Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 76253859
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|76253859 hypothetical protein LOC112703 [Homo sapiens]
(231 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|76253859 hypothetical protein LOC112703 [Homo sapiens] 472 e-133
gi|23957696 hypothetical protein LOC149647 [Homo sapiens] 106 1e-23
gi|222418633 family with sequence similarity 71, member B [Homo ... 98 5e-21
gi|23503301 hypothetical protein LOC196472 [Homo sapiens] 98 7e-21
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 92 4e-19
gi|89363024 hypothetical protein LOC161142 [Homo sapiens] 82 3e-16
gi|193083150 hypothetical protein LOC346653 isoform b [Homo sapi... 67 1e-11
gi|14211935 testes development-related NYD-SP18 [Homo sapiens] 65 4e-11
gi|149192824 hypothetical protein LOC346653 isoform a [Homo sapi... 59 3e-09
gi|239752265 PREDICTED: hypothetical protein XP_002348186 [Homo ... 38 0.008
gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo ... 35 0.054
gi|206597502 NESH protein isoform 2 [Homo sapiens] 35 0.054
gi|7705981 NESH protein isoform 1 [Homo sapiens] 35 0.054
gi|9945318 MAX binding protein [Homo sapiens] 32 0.35
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 32 0.35
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 32 0.46
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 32 0.46
gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens] 32 0.46
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 32 0.46
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 32 0.60
gi|239752263 PREDICTED: hypothetical protein XP_002348185 [Homo ... 32 0.60
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 32 0.60
gi|239747673 PREDICTED: doublecortin domain-containing protein E... 32 0.60
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 32 0.60
gi|239741542 PREDICTED: doublecortin domain-containing protein E... 32 0.60
gi|46391104 hypothetical protein LOC83541 [Homo sapiens] 32 0.60
gi|108389127 hypothetical protein LOC83541 [Homo sapiens] 32 0.60
gi|13937401 hypothetical protein LOC83541 [Homo sapiens] 32 0.60
gi|30089966 CDC42 effector protein 5 [Homo sapiens] 31 0.78
gi|153792074 proline rich 12 [Homo sapiens] 31 0.78
>gi|76253859 hypothetical protein LOC112703 [Homo sapiens]
Length = 231
Score = 472 bits (1214), Expect = e-133
Identities = 231/231 (100%), Positives = 231/231 (100%)
Query: 1 MGPPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDG 60
MGPPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDG
Sbjct: 1 MGPPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDG 60
Query: 61 DIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPRRLQRYLQSGEFDQFRDFPIFESNFVQ 120
DIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPRRLQRYLQSGEFDQFRDFPIFESNFVQ
