Guide to the Human Genome
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Name: KLHDC8A Sequence: fasta or formatted (350aa) NCBI GI: 8922640
Description:

kelch domain containing 8A

Referenced in:

Kelch Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         29           2
 C cysteine            2.0          7           1
 D aspartate           4.9         17           2
 E glutamate           4.3         15           1
 F phenylalanine       4.0         14           2
 G glycine             9.1         32           2
 H histidine           1.4          5           1
 I isoleucine          3.1         11           1
 K lysine              5.7         20           2
 L leucine             9.4         33           2
 M methionine          4.0         14           1
 N asparagine          3.4         12           1
 P proline             5.7         20           1
 Q glutamine           3.1         11           1
 R arginine            6.9         24           2
 S serine              6.0         21           2
 T threonine           4.3         15           1
 V valine              8.6         30           2
 W tryptophan          2.0          7           1
 Y tyrosine            3.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kelch domain containing 8A 
KLHDC8B               0.452   kelch domain containing 8B 
KLHL8                 0.126   kelch-like 8 
KLHL12                0.117   kelch-like 12 
IPP                   0.113   intracisternal A particle-promoted polypeptide isofor...
IVNS1ABP              0.110   influenza virus NS1A binding protein 
KLHL1                 0.108   kelch-like 1 protein 
KLHL5                 0.104   kelch-like 5 isoform 3 
KLHL5                 0.104   kelch-like 5 isoform 2 
KLHL5                 0.104   kelch-like 5 isoform 1 
KLHL20                0.103   kelch-like 20 
KLHL25                0.100   BTB/POZ KELCH domain protein 
ENC1                  0.097   ectodermal-neural cortex (with BTB-like domain) [Homo...
IPP                   0.097   intracisternal A particle-promoted polypeptide isof...
KLHL29                0.095   PREDICTED: kelch-like 29 (Drosophila) 
KLHL29                0.095   PREDICTED: kelch repeat and BTB (POZ) domain contai...
KLHL18                0.095   kelch-like 18 
KLHL17                0.094   kelch-like 17 
KLHL2                 0.091   kelch-like 2, Mayven isoform 3 
KLHL2                 0.091   kelch-like 2, Mayven isoform 2 
KLHL2                 0.091   kelch-like 2, Mayven isoform 1 
KEAP1                 0.090   kelch-like ECH-associated protein 1 
KEAP1                 0.090   kelch-like ECH-associated protein 1 
KLHL10                0.090   kelch-like 10 
KLHL3                 0.090   kelch-like 3 
KLHL4                 0.088   kelch-like 4 isoform 1 
KLHL4                 0.088   kelch-like 4 isoform 2 
KLHL36                0.087   kelch-like 36 
KLHL28                0.084   BTB (POZ) domain containing 5 
KLHL34                0.079   kelch-like 34 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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