Guide to the Human Genome
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Name: SPINK5L2 Sequence: fasta or formatted (97aa) NCBI GI: 47679099
Description:

Kazal type serine protease inhibitor 5-like 2

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.0          1           1
 C cysteine            6.2          6           1
 D aspartate           2.1          2           1
 E glutamate           2.1          2           1
 F phenylalanine       5.2          5           1
 G glycine             7.2          7           1
 H histidine           4.1          4           1
 I isoleucine          8.2          8           2
 K lysine              6.2          6           1
 L leucine             9.3          9           2
 M methionine          1.0          1           1
 N asparagine          5.2          5           1
 P proline             9.3          9           2
 Q glutamine           1.0          1           1
 R arginine            4.1          4           1
 S serine              9.3          9           2
 T threonine           3.1          3           1
 V valine              7.2          7           1
 W tryptophan          3.1          3           2
 Y tyrosine            5.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Kazal type serine protease inhibitor 5-like 2 
SPINK7                0.224   esophagus cancer-related gene-2 
SPINK5L3              0.130   serine PI Kazal type 5-like 3 
SPINK5                0.115   serine peptidase inhibitor, Kazal type 5 isoform c ...
SPINK5                0.115   serine peptidase inhibitor, Kazal type 5 isoform b p...
SPINK5                0.115   serine peptidase inhibitor, Kazal type 5 isoform a ...
SPINK9                0.115   serine peptidase inhibitor, Kazal type 9 
SPINK1                0.104   serine protease inhibitor, Kazal type 1 precursor [H...
SPINK2                0.089   serine protease inhibitor, Kazal type 2 (acrosin-try...
SPINK4                0.089   serine peptidase inhibitor, Kazal type 4 
SPINK6                0.073   serine protease inhibitor, Kazal type 6 
SPINK8                0.073   serine peptidase inhibitor, Kazal type 8 (putative)...
AGRN                  0.068   agrin 
SLCO1B1               0.057   solute carrier organic anion transporter family, me...
SLCO5A1               0.057   solute carrier organic anion transporter family, me...
SLCO5A1               0.057   solute carrier organic anion transporter family, me...
SLCO5A1               0.057   solute carrier organic anion transporter family, me...
LST-3TM12             0.052   liver-specific organic anion transporter 3TM12 [Hom...
SLCO1B3               0.047   solute carrier organic anion transporter family, memb...
TMEFF2                0.042   transmembrane protein with EGF-like and two follista...
FSTL1                 0.036   follistatin-like 1 precursor 
TMEFF1                0.031   transmembrane protein with EGF-like and two follista...
SLCO1C1               0.021   solute carrier organic anion transporter family, me...
SLCO1C1               0.021   solute carrier organic anion transporter family, me...
SLCO1C1               0.021   solute carrier organic anion transporter family, me...
SLCO1C1               0.021   solute carrier organic anion transporter family, memb...
FST                   0.016   follistatin isoform FST317 precursor 
FST                   0.016   follistatin isoform FST344 precursor 
SFT2D2                0.016   SFT2 domain containing 2 
RECK                  0.016   RECK protein precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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