Sbjct: 61 DIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPRRLQRYLQSGEFDQFRDFPIFESNFVQ 120
Query: 121 VTRLGEVANEVTMGVAASSPALELPDLLLLAGPAKENGHLQLFGLFPLKFVQLFVHDKSR 180
VTRLGEVANEVTMGVAASSPALELPDLLLLAGPAKENGHLQLFGLFPLKFVQLFVHDKSR
Sbjct: 121 VTRLGEVANEVTMGVAASSPALELPDLLLLAGPAKENGHLQLFGLFPLKFVQLFVHDKSR 180
Query: 181 CQLEVKLNTSRTFYLQLRAPLKTRDREFGQWVRLLYRLRFLSASAVPFTQE 231
CQLEVKLNTSRTFYLQLRAPLKTRDREFGQWVRLLYRLRFLSASAVPFTQE
Sbjct: 181 CQLEVKLNTSRTFYLQLRAPLKTRDREFGQWVRLLYRLRFLSASAVPFTQE 231
>gi|23957696 hypothetical protein LOC149647 [Homo sapiens]
Length = 594
Score = 106 bits (265), Expect = 1e-23
Identities = 64/149 (42%), Positives = 86/149 (57%), Gaps = 24/149 (16%)
Query: 95 RLQRYLQSGEFDQFRDFPIFESNFVQVTRLGEVANE------VTMGVAASSPALELPDLL 148
+LQR L GE+D F+ PIFES+F+Q+T+ GEV + VTMG+A +SP L LPD++
Sbjct: 27 KLQRQLYKGEYDIFKYAPIFESDFIQITKRGEVIDVHNRVRMVTMGIARTSPILPLPDVM 86
Query: 149 LLAGPA------------------KENGHLQLFGLFPLKFVQLFVHDKSRCQLEVKLNTS 190
LLA PA K +L+L L PL+FV++ V D + QL +K T
Sbjct: 87 LLARPATGCEEYAGHGQATKRKKRKAAKNLELTRLLPLRFVRISVQDHEKQQLRLKFATG 146
Query: 191 RTFYLQLRAPLKTRDREFGQWVRLLYRLR 219
R+ YLQL L TRD F W +L+Y LR
Sbjct: 147 RSCYLQLCPALDTRDDLFAYWEKLIYLLR 175
>gi|222418633 family with sequence similarity 71, member B [Homo
sapiens]
Length = 605
Score = 98.2 bits (243), Expect = 5e-21
Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 25/149 (16%)
Query: 96 LQRYLQS-GEFDQFRDFPIFESNFVQVTRLGEVANE------VTMGVAASSPALELPDLL 148
LQR L + GE++ F+ P+FESNF+Q+ + GEV + VT+G+ +SP L LPD++
Sbjct: 28 LQRQLYNRGEYNIFKYAPMFESNFIQINKKGEVIDVHNRVRMVTVGIVCTSPILPLPDVM 87
Query: 149 LLAGP-------------AKENGH-----LQLFGLFPLKFVQLFVHDKSRCQLEVKLNTS 190
+LA P AK G L+L L PLKFV++ +HD + QL +KL T
Sbjct: 88 VLAQPTKICEQHVRWGRFAKGRGRRPVKTLELTRLLPLKFVKISIHDHEKQQLRLKLATG 147
Query: 191 RTFYLQLRAPLKTRDREFGQWVRLLYRLR 219
RTFYLQL TR+ F W +L+Y LR
Sbjct: 148 RTFYLQLCPSSDTREDLFCYWEKLVYLLR 176
>gi|23503301 hypothetical protein LOC196472 [Homo sapiens]
Length = 241
Score = 97.8 bits (242), Expect = 7e-21
Identities = 60/148 (40%), Positives = 83/148 (56%), Gaps = 23/148 (15%)
Query: 95 RLQRYLQSGEFDQFRDFPIFESNFVQVTRLGEV------ANEVTMGVAASSPALELPDLL 148
+LQR L GE+ FR P+FES+F+Q+++ GEV A VTMG+ +SP L LPD++
Sbjct: 27 KLQRQLYKGEYTIFRYAPMFESDFIQISKRGEVIDVHNRARMVTMGIVRTSPCLTLPDVM 86
Query: 149 LLAGPAK--ENGH---------------LQLFGLFPLKFVQLFVHDKSRCQLEVKLNTSR 191
LLA PA +N L+L L PL FV++ +H+ + QL +KL T R
Sbjct: 87 LLARPAAVCDNARCGPATQKRESPPAEILELTRLLPLMFVKITIHNSVKKQLHLKLATGR 146
Query: 192 TFYLQLRAPLKTRDREFGQWVRLLYRLR 219
+FYLQL P + F W L+Y LR
Sbjct: 147 SFYLQLCPPSDASEDLFVHWENLVYILR 174
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 92.0 bits (227), Expect = 4e-19
Identities = 60/142 (42%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 96 LQRYLQSGEFDQFRDFPIFESNFVQVTRLG------EVANEVTMGVAASSPALELPDLLL 149
LQ+ LQ GE+ R P+FESNFVQVT G N + MGVAAS P L LPD+LL
