Guide to the Human Genome
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Name: SPAG7 Sequence: fasta or formatted (227aa) NCBI GI: 118344454
Description:

sperm associated antigen 7

Referenced in:

Testes and Sperm

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         19           2
 C cysteine            0.9          2           1
 D aspartate           6.6         15           3
 E glutamate          11.9         27           3
 F phenylalanine       3.1          7           1
 G glycine             4.8         11           1
 H histidine           1.3          3           1
 I isoleucine          4.0          9           1
 K lysine             11.5         26           3
 L leucine             6.6         15           2
 M methionine          3.1          7           1
 N asparagine          1.8          4           1
 P proline             4.4         10           2
 Q glutamine           7.0         16           2
 R arginine            7.5         17           2
 S serine              7.5         17           2
 T threonine           2.2          5           1
 V valine              4.8         11           3
 W tryptophan          0.4          1           1
 Y tyrosine            2.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sperm associated antigen 7 
TTN                   0.040   titin isoform N2-A 
NFX1                  0.035   nuclear transcription factor, X-box binding 1 isofor...
ARPP-21               0.031   cyclic AMP-regulated phosphoprotein, 21 kD isoform 1...
RYR1                  0.028   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.028   skeletal muscle ryanodine receptor isoform 1 
GIGYF2                0.028   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.028   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.028   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.028   GRB10 interacting GYF protein 2 isoform b 
RABGAP1               0.028   RAB GTPase activating protein 1 
WDR87                 0.026   NYD-SP11 protein 
TNIK                  0.026   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.026   TRAF2 and NCK interacting kinase isoform 5 
R3HDM1                0.026   R3H domain containing 1 
INCENP                0.026   inner centromere protein antigens 135/155kDa isofor...
DDX46                 0.024   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
INCENP                0.024   inner centromere protein antigens 135/155kDa isofor...
TP53TG5               0.024   TP53-target gene 5 protein 
LOC400352             0.024   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.024   PREDICTED: similar to Putative golgin subfamily A m...
TCHH                  0.024   trichohyalin 
CGNL1                 0.024   cingulin-like 1 
SOX6                  0.021   SRY (sex determining region Y)-box 6 isoform 4 [Hom...
SOX6                  0.021   SRY (sex determining region Y)-box 6 isoform 3 [Hom...
SOX6                  0.021   SRY (sex determining region Y)-box 6 isoform 1 [Homo...
SOX6                  0.021   SRY (sex determining region Y)-box 6 isoform 2 [Homo...
MYH9                  0.021   myosin, heavy polypeptide 9, non-muscle 
LOC100133599          0.021   PREDICTED: hypothetical protein 
LOC100133758          0.021   PREDICTED: hypothetical protein, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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