Guide to the Human Genome
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Name: LCMT2 Sequence: fasta or formatted (686aa) NCBI GI: 25188199
Description:

leucine carboxyl methyltransferase 2

Referenced in:

Additional Protein Modifications
tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         66           3
 C cysteine            2.3         16           2
 D aspartate           3.6         25           2
 E glutamate           6.6         45           2
 F phenylalanine       5.1         35           2
 G glycine             8.3         57           4
 H histidine           3.5         24           1
 I isoleucine          3.1         21           1
 K lysine              1.6         11           1
 L leucine            11.5         79           4
 M methionine          1.0          7           1
 N asparagine          2.5         17           2
 P proline             5.7         39           2
 Q glutamine           4.2         29           2
 R arginine            7.3         50           3
 S serine              8.2         56           3
 T threonine           4.5         31           2
 V valine              7.0         48           2
 W tryptophan          1.9         13           1
 Y tyrosine            2.5         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucine carboxyl methyltransferase 2 
LCMT1                 0.112   leucine carboxyl methyltransferase 1 isoform a [Homo...
LCMT1                 0.076   leucine carboxyl methyltransferase 1 isoform b [Homo...
KLHDC3                0.015   kelch domain containing 3 
ATRNL1                0.011   attractin-like 1 
KLHDC9                0.011   kelch/ankyrin repeat containing cyclin A1 interactin...
KLHDC9                0.011   kelch/ankyrin repeat containing cyclin A1 interactin...
HCFC1                 0.010   host cell factor 1 
MEGF8                 0.010   multiple EGF-like-domains 8 
HCFC2                 0.010   host cell factor C2 
RABEPK                0.010   Rab9 effector protein with kelch motifs 
KLHDC2                0.008   kelch domain containing 2 
KLHDC10               0.007   kelch domain containing 10 
KLHL15                0.005   kelch-like 15 
KLHL33                0.005   kelch-like 33 
LZTR1                 0.004   leucine-zipper-like transcription regulator 1 
KLHL11                0.004   kelch-like 11 
LOC285679             0.004   hypothetical protein LOC285679 
KLHL14                0.004   kelch-like 14 
ROR1                  0.004   receptor tyrosine kinase-like orphan receptor 1 iso...
KLHDC8A               0.004   kelch domain containing 8A 
HDAC7                 0.004   histone deacetylase 7 isoform d 
HDAC7                 0.004   histone deacetylase 7 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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