Sbjct: 26 LQKTLQKGEYLPLRPLPMFESNFVQVTHQGGPVFVNHRTNRLAMGVAASLPGLVLPDILL 85
Query: 150 LAGPAKEN--GHLQLFGLFPLKFVQLFVHDKSRCQLEVKLNTSRTFYLQLRAPLKTRDRE 207
+ PA++ L L + PL V L VHD S +L+++L + R +YL L AP
Sbjct: 86 IGQPAEDRDCSGLVLTRMIPLDLVHLCVHDLSAWRLKLRLVSGRQYYLALDAPDNEVGFL 145
Query: 208 FGQWVRLLYRLRFLSASAVPFT 229
F WVRL+ L+ + + P T
Sbjct: 146 FHCWVRLINLLQEPAPTWTPRT 167
>gi|89363024 hypothetical protein LOC161142 [Homo sapiens]
Length = 422
Score = 82.4 bits (202), Expect = 3e-16
Identities = 56/146 (38%), Positives = 73/146 (50%), Gaps = 23/146 (15%)
Query: 93 PRRLQRYLQSGEFDQFRDFPIFESNFVQVTRLGEV------ANEVTMGVAASSPALELPD 146
PR LQ L GE+ F P+ ESNF+QV R GE AN VT+G+ SS ++P+
Sbjct: 26 PRDLQNMLDGGEYAPFVSPPMLESNFIQVNRRGESIYLHNRANWVTVGICFSSSTHKIPN 85
Query: 147 LLLLA----GPAKENG-------------HLQLFGLFPLKFVQLFVHDKSRCQLEVKLNT 189
++LLA G K+ L L PL+FV L VHD L+VKL +
Sbjct: 86 VMLLAHLTPGAQKDTETLFKSLLTSPPAEKLVLTRFLPLQFVTLSVHDAENMSLKVKLVS 145
Query: 190 SRTFYLQLRAPLKTRDREFGQWVRLL 215
R +YLQL +D F QWV L+
Sbjct: 146 GRAYYLQLCTSAYKQDTLFSQWVALI 171
>gi|193083150 hypothetical protein LOC346653 isoform b [Homo
sapiens]
Length = 300
Score = 67.0 bits (162), Expect = 1e-11
Identities = 47/138 (34%), Positives = 74/138 (53%), Gaps = 20/138 (14%)
Query: 96 LQRYLQSGEFDQFRDFPIFESNFVQVTRLG------EVANEVTMGVAASSPALELPDLLL 149
L + + S EF+ F + +FESNF+QVT+ G E + V +GV +S P+L LP++LL
Sbjct: 27 LCQLIHSPEFNLFSNSVVFESNFIQVTKPGNWRDVCEGSATVILGVTSSVPSLPLPNVLL 86
Query: 150 LAGPAKENGH------------LQLFGLFPLKFVQLFVHDKSRCQLEVKLNTSRTFYLQL 197
+A G + L L PLK+V+L ++D+ + L V+ T + +YL+L
Sbjct: 87 MANVTWPQGPFTTWSTPGDAPVINLSRLLPLKYVELRIYDRLQRILRVRTVTEKIYYLKL 146
Query: 198 RAPLKTRDREFGQWVRLL 215
K + F WVRL+
Sbjct: 147 HE--KHPEIVFQFWVRLV 162
>gi|14211935 testes development-related NYD-SP18 [Homo sapiens]
Length = 344
Score = 65.5 bits (158), Expect = 4e-11
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 23/160 (14%)
Query: 78 GEVEPGGMAASPTGRPRRLQRYLQSGEFDQFRDFPIFESNFVQVTR------LGEVANEV 131
GE PG G L R + S EF+ F D +FESNF+QV R + + +N +
Sbjct: 44 GEPNPGAGLGVEEGL---LCRVVHSPEFNLFLDSVVFESNFIQVKRGRNWRDVYKASNTM 100
Query: 132 TMGVAASSPALELPDLLLLAGPAKENGHLQLFG------------LFPLKFVQLFVHDKS 179
+GV +S P L LP++LL+A G Q + + PL+FV+L V D
Sbjct: 101 ALGVTSSVPCLPLPNILLMASVKWHQGQNQTWNRPSIAPNIFLKRILPLRFVELQVCDHY 160
Query: 180 RCQLEVKLNTSRTFYLQLRAPLKTRDREFGQWVRLLYRLR 219
+ L+++ T + +YL+L + F W+RL+ L+
Sbjct: 161 QRILQLRTVTEKIYYLKLHP--DHPETVFHFWIRLVQILQ 198
>gi|149192824 hypothetical protein LOC346653 isoform a [Homo
sapiens]
Length = 309
Score = 59.3 bits (142), Expect = 3e-09
Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 29/147 (19%)
Query: 96 LQRYLQSGEFDQFRDFPIFESNFVQ---------VTRLG------EVANEVTMGVAASSP 140
L + + S EF+ F + +FESNF+Q VT+ G E + V +GV +S P
Sbjct: 27 LCQLIHSPEFNLFSNSVVFESNFIQTHVPEADFQVTKPGNWRDVCEGSATVILGVTSSVP 86
