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Search of human proteins with 75677559
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|75677559 hypothetical protein LOC619208 [Homo sapiens]
(80 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|75677559 hypothetical protein LOC619208 [Homo sapiens] 169 3e-43
gi|169160607 PREDICTED: hypothetical protein LOC100128071 [Homo ... 58 1e-09
gi|169161545 PREDICTED: hypothetical protein LOC100128071 [Homo ... 58 1e-09
gi|169161248 PREDICTED: hypothetical protein LOC100128071 [Homo ... 58 1e-09
gi|31652242 transcription factor 20 isoform 2 [Homo sapiens] 31 0.24
gi|31652244 transcription factor 20 isoform 1 [Homo sapiens] 31 0.24
gi|239744047 PREDICTED: hypothetical protein [Homo sapiens] 30 0.54
gi|223029436 hypothetical protein LOC643376 [Homo sapiens] 28 1.2
gi|239755294 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7
gi|239749787 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 27 2.7
gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens] 27 3.5
gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens] 27 3.5
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 27 3.5
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ... 27 3.5
gi|52694665 zinc finger and BTB domain containing 20 [Homo sapiens] 27 3.5
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 27 4.6
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 27 4.6
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 27 4.6
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 27 4.6
gi|239756274 PREDICTED: hypothetical protein [Homo sapiens] 27 4.6
gi|239750811 PREDICTED: hypothetical protein XP_002347568 [Homo ... 27 4.6
gi|239745171 PREDICTED: hypothetical protein XP_002343379 [Homo ... 27 4.6
gi|7110719 dickkopf homolog 1 precursor [Homo sapiens] 26 7.8
gi|19882241 immunoglobulin superfamily, DCC subclass, member 4 [... 26 7.8
gi|14249570 hypothetical protein LOC84934 [Homo sapiens] 26 7.8
>gi|75677559 hypothetical protein LOC619208 [Homo sapiens]
Length = 80
Score = 169 bits (429), Expect = 3e-43
Identities = 80/80 (100%), Positives = 80/80 (100%)
Query: 1 MPFQFGTQPRRFPVEGGDSSIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPV 60
MPFQFGTQPRRFPVEGGDSSIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPV
Sbjct: 1 MPFQFGTQPRRFPVEGGDSSIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPV 60
Query: 61 TVYATTRKPPAQSSKEMHPK 80
TVYATTRKPPAQSSKEMHPK
Sbjct: 61 TVYATTRKPPAQSSKEMHPK 80
>gi|169160607 PREDICTED: hypothetical protein LOC100128071 [Homo
sapiens]
Length = 127
Score = 58.2 bits (139), Expect = 1e-09
Identities = 30/64 (46%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MPFQFGTQPRRFPVEGGDS-SIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVP 59
M Q Q RRFP+E GDS + P S E +P R LRRCPG HCLT+ VP
Sbjct: 52 MSAQEPPQGRRFPIEAGDSRGLAAAPESQDSPEAVATEHNPVRPLRRCPGCHCLTLLHVP 111
Query: 60 VTVY 63
+ VY
Sbjct: 112 IDVY 115
>gi|169161545 PREDICTED: hypothetical protein LOC100128071 [Homo
sapiens]
Length = 127
Score = 58.2 bits (139), Expect = 1e-09
Identities = 30/64 (46%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MPFQFGTQPRRFPVEGGDS-SIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVP 59
M Q Q RRFP+E GDS + P S E +P R LRRCPG HCLT+ VP
Sbjct: 52 MSAQEPPQGRRFPIEAGDSRGLAAAPESQDSPEAVATEHNPVRPLRRCPGCHCLTLLHVP 111
Query: 60 VTVY 63
+ VY
Sbjct: 112 IDVY 115
>gi|169161248 PREDICTED: hypothetical protein LOC100128071 [Homo
sapiens]
Length = 127
Score = 58.2 bits (139), Expect = 1e-09
Identities = 30/64 (46%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 1 MPFQFGTQPRRFPVEGGDS-SIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVP 59
M Q Q RRFP+E GDS + P S E +P R LRRCPG HCLT+ VP
Sbjct: 52 MSAQEPPQGRRFPIEAGDSRGLAAAPESQDSPEAVATEHNPVRPLRRCPGCHCLTLLHVP 111
Query: 60 VTVY 63
+ VY
Sbjct: 112 IDVY 115
>gi|31652242 transcription factor 20 isoform 2 [Homo sapiens]
Length = 1938
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 9 PRRFPVEGGDSSIELEPGLSS--SAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATT 66
PR+F +E S+ E LS S C ++SP RQ+ R PG+H L +
