Guide to the Human Genome
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Name: SPINK5L3 Sequence: fasta or formatted (94aa) NCBI GI: 92110017
Description:

serine PI Kazal type 5-like 3

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4          6           2
 C cysteine            7.4          7           1
 D aspartate           5.3          5           1
 E glutamate           4.3          4           1
 F phenylalanine      11.7         11           2
 G glycine             3.2          3           1
 H histidine           4.3          4           1
 I isoleucine          5.3          5           2
 K lysine              7.4          7           1
 L leucine             3.2          3           1
 M methionine          2.1          2           1
 N asparagine          5.3          5           1
 P proline             7.4          7           1
 Q glutamine           2.1          2           1
 R arginine            5.3          5           1
 S serine              3.2          3           1
 T threonine           5.3          5           1
 V valine              5.3          5           1
 W tryptophan          1.1          1           1
 Y tyrosine            4.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine PI Kazal type 5-like 3 
SPINK9                0.139   serine peptidase inhibitor, Kazal type 9 
SPINK5L2              0.134   Kazal type serine protease inhibitor 5-like 2 
SPINK2                0.096   serine protease inhibitor, Kazal type 2 (acrosin-try...
SPINK1                0.091   serine protease inhibitor, Kazal type 1 precursor [H...
SPINK7                0.070   esophagus cancer-related gene-2 
AGRN                  0.064   agrin 
SPINK5                0.064   serine peptidase inhibitor, Kazal type 5 isoform b p...
SPINK5                0.064   serine peptidase inhibitor, Kazal type 5 isoform a ...
TMEFF2                0.053   transmembrane protein with EGF-like and two follista...
TMEFF1                0.053   transmembrane protein with EGF-like and two follista...
SPINK5                0.053   serine peptidase inhibitor, Kazal type 5 isoform c ...
FST                   0.043   follistatin isoform FST317 precursor 
FST                   0.043   follistatin isoform FST344 precursor 
SPINK4                0.043   serine peptidase inhibitor, Kazal type 4 
SPINK6                0.037   serine protease inhibitor, Kazal type 6 
SMOC2                 0.027   SPARC related modular calcium binding 2 
SPOCK3                0.016   testican 3 isoform 1 
SPOCK3                0.016   testican 3 isoform 2 
RECK                  0.016   RECK protein precursor 
ITGB7                 0.011   integrin, beta 7 
FSTL1                 0.011   follistatin-like 1 precursor 
ATP2B3                0.011   plasma membrane calcium ATPase 3 isoform 3b 
ATP2B3                0.011   plasma membrane calcium ATPase 3 isoform 3a 
SMOC1                 0.011   secreted modular calcium-binding protein 1 isoform 1...
SMOC1                 0.011   secreted modular calcium-binding protein 1 isoform 2...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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