Query: 141 ALELPDLLLLAGPAKENGH------------LQLFGLFPLKFVQLFVHDKSRCQLEVKLN 188
+L LP++LL+A G + L L PLK+V+L ++D+ + L V+
Sbjct: 87 SLPLPNVLLMANVTWPQGPFTTWSTPGDAPVINLSRLLPLKYVELRIYDRLQRILRVRTV 146
Query: 189 TSRTFYLQLRAPLKTRDREFGQWVRLL 215
T + +YL+L K + F WVRL+
Sbjct: 147 TEKIYYLKLHE--KHPEIVFQFWVRLV 171
>gi|239752265 PREDICTED: hypothetical protein XP_002348186 [Homo
sapiens]
Length = 225
Score = 37.7 bits (86), Expect = 0.008
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 9/95 (9%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTV--------RVVPPPRFLPLLLR 54
PP PD PPP S + P D + P P +V VV PPR P +
Sbjct: 71 PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPRSPDSVVPPPGSPDSVVLPPR-SPDSVV 129
Query: 55 PLPSDGDIAMRRDRGPKPALGGAGEVEPGGMAASP 89
P P D + R P + A + GG A SP
Sbjct: 130 PPPGSPDSVVLPPRSPDSVVPPARSPDSGGRAGSP 164
Score = 28.5 bits (62), Expect = 5.1
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 11/102 (10%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPL---PSD 59
PP PD PPP S + P D + P P + VV PPR ++ P S
Sbjct: 101 PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDS--VVLPPRSPDSVVPPARSPDSG 158
Query: 60 GDIAMRRDRGPKPAL------GGAGEVEPGGMAASPTGRPRR 95
G R P A G AG +A SP P R
Sbjct: 159 GRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSR 200
>gi|239746776 PREDICTED: hypothetical protein XP_002343846 [Homo
sapiens]
Length = 210
Score = 35.0 bits (79), Expect = 0.054
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDGDI 62
P PD PPP S + P D + P P + VV PPR P + P P D
Sbjct: 66 PSRSPDSVVPPPGSPDSVVPPPRSPDSVVPPPGSPDS--VVLPPR-SPDSVVPPPGSPDS 122
Query: 63 AMRRDRGPKPALGGAGEVEPGGMAASP 89
+ R P + A + GG A SP
Sbjct: 123 VVLPPRSPDSVVPPARSPDSGGRAGSP 149
Score = 28.5 bits (62), Expect = 5.1
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 11/102 (10%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPL---PSD 59
PP PD PPP S + P D + P P + VV PPR ++ P S
Sbjct: 86 PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDS--VVLPPRSPDSVVPPARSPDSG 143
Query: 60 GDIAMRRDRGPKPAL------GGAGEVEPGGMAASPTGRPRR 95
G R P A G AG +A SP P R
Sbjct: 144 GRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSR 185
>gi|206597502 NESH protein isoform 2 [Homo sapiens]
Length = 360
Score = 35.0 bits (79), Expect = 0.054
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDGDI 62
PPL L PPPP + P + + P P + +P P LP P P DGD
Sbjct: 229 PPLPSSLDPPPPPAAVEVFQRPPTLEELSPPPPDE----ELPLPLDLP---PPPPLDGD- 280
Query: 63 AMRRDRGPKPALGGAGEVEPGGMAAS 88
+ G P G G EP + AS
Sbjct: 281 ----ELGLPPPPPGFGPDEPSWVPAS 302
>gi|7705981 NESH protein isoform 1 [Homo sapiens]
Length = 366
Score = 35.0 bits (79), Expect = 0.054
Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 12/86 (13%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDGDI 62
PPL L PPPP + P + + P P + +P P LP P P DGD