Sbjct: 842 PRKFEIEPQSSAHEPGGSLSERRSVIC---DISPLRQIVRDPGAHSLGHMSADTRIGRND 898
Query: 67 RKPPAQSSKEMHP 79
R P S + P
Sbjct: 899 RLNPTLSQSVILP 911
>gi|31652244 transcription factor 20 isoform 1 [Homo sapiens]
Length = 1960
Score = 30.8 bits (68), Expect = 0.24
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 9 PRRFPVEGGDSSIELEPGLSS--SAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATT 66
PR+F +E S+ E LS S C ++SP RQ+ R PG+H L +
Sbjct: 842 PRKFEIEPQSSAHEPGGSLSERRSVIC---DISPLRQIVRDPGAHSLGHMSADTRIGRND 898
Query: 67 RKPPAQSSKEMHP 79
R P S + P
Sbjct: 899 RLNPTLSQSVILP 911
>gi|239744047 PREDICTED: hypothetical protein [Homo sapiens]
Length = 162
Score = 29.6 bits (65), Expect = 0.54
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Query: 9 PRRFPVEGGDSSIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATTRK 68
PRR P EPG S C G + S + Q R+C G ++T PV +T
Sbjct: 6 PRRLPRPHSQ-----EPG--SFLRCGGSDAS-SFQRRQCCGQKPQSLTGAPVRRLTSTEN 57
Query: 69 PPA 71
PPA
Sbjct: 58 PPA 60
>gi|223029436 hypothetical protein LOC643376 [Homo sapiens]
Length = 712
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 11 RFPVEGGDSSIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATTRKPP 70
+ P GGD EP + + N +EMSPTR C + D+ V+ + P
Sbjct: 385 QIPDPGGDFQ---EPSGTQPFSSNEQEMSPTRTELCQDSPMCTKLQDILVSASHSPDHPV 441
Query: 71 AQSSKEMHPK 80
+S E P+
Sbjct: 442 VKSEFESSPE 451
>gi|239755294 PREDICTED: hypothetical protein [Homo sapiens]
Length = 162
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Query: 9 PRRFPVEGGDSSIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATTRK 68
PRR P EPG S C + S + Q R+C G ++T PV +T
Sbjct: 6 PRRLPRPHSQ-----EPG--SFLRCGSSDAS-SFQRRQCCGQKPQSLTGAPVRRLTSTEN 57
Query: 69 PPA 71
PPA
Sbjct: 58 PPA 60
>gi|239749787 PREDICTED: hypothetical protein [Homo sapiens]
Length = 162
Score = 27.3 bits (59), Expect = 2.7
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Query: 9 PRRFPVEGGDSSIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATTRK 68
PRR P EPG S C + S + Q R+C G ++T PV +T
Sbjct: 6 PRRLPRPHSQ-----EPG--SFLRCGSSDAS-SFQRRQCCGQKPQSLTGAPVRRLTSTEN 57
Query: 69 PPA 71
PPA
Sbjct: 58 PPA 60
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 27.3 bits (59), Expect = 2.7
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 10/51 (19%)
Query: 1 MPFQF-GTQPRRFPVE------GGDSSIELEPGLSSSAACNGKEMSPTRQL 44
+P QF GT P+ + ++ G D+SI LEP L +S + +S TR+L
Sbjct: 240 IPLQFYGTLPKGYVIKEIHYRKGKDASISLEPDLDNSGS---NTVSKTRKL 287
>gi|194363771 sperm specific antigen 2 isoform 1 [Homo sapiens]
Length = 1259
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 14/55 (25%)
Query: 18 DSSIELEPGLSSSAA--------------CNGKEMSPTRQLRRCPGSHCLTITDV 58
+S + L+ GL +AA CN E + T+Q PG H + IT+V
Sbjct: 570 ESLVPLQKGLEKAAAVADKRKSGSQDFPQCNTIENTGTKQSTCSPGDHIIEITEV 624
>gi|28557788 sperm specific antigen 2 isoform 2 [Homo sapiens]
Length = 1256
Score = 26.9 bits (58), Expect = 3.5
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 14/55 (25%)
Query: 18 DSSIELEPGLSSSAA--------------CNGKEMSPTRQLRRCPGSHCLTITDV 58
+S + L+ GL +AA CN E + T+Q PG H + IT+V
Sbjct: 570 ESLVPLQKGLEKAAAVADKRKSGSQDFPQCNTIENTGTKQSTCSPGDHIIEITEV 624
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 6 GTQPRRFPVEGGDSSIELEPGLSSSAACNGKEMSPTR------QLRRCPGSHCL-TITDV 58
G + FP G + +L P S+++ G E +P+R + PGS ++++
Sbjct: 1381 GEESTTFPSSSGSTGTKLSPARSTTSGLVG-ESTPSRLSPSSTETTTLPGSPTTPSLSEK 1439
Query: 59 PVTVYATTRKPPAQSS 74
T Y + R P A S
Sbjct: 1440 STTFYTSPRSPDATLS 1455
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 6 GTQPRRFPVEGGDSSIELEPGLSSSAACNGKEMSPTR------QLRRCPGSHCL-TITDV 58
G + FP G + +L P S+++ G E +P+R + PGS ++++
Sbjct: 4021 GEESTTFPSSSGSTGTKLSPARSTTSGLVG-ESTPSRLSPSSTETTTLPGSPTTPSLSEK 4079
Query: 59 PVTVYATTRKPPAQSS 74
T Y + R P A S
Sbjct: 4080 STTFYTSPRSPDATLS 4095
>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
sapiens]
Length = 2036
Score = 26.9 bits (58), Expect = 3.5
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 6 GTQPRRFPVEGGDSSIELEPGLSSSAACNGKEMSPTR------QLRRCPGSHCL-TITDV 58
G + FP G + +L P S+++ G E +P+R + PGS ++++
Sbjct: 868 GEESTTFPSSSGSTGTKLSPARSTTSGLVG-ESTPSRLSPSSTETTTLPGSPTTPSLSEK 926
