Guide to the Human Genome
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Name: SPINK6 Sequence: fasta or formatted (80aa) NCBI GI: 68299793
Description:

serine protease inhibitor, Kazal type 6

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8          3           1
 C cysteine            8.8          7           1
 D aspartate           3.8          3           1
 E glutamate           2.5          2           1
 F phenylalanine       7.5          6           1
 G glycine            13.8         11           2
 H histidine           2.5          2           1
 I isoleucine          2.5          2           1
 K lysine             10.0          8           1
 L leucine            10.0          8           3
 M methionine          2.5          2           1
 N asparagine          2.5          2           1
 P proline             3.8          3           1
 Q glutamine           5.0          4           1
 R arginine            1.2          1           1
 S serine              8.8          7           1
 T threonine           3.8          3           1
 V valine              5.0          4           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.5          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine protease inhibitor, Kazal type 6 
SPINK9                0.181   serine peptidase inhibitor, Kazal type 9 
SPINK5                0.174   serine peptidase inhibitor, Kazal type 5 isoform c ...
SPINK5                0.174   serine peptidase inhibitor, Kazal type 5 isoform b p...
SPINK5                0.174   serine peptidase inhibitor, Kazal type 5 isoform a ...
SPINK7                0.168   esophagus cancer-related gene-2 
SPINK1                0.161   serine protease inhibitor, Kazal type 1 precursor [H...
SPINK2                0.161   serine protease inhibitor, Kazal type 2 (acrosin-try...
KAZALD1               0.121   Kazal-type serine peptidase inhibitor domain 1 precu...
SPINK4                0.121   serine peptidase inhibitor, Kazal type 4 
FST                   0.094   follistatin isoform FST317 precursor 
FST                   0.094   follistatin isoform FST344 precursor 
SPINK5L2              0.094   Kazal type serine protease inhibitor 5-like 2 
FSTL1                 0.087   follistatin-like 1 precursor 
FSTL5                 0.074   follistatin-like 5 isoform c 
FSTL5                 0.074   follistatin-like 5 isoform b 
FSTL5                 0.074   follistatin-like 5 isoform a 
AGRN                  0.074   agrin 
SPINK8                0.067   serine peptidase inhibitor, Kazal type 8 (putative)...
TMEFF2                0.060   transmembrane protein with EGF-like and two follista...
TMEFF1                0.054   transmembrane protein with EGF-like and two follista...
SPOCK3                0.047   testican 3 isoform 1 
SPOCK3                0.047   testican 3 isoform 2 
FSTL4                 0.047   follistatin-like 4 
CPAMD8                0.047   C3 and PZP-like, alpha-2-macroglobulin domain conta...
SPINK5L3              0.047   serine PI Kazal type 5-like 3 
ZNF185                0.040   zinc finger protein 185 
HTRA3                 0.040   HtrA serine peptidase 3 
FSTL3                 0.034   follistatin-like 3 glycoprotein precursor 
SMOC1                 0.034   secreted modular calcium-binding protein 1 isoform 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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