Sbjct: 235 PPLPSSLDPPPPPAAVEVFQRPPTLEELSPPPPDE----ELPLPLDLP---PPPPLDGD- 286
Query: 63 AMRRDRGPKPALGGAGEVEPGGMAAS 88
+ G P G G EP + AS
Sbjct: 287 ----ELGLPPPPPGFGPDEPSWVPAS 308
>gi|9945318 MAX binding protein [Homo sapiens]
Length = 582
Score = 32.3 bits (72), Expect = 0.35
Identities = 33/95 (34%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDGDI 62
PPL P PPP + +P VI P P + + +PPP LP +PLP +
Sbjct: 63 PPL-PLSPPAPPPAPPPPLATPAPLTVI-PIPVVTNSPQPLPPPPPLPAAAQPLP----L 116
Query: 63 AMRRDRGPKPALGGAGEVEPGGMAASPTGRPRRLQ 97
A R +PAL GA PG P P R Q
Sbjct: 117 APR-----QPALVGA----PGLSIKEPAPLPSRPQ 142
Score = 30.0 bits (66), Expect = 1.7
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 4 PLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVV----PPPRFLPLLLRP 55
PL PD + PP S + PL V+ APH V ++ PPP L L P
Sbjct: 148 PLLPDSKATIPPNGSPKPLQPLPTPVLTIAPHPGVQPQLAPQQPPPPTLGTLKLAP 203
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 32.3 bits (72), Expect = 0.35
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Query: 2 GPPLWPDLQEPPPP--GTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSD 59
GPP P E PPP G SQ P +P P PPP P RP P
Sbjct: 91 GPPPHPGKPERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKP--ERPPPQG 148
Query: 60 GDIAMRRDRGPKPALGGAGEVEP-----GGMAASPTGRPR 94
G+ + +GP P G P A SP G+P+
Sbjct: 149 GN----QSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQ 184
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 32.0 bits (71), Expect = 0.46
Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDV-----IKPAPHHDVTVRVVPPPRFLP----LLL 53
PPL D PPPP + P + I P P + R+ PPP LP +
Sbjct: 634 PPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPP 693
Query: 54 RPLPSDGDIAMRRDRGPKPALGGAGEVEPGGMAASP 89
P P G+ M P P GG G P P
Sbjct: 694 PPPPLPGEAGM--PPPPPPLPGGPGIPPPPPFPGGP 727
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 32.0 bits (71), Expect = 0.46
Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDV-----IKPAPHHDVTVRVVPPPRFLP----LLL 53
PPL D PPPP + P + I P P + R+ PPP LP +
Sbjct: 643 PPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPP 702
Query: 54 RPLPSDGDIAMRRDRGPKPALGGAGEVEPGGMAASP 89
P P G+ M P P GG G P P
Sbjct: 703 PPPPLPGEAGM--PPPPPPLPGGPGIPPPPPFPGGP 736
>gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]
Length = 533
Score = 32.0 bits (71), Expect = 0.46
Identities = 35/128 (27%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 7 PDLQEPP-PPGTSSQIRSPLLCDVIKPAPHH------------DVTVRVVPPPRFLPLLL 53
P +Q+PP PP T RS L P P H DV R +P P LP+
Sbjct: 280 PKIQKPPLPPTTERHERSSPLPGKKPPVPKHGWGPDRRENDEDDVHQRPLPQPALLPMSS 339
Query: 54 RPLPSDGDIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPR--RLQRYLQSGEFD----- 106
PS R P P PG + S + P+ L Y G +
Sbjct: 340 NTFPS-------RSTKPSPMNPLPSSHMPGAFSESNSSFPQSASLPPYFSQGPSNRPPIR 392
Query: 107 -QFRDFPI 113