Query: 59 PVTVYATTRKPPAQSS 74
T Y + R P A S
Sbjct: 927 STTFYTSPRSPDATLS 942
>gi|52694665 zinc finger and BTB domain containing 20 [Homo sapiens]
Length = 668
Score = 26.9 bits (58), Expect = 3.5
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 7 TQPRRF---PVEGGDSSIELEPGLSSSAACNGKEMSPT 41
TQP + P EGG + +LE G SS N EM T
Sbjct: 334 TQPEQAAEAPAEGGPQTNQLETGASSPERSNEVEMDST 371
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 26.6 bits (57), Expect = 4.6
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 22 ELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATTRKPPAQSSKEMHP 79
E P + SA KE +PT + P + P TT K PA ++KE P
Sbjct: 285 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 342
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 26.6 bits (57), Expect = 4.6
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 22 ELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATTRKPPAQSSKEMHP 79
E P + SA KE +PT + P + P TT K PA ++KE P
Sbjct: 326 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 383
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 26.6 bits (57), Expect = 4.6
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 22 ELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATTRKPPAQSSKEMHP 79
E P + SA KE +PT + P + P TT K PA ++KE P
Sbjct: 378 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 435
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 26.6 bits (57), Expect = 4.6
Identities = 18/58 (31%), Positives = 24/58 (41%)
Query: 22 ELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATTRKPPAQSSKEMHP 79
E P + SA KE +PT + P + P TT K PA ++KE P
Sbjct: 419 EPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAP 476
>gi|239756274 PREDICTED: hypothetical protein [Homo sapiens]
Length = 775
Score = 26.6 bits (57), Expect = 4.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 15 EGGDSSIELEPGLSSSAACNGKE 37
EGGD S +L PG + +A G E
Sbjct: 582 EGGDRSAQLVPGAEAQSAAEGTE 604
>gi|239750811 PREDICTED: hypothetical protein XP_002347568 [Homo
sapiens]
Length = 765
Score = 26.6 bits (57), Expect = 4.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 15 EGGDSSIELEPGLSSSAACNGKE 37
EGGD S +L PG + +A G E
Sbjct: 572 EGGDRSAQLVPGAEAQSAAEGTE 594
>gi|239745171 PREDICTED: hypothetical protein XP_002343379 [Homo
sapiens]
Length = 765
Score = 26.6 bits (57), Expect = 4.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 15 EGGDSSIELEPGLSSSAACNGKE 37
EGGD S +L PG + +A G E
Sbjct: 572 EGGDRSAQLVPGAEAQSAAEGTE 594
>gi|7110719 dickkopf homolog 1 precursor [Homo sapiens]
Length = 266
Score = 25.8 bits (55), Expect = 7.8
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Query: 13 PVEGGDSSIELEPGLSSSAACNGKEMSPTRQLRRCPGSHC 52
P GGD+ +++ AC + R CPG++C
Sbjct: 100 PTRGGDAGVQI------CLACRKRRKRCMRHAMCCPGNYC 133
>gi|19882241 immunoglobulin superfamily, DCC subclass, member 4 [Homo
sapiens]
Length = 1250
Score = 25.8 bits (55), Expect = 7.8
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 28 SSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATTRKPPAQSS 74
++SA+C+ ++ P L PG C + P+ + P SS
Sbjct: 1203 AASASCSYPDLQPGEVLEETPGDSCQLKSPCPLGASPGLPRSPVSSS 1249
>gi|14249570 hypothetical protein LOC84934 [Homo sapiens]
Length = 269
Score = 25.8 bits (55), Expect = 7.8
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 8 QPRRFPVEG----GDSSIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVY 63
+PR P+ G S E P S G + +R L+R SH LT +VP T +
Sbjct: 155 RPREAPLRAIHPAGPSKTEPGPAADSQKLSMGG-LHSSRPLKRGL-SHSLTHLNVPSTGH 212
Query: 64 ATTRKPPAQSSKEMHP 79
T P +++ P
Sbjct: 213 PATSAPHTNGPQDLRP 228
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,712,897
Number of Sequences: 37866
Number of extensions: 152402
Number of successful extensions: 408
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 387
Number of HSP's gapped (non-prelim): 31
length of query: 80
length of database: 18,247,518
effective HSP length: 52
effective length of query: 28
effective length of database: 16,278,486
effective search space: 455797608
effective search space used: 455797608
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.