Guide to the Human Genome
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Name: KLHDC9 Sequence: fasta or formatted (111aa) NCBI GI: 55956892
Description:

kelch/ankyrin repeat containing cyclin A1 interacting protein isoform c

Referenced in:

Ankyrin Family
Cyclins and Related Functions
Kelch Family

Other entries for this name:
alt prot [349aa] kelch/ankyrin repeat containing cyclin A1 interacting protein iso...
alt prot [288aa] kelch/ankyrin repeat containing cyclin A1 interacting protein iso...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          5           1
 C cysteine            4.5          5           1
 D aspartate           6.3          7           1
 E glutamate           2.7          3           1
 F phenylalanine       5.4          6           1
 G glycine            11.7         13           2
 H histidine           4.5          5           2
 I isoleucine          3.6          4           1
 K lysine              1.8          2           1
 L leucine             9.9         11           1
 M methionine          2.7          3           1
 N asparagine          1.8          2           1
 P proline             5.4          6           2
 Q glutamine           4.5          5           1
 R arginine            8.1          9           1
 S serine              6.3          7           2
 T threonine           6.3          7           1
 V valine              5.4          6           2
 W tryptophan          1.8          2           1
 Y tyrosine            2.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kelch/ankyrin repeat containing cyclin A1 interactin... 
KLHDC9                1.000   kelch/ankyrin repeat containing cyclin A1 interactin...
KLHDC2                0.042   kelch domain containing 2 
KLHDC3                0.037   kelch domain containing 3 
ATRNL1                0.032   attractin-like 1 
KLHL36                0.032   kelch-like 36 
ATRN                  0.032   attractin isoform 2 
ATRN                  0.032   attractin isoform 1 
KLHDC4                0.028   kelch domain containing 4 
LZTR1                 0.023   leucine-zipper-like transcription regulator 1 
MEGF8                 0.019   multiple EGF-like-domains 8 
KLHL9                 0.014   kelch-like 9 
KLHL14                0.014   kelch-like 14 
GRIK4                 0.014   glutamate receptor KA1 precursor 
KLHL1                 0.014   kelch-like 1 protein 
KLHL25                0.009   BTB/POZ KELCH domain protein 
KLHDC1                0.009   kelch domain containing 1 
SH2B1                 0.009   SH2B adaptor protein 1 isoform 2 
KLHL33                0.009   kelch-like 33 
SH2B1                 0.009   SH2B adaptor protein 1 isoform 3 
SH2B1                 0.009   SH2B adaptor protein 1 isoform 2 
SH2B1                 0.009   SH2B adaptor protein 1 isoform 1 
SH2B1                 0.009   SH2B adaptor protein 1 isoform 2 
KLHL15                0.009   kelch-like 15 
KLHL12                0.009   kelch-like 12 
KLHL24                0.005   DRE1 protein 
E4F1                  0.005   p120E4F 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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