Guide to the Human Genome
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Name: ZBTB20 Sequence: fasta or formatted (668aa) NCBI GI: 52694665
Description:

zinc finger and BTB domain containing 20

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         37           2
 C cysteine            2.5         17           1
 D aspartate           3.9         26           2
 E glutamate           6.4         43           2
 F phenylalanine       3.1         21           2
 G glycine             7.2         48           2
 H histidine           4.0         27           2
 I isoleucine          4.2         28           1
 K lysine              3.6         24           3
 L leucine             6.7         45           3
 M methionine          2.1         14           1
 N asparagine          3.3         22           1
 P proline             6.3         42           2
 Q glutamine           7.6         51           2
 R arginine            4.8         32           1
 S serine             10.9         73           3
 T threonine           8.4         56           2
 V valine              6.1         41           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.8         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 20 
ZBTB45                0.129   zinc finger and BTB domain containing 45 
ZNF182                0.082   zinc finger protein 21 isoform 2 
ZNF182                0.082   zinc finger protein 21 isoform 1 
ZNF484                0.080   zinc finger protein 484 isoform b 
ZNF484                0.080   zinc finger protein 484 isoform a 
ZNF41                 0.080   zinc finger protein 41 
ZNF41                 0.080   zinc finger protein 41 
ZNF582                0.079   zinc finger protein 582 
LOC100287429          0.079   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.079   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.079   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.079   zinc finger protein 84 
ZNF84                 0.079   zinc finger protein 84 
ZNF552                0.079   zinc finger protein 552 
ZNF436                0.078   zinc finger protein 436 
ZNF436                0.078   zinc finger protein 436 
ZNF12                 0.078   zinc finger protein 12 isoform b 
ZNF12                 0.078   zinc finger protein 12 isoform a 
ZFP1                  0.078   zinc finger protein 1 homolog 
ZNF761                0.077   zinc finger protein 761 
ZNF146                0.077   zinc finger protein 146 
ZNF146                0.077   zinc finger protein 146 
ZNF146                0.077   zinc finger protein 146 
ZNF530                0.077   zinc finger protein 530 
ZNF585B               0.077   zinc finger protein 585B 
ZNF569                0.077   zinc finger protein 569 
ZNF585A               0.077   zinc finger protein 585A 
ZNF585A               0.077   zinc finger protein 585A 
ZNF846                0.076   zinc finger protein 846 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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