Guide to the Human Genome
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Name: SPINK5 Sequence: fasta or formatted (1064aa) NCBI GI: 74027261
Description:

serine peptidase inhibitor, Kazal type 5 isoform b precursor

Referenced in:

Protease Inhibitors

Other entries for this name:
alt prot [1094aa] serine peptidase inhibitor, Kazal type 5 isoform a precursor
alt prot [916aa] serine peptidase inhibitor, Kazal type 5 isoform c precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         71           2
 C cysteine            6.1         65           1
 D aspartate           5.5         59           2
 E glutamate          11.6        123           4
 F phenylalanine       3.5         37           2
 G glycine             7.0         75           5
 H histidine           1.8         19           1
 I isoleucine          2.5         27           1
 K lysine             10.6        113           4
 L leucine             4.7         50           2
 M methionine          2.5         27           1
 N asparagine          6.3         67           2
 P proline             3.9         41           2
 Q glutamine           3.7         39           2
 R arginine            8.3         88           2
 S serine              5.9         63           3
 T threonine           4.4         47           2
 V valine              3.0         32           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.0         21           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine peptidase inhibitor, Kazal type 5 isoform b p... 
SPINK5                0.993   serine peptidase inhibitor, Kazal type 5 isoform a ...
SPINK5                0.854   serine peptidase inhibitor, Kazal type 5 isoform c ...
AGRN                  0.023   agrin 
TCHH                  0.015   trichohyalin 
NEXN                  0.015   nexilin (F actin binding protein) 
LOC100286959          0.014   PREDICTED: hypothetical protein XP_002343921 
LOC440243             0.013   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC727832             0.012   golgi autoantigen, golgin subfamily a-like 
SPINK1                0.012   serine protease inhibitor, Kazal type 1 precursor [H...
LOC645202             0.012   PREDICTED: hypothetical protein LOC645202 
CDC2L1                0.012   cell division cycle 2-like 1 (PITSLRE proteins) isof...
SPINK6                0.012   serine protease inhibitor, Kazal type 6 
LOC283767             0.011   golgi autoantigen, golgin subfamily a-like 
NSBP1                 0.011   nucleosomal binding protein 1 
LOC283685             0.011   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CDC2L1                0.011   cell division cycle 2-like 1 (PITSLRE proteins) isof...
TMEFF1                0.011   transmembrane protein with EGF-like and two follista...
LOC283685             0.010   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CDC2L2                0.010   cell division cycle 2-like 2 isoform 1 
LOC100131202          0.010   PREDICTED: hypothetical protein 
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
SPINK5L2              0.010   Kazal type serine protease inhibitor 5-like 2 
ATRX                  0.010   transcriptional regulator ATRX isoform 2 
ATRX                  0.010   transcriptional regulator ATRX isoform 1 
CDC2L2                0.010   cell division cycle 2-like 2 isoform 4 
LOC100133599          0.010   PREDICTED: hypothetical protein 
TMEFF2                0.009   transmembrane protein with EGF-like and two follista...
SPINK9                0.009   serine peptidase inhibitor, Kazal type 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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