Guide to the Human Genome
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Name: ANAPC11 Sequence: fasta or formatted (84aa) NCBI GI: 50409750
Description:

APC11 anaphase promoting complex subunit 11 isoform 2

Referenced in:

Anaphase-promoting Complex
Cullins and SCF Complexes
Ring Finger Proteins

Other entries for this name:
alt mRNA [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
alt mRNA [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
alt mRNA [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
alt mRNA [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
alt mRNA [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
alt prot [196aa] APC11 anaphase promoting complex subunit 11 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8          4           1
 C cysteine           14.3         12           2
 D aspartate           4.8          4           2
 E glutamate           3.6          3           1
 F phenylalanine       3.6          3           1
 G glycine             6.0          5           1
 H histidine           6.0          5           1
 I isoleucine          3.6          3           1
 K lysine              8.3          7           1
 L leucine             4.8          4           1
 M methionine          4.8          4           1
 N asparagine          4.8          4           1
 P proline             4.8          4           1
 Q glutamine           7.1          6           2
 R arginine            2.4          2           1
 S serine              1.2          1           1
 T threonine           1.2          1           1
 V valine              7.1          6           1
 W tryptophan          7.1          6           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   APC11 anaphase promoting complex subunit 11 isoform ... 
ANAPC11               1.000   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               1.000   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               1.000   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               1.000   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               1.000   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.403   APC11 anaphase promoting complex subunit 11 isoform ...
RBX1                  0.315   ring-box 1 
RNF7                  0.271   ring finger protein 7 isoform 1 
RNF139                0.066   ring finger protein 139 
RNF24                 0.066   ring finger protein 24 isoform 2 
RNF24                 0.066   ring finger protein 24 isoform 1 
RNF24                 0.066   ring finger protein 24 isoform 1 
RNF151                0.066   ring finger protein 151 
RNF145                0.066   ring finger protein 145 
RNF122                0.061   ring finger protein 122 
RLIM                  0.055   ring finger protein, LIM domain interacting 
RLIM                  0.055   ring finger protein, LIM domain interacting 
RNF6                  0.055   ring finger protein 6 
AMFR                  0.055   autocrine motility factor receptor 
MKRN3                 0.055   makorin ring finger protein 3 
RNF6                  0.055   ring finger protein 6 
RNF6                  0.055   ring finger protein 6 
ZNRF4                 0.055   zinc and ring finger 4 
RNF103                0.050   ring finger protein 103 
SYVN1                 0.050   synoviolin 1 isoform b 
SYVN1                 0.050   synoviolin 1 isoform a 
BFAR                  0.050   bifunctional apoptosis regulator 
RNF181                0.050   ring finger protein 181 
RNF38                 0.050   ring finger protein 38 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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