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Search of human proteins with 73760409
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|73760409 tissue factor pathway inhibitor isoform b precursor
[Homo sapiens]
(251 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|73760409 tissue factor pathway inhibitor isoform b precursor ... 537 e-153
gi|5454114 tissue factor pathway inhibitor isoform a precursor [... 447 e-126
gi|5730091 tissue factor pathway inhibitor 2 [Homo sapiens] 94 1e-19
gi|10863909 serine protease inhibitor, Kunitz type, 2 [Homo sapi... 87 2e-17
gi|28212222 WFIKKN2 protein [Homo sapiens] 79 5e-15
gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo sap... 78 8e-15
gi|16751923 WAP, follistatin/kazal, immunoglobulin, kunitz and n... 69 5e-12
gi|189571689 serine protease inhibitor, Kunitz type, 3 [Homo sap... 68 9e-12
gi|4502167 amyloid beta A4 protein isoform a precursor [Homo sap... 65 4e-11
gi|209915573 amyloid beta A4 protein isoform f precursor [Homo s... 65 4e-11
gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo s... 64 1e-10
gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo s... 64 1e-10
gi|240255535 alpha 3 type VI collagen isoform 4 precursor [Homo ... 64 1e-10
gi|214010181 amyloid beta (A4) precursor-like protein 2 isoform ... 62 6e-10
gi|4502147 amyloid beta (A4) precursor-like protein 2 isoform 1 ... 62 6e-10
gi|41406055 amyloid beta A4 protein isoform b precursor [Homo sa... 61 1e-09
gi|74027265 serine peptidase inhibitor, Kunitz type 1 isoform 2 ... 60 2e-09
gi|4504329 serine peptidase inhibitor, Kunitz type 1 isoform 2 p... 60 2e-09
gi|32313599 serine peptidase inhibitor, Kunitz type 1 isoform 1 ... 60 2e-09
gi|10732863 serine peptidase inhibitor-like, with Kunitz and WAP... 57 2e-08
gi|31563528 serine peptidase inhibitor-like, with Kunitz and WAP... 56 3e-08
gi|145309328 papilin [Homo sapiens] 55 6e-08
gi|154759255 collagen, type XXVIII precursor [Homo sapiens] 52 5e-07
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 50 2e-06
gi|110626171 serine peptidase inhibitor, Kunitz type 4 [Homo sap... 49 3e-06
gi|153946389 WAP four-disulfide core domain 8 precursor [Homo sa... 43 2e-04
gi|153946387 WAP four-disulfide core domain 8 precursor [Homo sa... 43 2e-04
gi|209870067 R3H domain and coiled-coil containing 1 [Homo sapiens] 31 1.2
gi|134152667 ICBP90 binding protein 1 [Homo sapiens] 28 9.9
>gi|73760409 tissue factor pathway inhibitor isoform b precursor
[Homo sapiens]
Length = 251
Score = 537 bits (1383), Expect = e-153
Identities = 251/251 (100%), Positives = 251/251 (100%)
Query: 1 MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADD 60
MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADD
Sbjct: 1 MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADD 60
Query: 61 GPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQE 120
GPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQE
Sbjct: 61 GPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQE 120
Query: 121 KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPN 180
KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPN
Sbjct: 121 KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPN 180
Query: 181 GFQVDNYGTQLNAVNNSLTPQSTKVPSLFVTKEGTNDGWKNAAHIYQVFLNAFCIHASMF 240
GFQVDNYGTQLNAVNNSLTPQSTKVPSLFVTKEGTNDGWKNAAHIYQVFLNAFCIHASMF
Sbjct: 181 GFQVDNYGTQLNAVNNSLTPQSTKVPSLFVTKEGTNDGWKNAAHIYQVFLNAFCIHASMF 240
Query: 241 FLGLDSISCLC 251
FLGLDSISCLC
Sbjct: 241 FLGLDSISCLC 251
>gi|5454114 tissue factor pathway inhibitor isoform a precursor
[Homo sapiens]
Length = 304
Score = 447 bits (1151), Expect = e-126
Identities = 209/209 (100%), Positives = 209/209 (100%)
Query: 1 MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADD 60
MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADD
Sbjct: 1 MIYTMKKVHALWASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADD 60
Query: 61 GPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQE 120
GPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQE
Sbjct: 61 GPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQE 120
Query: 121 KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPN 180
KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPN
Sbjct: 121 KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPN 180
Query: 181 GFQVDNYGTQLNAVNNSLTPQSTKVPSLF 209
GFQVDNYGTQLNAVNNSLTPQSTKVPSLF
Sbjct: 181 GFQVDNYGTQLNAVNNSLTPQSTKVPSLF 209
Score = 112 bits (281), Expect = 2e-25
Identities = 55/147 (37%), Positives = 77/147 (52%), Gaps = 21/147 (14%)
Query: 53 FCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC-------- 104
FC + D G C+ + R+F+N T+QCE F YGGC GN N FE+LEECK +C
Sbjct: 124 FCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGPNGFQ 183
