja 1 isoform a PJA2 0.421 praja 2, RING-H2 motif containing RNF126 0.062 ring finger protein 126 RNF115 0.057 Rabring 7 RNF181 0.051 ring finger protein 181 RNF6 0.037 ring finger protein 6 RNF6 0.037 ring finger protein 6 RNF6 0.037 ring finger protein 6 RLIM 0.034 ring finger protein, LIM domain interacting RLIM 0.034 ring finger protein, LIM domain interacting LOC100290625 0.033 PREDICTED: hypothetical protein XP_002347002 LOC100289630 0.033 PREDICTED: hypothetical protein XP_002342853 RNF133 0.033 ring finger protein 133 RNF44 0.033 ring finger protein 44 RNF38 0.032 ring finger protein 38 isoform 2 RNF38 0.032 ring finger protein 38 isoform 2 RNF38 0.032 ring finger protein 38 isoform 3 RNF38 0.032 ring finger protein 38 isoform 2 RNF38 0.032 ring finger protein 38 isoform 1 RNF130 0.030 ring finger protein 130 ZNRF3 0.030 zinc and ring finger 3 RNF148 0.029 ring finger protein 148 SYVN1 0.029 synoviolin 1 isoform b SYVN1 0.029 synoviolin 1 isoform a RNF167 0.029 ring finger protein 167 RNF128 0.028 ring finger protein 128 isoform 1 RNF128 0.028 ring finger protein 128 isoform 2 RNF150 0.028 ring finger protein 150 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.