SMAGP 35621

Name: SMAGP	Sequence: fasta or formatted (97aa)		NCBI GI: 76496487
Description: small trans-membrane and glycosylated protein		Not currently referenced in the text
Other entries for this name: alt mRNA {97aa} small trans-membrane and glycosylated protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 6 1 C cysteine 0.0 0 0 D aspartate 2.1 2 1 E glutamate 11.3 11 2 F phenylalanine 4.1 4 2 G glycine 4.1 4 1 H histidine 0.0 0 0 I isoleucine 7.2 7 1 K lysine 4.1 4 1 L leucine 12.4 12 2 M methionine 3.1 3 1 N asparagine 1.0 1 1 P proline 7.2 7 1 Q glutamine 2.1 2 1 R arginine 1.0 1 1 S serine 9.3 9 1 T threonine 11.3 11 2 V valine 8.2 8 2 W tryptophan 0.0 0 0 Y tyrosine 5.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small trans-membrane and glycosylated protein SMAGP 1.000 small trans-membrane and glycosylated protein CADM2 0.178 immunoglobulin superfamily, member 4D CADM1 0.110 immunoglobulin superfamily, member 4D isoform 1 [Ho... CADM3 0.110 cell adhesion molecule 3 isoform 2 CADM3 0.110 cell adhesion molecule 3 isoform 1 CADM1 0.092 immunoglobulin superfamily, member 4D isoform 2 [Ho... GYPC 0.092 glycophorin C isoform 1 GYPC 0.086 glycophorin C isoform 2 CNTNAP2 0.061 cell recognition molecule Caspr2 precursor EDAR 0.049 ectodysplasin A receptor precursor CADM4 0.031 cell adhesion molecule 4 TIMD4 0.031 T-cell immunoglobulin and mucin domain containing 4... TIMD4 0.031 T-cell immunoglobulin and mucin domain containing 4... CNTNAP1 0.025 contactin associated protein 1 precursor PTPRE 0.018 protein tyrosine phosphatase, receptor type, E isofor... GPNMB 0.018 glycoprotein (transmembrane) nmb isoform a precursor... GPNMB 0.018 glycoprotein (transmembrane) nmb isoform b precursor ... CATSPER2 0.018 sperm-associated cation channel 2 isoform 2 CATSPER2 0.018 sperm-associated cation channel 2 isoform 1 LOC100289232 0.012 PREDICTED: hypothetical protein XP_002343935 DDR2 0.012 discoidin domain receptor family, member 2 precursor... DDR2 0.012 discoidin domain receptor family, member 2 precursor... XKR3 0.012 X Kell blood group precursor-related family, member... SCN5A 0.012 voltage-gated sodium channel type V alpha isoform f... SCN5A 0.012 voltage-gated sodium channel type V alpha isoform e... SCN5A 0.012 voltage-gated sodium channel type V alpha isoform a ... SCN5A 0.012 voltage-gated sodium channel type V alpha isoform b ... SCN5A 0.012 voltage-gated sodium channel type V alpha isoform d... SCN5A 0.012 voltage-gated sodium channel type V alpha isoform c... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.