+ R+FP+
Sbjct: 393 AEGRNFPL 400
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 32.0 bits (71), Expect = 0.46
Identities = 24/87 (27%), Positives = 31/87 (35%), Gaps = 7/87 (8%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDGDI 62
PP P PPPP T +V+ AP T P P P + D+
Sbjct: 730 PPSPPPSYHPPPPPTKKP-------EVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQDL 782
Query: 63 AMRRDRGPKPALGGAGEVEPGGMAASP 89
+M P+ A EP G + SP
Sbjct: 783 SMADFPPPEEAFFSVASPEPAGPSGSP 809
Score = 28.9 bits (63), Expect = 3.9
Identities = 33/116 (28%), Positives = 42/116 (36%), Gaps = 31/116 (26%)
Query: 2 GPPLWPDLQEPPPPGTSSQIRSP----------LLCDVIKPAPHHDVTVR---------V 42
GPP P +PP P + +RSP L PAP + V
Sbjct: 600 GPPASPGKAQPPKPERVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFV 659
Query: 43 VPPPRFLPLLLRPLPSDGDIAMRRDRGPKPALG--GAGEVEPGGMA---ASPTGRP 93
+PP +P P PS + R P PA A V PG ++ ASP P
Sbjct: 660 IPPHPKVPAPFSPPPS-------KPRSPNPAAPALAAPAVVPGPVSTTDASPQSPP 708
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 31.6 bits (70), Expect = 0.60
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDGDI 62
PP P L EPPPP + + P+L + + P PH + + PP F+P P P +
Sbjct: 171 PPPPPLLLEPPPPPSMAPPPPPVL-EALSP-PHTLSSPSIPTPPDFIP----PAPPLAFL 224
Query: 63 AMRRDRGPKPALGGAGEVEPGGMAASPTG 91
A P PA G P G
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPG 253
Score = 30.4 bits (67), Expect = 1.3
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 1 MGPPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPS 58
M PP P L+ PP T S P D I PAP + PPP +P P P+
Sbjct: 186 MAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAP---PLAFLAPPPPPVPAPAPPAPA 240
>gi|239752263 PREDICTED: hypothetical protein XP_002348185 [Homo
sapiens]
Length = 220
Score = 31.6 bits (70), Expect = 0.60
Identities = 30/87 (34%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDGDI 62
PP PD PPP RSP D + P P + VV PPR P + P P D
Sbjct: 86 PPGSPDSVVPPP-------RSP---DSVVPPPGSPDS--VVLPPR-SPDSVVPPPGSPDS 132
Query: 63 AMRRDRGPKPALGGAGEVEPGGMAASP 89
+ R P + A + GG A SP
Sbjct: 133 VVLPPRSPDSVVPPARSPDSGGRAGSP 159
Score = 28.5 bits (62), Expect = 5.1
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 11/102 (10%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPL---PSD 59
PP PD PPP S + P D + P P + VV PPR ++ P S
Sbjct: 96 PPRSPDSVVPPPGSPDSVVLPPRSPDSVVPPPGSPDS--VVLPPRSPDSVVPPARSPDSG 153
Query: 60 GDIAMRRDRGPKPAL------GGAGEVEPGGMAASPTGRPRR 95
G R P A G AG +A SP P R
Sbjct: 154 GRAGSPRSLAPPAAARAEGAPGWAGRWGRVPLARSPPQVPSR 195
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 31.6 bits (70), Expect = 0.60
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDGDI 62
PP P L EPPPP + + P+L + + P PH + + PP F+P P P +
Sbjct: 171 PPPPPLLLEPPPPPSMAPPPPPVL-EALSP-PHTLSSPSIPTPPDFIP----PAPPLAFL 224
Query: 63 AMRRDRGPKPALGGAGEVEPGGMAASPTG 91
A P PA G P G
