Guide to the Human Genome
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Name: SPINK4 Sequence: fasta or formatted (86aa) NCBI GI: 7657453
Description:

serine peptidase inhibitor, Kazal type 4

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3          8           2
 C cysteine            7.0          6           1
 D aspartate           4.7          4           1
 E glutamate           4.7          4           1
 F phenylalanine       1.2          1           1
 G glycine             4.7          4           1
 H histidine           1.2          1           1
 I isoleucine          5.8          5           1
 K lysine              5.8          5           1
 L leucine            10.5          9           2
 M methionine          5.8          5           1
 N asparagine          2.3          2           1
 P proline             4.7          4           1
 Q glutamine           5.8          5           1
 R arginine            4.7          4           1
 S serine              4.7          4           1
 T threonine           5.8          5           1
 V valine              9.3          8           2
 W tryptophan          1.2          1           1
 Y tyrosine            1.2          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine peptidase inhibitor, Kazal type 4 
SPINK1                0.138   serine protease inhibitor, Kazal type 1 precursor [H...
SPINK2                0.132   serine protease inhibitor, Kazal type 2 (acrosin-try...
SPINK5                0.125   serine peptidase inhibitor, Kazal type 5 isoform c ...
SPINK5                0.125   serine peptidase inhibitor, Kazal type 5 isoform b p...
SPINK5                0.125   serine peptidase inhibitor, Kazal type 5 isoform a ...
FST                   0.125   follistatin isoform FST317 precursor 
FST                   0.125   follistatin isoform FST344 precursor 
SPINK7                0.118   esophagus cancer-related gene-2 
SPINK6                0.118   serine protease inhibitor, Kazal type 6 
FSTL3                 0.112   follistatin-like 3 glycoprotein precursor 
SPINK5L2              0.112   Kazal type serine protease inhibitor 5-like 2 
SPINK9                0.105   serine peptidase inhibitor, Kazal type 9 
AGRN                  0.092   agrin 
TMEFF2                0.079   transmembrane protein with EGF-like and two follista...
FSTL1                 0.066   follistatin-like 1 precursor 
SPOCK1                0.059   sparc/osteonectin, cwcv and kazal-like domains proteo...
TMEFF1                0.059   transmembrane protein with EGF-like and two follista...
SPINK8                0.059   serine peptidase inhibitor, Kazal type 8 (putative)...
SPINK5L3              0.053   serine PI Kazal type 5-like 3 
FSTL5                 0.046   follistatin-like 5 isoform c 
FSTL5                 0.046   follistatin-like 5 isoform b 
FSTL5                 0.046   follistatin-like 5 isoform a 
CPAMD8                0.033   C3 and PZP-like, alpha-2-macroglobulin domain conta...
HTRA3                 0.033   HtrA serine peptidase 3 
SPARCL1               0.033   SPARC-like 1 
SPARCL1               0.033   SPARC-like 1 
SPOCK2                0.026   sparc/osteonectin, cwcv and kazal-like domains proteo...
SPOCK3                0.020   testican 3 isoform 1 
SPOCK3                0.020   testican 3 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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