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPG 253
Score = 30.4 bits (67), Expect = 1.3
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 1 MGPPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPS 58
M PP P L+ PP T S P D I PAP + PPP +P P P+
Sbjct: 186 MAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAP---PLAFLAPPPPPVPAPAPPAPA 240
>gi|239747673 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 714
Score = 31.6 bits (70), Expect = 0.60
Identities = 23/100 (23%), Positives = 32/100 (32%), Gaps = 8/100 (8%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLC--------DVIKPAPHHDVTVRVVPPPRFLPLLLR 54
P +W PP P + R PL C + P P+H R P +P
Sbjct: 28 PSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPV 87
Query: 55 PLPSDGDIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPR 94
P +A+ R P + + P G PR
Sbjct: 88 SCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPR 127
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 31.6 bits (70), Expect = 0.60
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPSDGDI 62
PP P L EPPPP + + P+L + + P PH + + PP F+P P P +
Sbjct: 171 PPPPPLLLEPPPPPSMAPPPPPVL-EALSP-PHTLSSPSIPTPPDFIP----PAPPLAFL 224
Query: 63 AMRRDRGPKPALGGAGEVEPGGMAASPTG 91
A P PA G P G
Sbjct: 225 APPPPPVPAPAPPAPASPHTVGTRLFPPG 253
Score = 30.4 bits (67), Expect = 1.3
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 1 MGPPLWPDLQEPPPPGTSSQIRSPLLCDVIKPAPHHDVTVRVVPPPRFLPLLLRPLPS 58
M PP P L+ PP T S P D I PAP + PPP +P P P+
Sbjct: 186 MAPPPPPVLEALSPPHTLSSPSIPTPPDFIPPAP---PLAFLAPPPPPVPAPAPPAPA 240
>gi|239741542 PREDICTED: doublecortin domain-containing protein
ENSP00000382097-like [Homo sapiens]
Length = 510
Score = 31.6 bits (70), Expect = 0.60
Identities = 23/100 (23%), Positives = 32/100 (32%), Gaps = 8/100 (8%)
Query: 3 PPLWPDLQEPPPPGTSSQIRSPLLC--------DVIKPAPHHDVTVRVVPPPRFLPLLLR 54
P +W PP P + R PL C + P P+H R P +P
Sbjct: 28 PSVWTSSPLPPRPSPARAPRCPLTCLRPVPRLTCLGSPLPNHLSLPRAACSPARVPRRPV 87
Query: 55 PLPSDGDIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPR 94
P +A+ R P + + P G PR
Sbjct: 88 SCPGPEPLALAARRSQSPRVASTRSLRPPGSPVPSPSSPR 127
>gi|46391104 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 31.6 bits (70), Expect = 0.60
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 8/115 (6%)
Query: 44 PPPRFLPLLLRPLPSDGDIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPRRLQRYLQSG 103
PPP P RP PS + R D P PA PG AAS RP LQR
Sbjct: 136 PPPATPP---RPPPSTSAVR-RVDVRPLPASPARPCPSPGPAAASSPARPPGLQR----S 187
Query: 104 EFDQFRDFPIFESNFVQVTRLGEVANEVTMGVAASSPALELPDLLLLAGPAKENG 158
+ D F ++ + + E G+ + A D++ LAGP+ G
Sbjct: 188 KSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPG 242
>gi|108389127 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 31.6 bits (70), Expect = 0.60
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 8/115 (6%)
Query: 44 PPPRFLPLLLRPLPSDGDIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPRRLQRYLQSG 103
PPP P RP PS + R D P PA PG AAS RP LQR
Sbjct: 136 PPPATPP---RPPPSTSAVR-RVDVRPLPASPARPCPSPGPAAASSPARPPGLQR----S 187
Query: 104 EFDQFRDFPIFESNFVQVTRLGEVANEVTMGVAASSPALELPDLLLLAGPAKENG 158
+ D F ++ + + E G+ + A D++ LAGP+ G
Sbjct: 188 KSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPG 242
>gi|13937401 hypothetical protein LOC83541 [Homo sapiens]
Length = 295
Score = 31.6 bits (70), Expect = 0.60
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 8/115 (6%)
Query: 44 PPPRFLPLLLRPLPSDGDIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPRRLQRYLQSG 103
PPP P RP PS + R D P PA PG AAS RP LQR
Sbjct: 136 PPPATPP---RPPPSTSAVR-RVDVRPLPASPARPCPSPGPAAASSPARPPGLQR----S 187
Query: 104 EFDQFRDFPIFESNFVQVTRLGEVANEVTMGVAASSPALELPDLLLLAGPAKENG 158
+ D F ++ + + E G+ + A D++ LAGP+ G
Sbjct: 188 KSDLSERFSRAAADLERFFNFCGLDPEEARGLGVAHLARASSDIVSLAGPSAGPG 242
>gi|30089966 CDC42 effector protein 5 [Homo sapiens]
Length = 148
Score = 31.2 bits (69), Expect = 0.78
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
Query: 44 PPPRFLPLLLRPLPSDGDIAMRRDRGPK---PALGGAGEVEPGGMAASPTGRPR 94
PPP +P P P+D ++ D GP LG P AA P PR
Sbjct: 71 PPPPAVPQSAAPSPADPLLSFHLDLGPSMLDAVLGVMDAARPEAAAAKPDAEPR 124
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 31.2 bits (69), Expect = 0.78
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 20/104 (19%)
Query: 10 QEPPPPGTSSQIRSPLLCDVIKPAPHHDV-TVRVVPPPRFLPLLLRPLPSDGDIAMR--- 65
+ PPPP ++Q P ++ A D+ V PPP+ LP +L PS A +
Sbjct: 762 KSPPPPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGV 821
Query: 66 -------RDRGPKPALGGAGEVEPGGMAASPTGRPRRLQRYLQS 102
RD P+P P P P +L+ +L+S
Sbjct: 822 HLLEPATRDGAPQP---------PPPPPPPPPPMPLQLEAHLRS 856
Score = 28.1 bits (61), Expect = 6.6
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 14/105 (13%)
Query: 2 GPPLWPDLQEPPPPGTSSQIRSPLLCDVIKPA---PHHDVTVRVVPPPRFLPLL--LRPL 56
G P P PPPP Q+ + L ++PA P + PP LL L PL
Sbjct: 831 GAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPL 890
Query: 57 -PSDGDIAMRRDRGPKPALGGAGEVEPGGMAASPTGRPRRLQRYL 100
P+ GD + GP + G +P G SP+ + + R++
Sbjct: 891 PPAPGDTGV----GPPNSEG----KDPAGAYRSPSPQGTKAPRFV 927
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.141 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,133,102
Number of Sequences: 37866
Number of extensions: 638813
Number of successful extensions: 2762
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 2596
Number of HSP's gapped (non-prelim): 225
length of query: 231
length of database: 18,247,518
effective HSP length: 99
effective length of query: 132
effective length of database: 14,498,784
effective search space: 1913839488
effective search space used: 1913839488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.