Query: 105 -----TRDNA--------NRIIKTTLQQEKPDFCFLEEDPGICRGYITRYFYNNQTKQCE 151
T+ NA + + + + P +C D G+CR R++YN+ +C
Sbjct: 184 VDNYGTQLNAVNNSLTPQSTKVPSLFEFHGPSWCLTPADRGLCRANENRFYYNSVIGKCR 243
Query: 152 RFKYGGCLGNMNNFETLEECKNICEDG 178
FKY GC GN NNF + +EC C+ G
Sbjct: 244 PFKYSGCGGNENNFTSKQECLRACKKG 270
Score = 61.2 bits (147), Expect = 8e-10
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 42 TELPPLKLMH--SFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEE 99
T++P L H S+C AD G C+A RF++N +C F Y GC GN+N F S +E
Sbjct: 203 TKVPSLFEFHGPSWCLTPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKQE 262
Query: 100 CKKMCTRDNANRIIKTTLQQEK 121
C + C + RI K L + K
Sbjct: 263 CLRACKKGFIQRISKGGLIKTK 284
>gi|5730091 tissue factor pathway inhibitor 2 [Homo sapiens]
Length = 235
Score = 94.0 bits (232), Expect = 1e-19
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 51/173 (29%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFES----------LEECKKM 103
C D GPC+A++ R++++ +T+ C +F+YGGCEGN N F + +E+ K+
Sbjct: 36 CLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDACWRIEKVPKV 95
Query: 104 CTRD-------------------------------NANRI----------IKTTLQQEKP 122
C + NRI + ++ P
Sbjct: 96 CRLQVSVDDQCEGSTEKYFFNLSSMTCEKFFSGGCHRNRIENRFPDEATCMGFCAPKKIP 155
Query: 123 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
FC+ +D G+C +TRY++N + + C+ F Y GC GN NNF + E+CK C
Sbjct: 156 SFCYSPKDEGLCSANVTRYYFNPRYRTCDAFTYTGCGGNDNNFVSREDCKRAC 208
Score = 62.0 bits (149), Expect = 5e-10
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 123 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
+ C L D G CR + RY+Y+ T+ C +F YGGC GN NNF T E C + C
Sbjct: 34 EICLLPLDYGPCRALLLRYYYDRYTQSCRQFLYGGCEGNANNFYTWEACDDAC 86
Score = 60.5 bits (145), Expect = 1e-09
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 48 KLMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTR 106
K + SFC D+G C A + R++FN R C+ F Y GC GN N F S E+CK+ C +
Sbjct: 152 KKIPSFCYSPKDEGLCSANVTRYYFNPRYRTCDAFTYTGCGGNDNNFVSREDCKRACAK 210
>gi|10863909 serine protease inhibitor, Kunitz type, 2 [Homo
sapiens]
Length = 252
Score = 86.7 bits (213), Expect = 2e-17
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 24/150 (16%)
Query: 50 MHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC--TRD 107
+H FC G C+A M R+++N+ C+ F+YGGC+GN N + + EEC K C +
Sbjct: 34 IHDFCLVSKVVGRCRASMPRWWYNVTDGSCQLFVYGGCDGNSNNYLTKEECLKKCATVTE 93
Query: 108 NANRIIKTT------------LQQEKPD----------FCFLEEDPGICRGYITRYFYNN 145
NA + T+ +Q+ D +C G CR R++++
Sbjct: 94 NATGDLATSRNAADSSVPSAPRRQDSEDHSSDMFNYEEYCTANAVTGPCRASFPRWYFDV 153
Query: 146 QTKQCERFKYGGCLGNMNNFETLEECKNIC 175
+ C F YGGC GN N++ + E C C
Sbjct: 154 ERNSCNNFIYGGCRGNKNSYRSEEACMLRC 183
Score = 60.5 bits (145), Expect = 1e-09
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 53 FCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNAN 110
+C A GPC+A R++F++ C FIYGGC GN+N + S E C C R N
Sbjct: 132 YCTANAVTGPCRASFPRWYFDVERNSCNNFIYGGCRGNKNSYRSEEACMLRCFRQQEN 189
>gi|28212222 WFIKKN2 protein [Homo sapiens]
Length = 576
Score = 78.6 bits (192), Expect = 5e-15
Identities = 42/122 (34%), Positives = 52/122 (42%), Gaps = 13/122 (10%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRII 113
C D C R+ F+ C F +G C N N FE+ E C C
Sbjct: 328 CLKPPDSEDCGEEQTRWHFDAQANNCLTFTFGHCHRNLNHFETYEACMLACMSGPLAA-- 385
Query: 114 KTTLQQEKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKN 173
C L G C+ Y R+ YN+QT QC+ F YGGC GN NNFE+ E C+
Sbjct: 386 -----------CSLPALQGPCKAYAPRWAYNSQTGQCQSFVYGGCEGNGNNFESREACEE 434
Query: 174 IC 175
C
Sbjct: 435 SC 436
Score = 67.8 bits (164), Expect = 9e-12
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRII 113
C+ A GPCKA R+ +N T QC+ F+YGGCEGN N FES E C++ C N+
Sbjct: 386 CSLPALQGPCKAYAPRWAYNSQTGQCQSFVYGGCEGNGNNFESREACEESCPFPRGNQRC 445
Query: 114 KTTLQQEKPDFCFLEED 130
+ ++K F D
Sbjct: 446 RACKPRQKLVTSFCRSD 462
Score = 43.9 bits (102), Expect = 1e-04
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 125 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGP 179
C D C TR+ ++ Q C F +G C N+N+FET E C C GP
Sbjct: 328 CLKPPDSEDCGEEQTRWHFDAQANNCLTFTFGHCHRNLNHFETYEACMLACMSGP 382
>gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo
sapiens]
Length = 352
Score = 77.8 bits (190), Expect = 8e-15
Identities = 41/122 (33%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMCTRDNANRII 113
C GPC + R+F+N + CE F YGGC GN N F + +EC + C A
Sbjct: 231 CQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTCRTVAA---- 286
Query: 114 KTTLQQEKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKN 173
C L G CR +I + ++ +C F YGGC GN N F + +EC+
Sbjct: 287 -----------CNLPIVRGPCRAFIQLWAFDAVKGKCVLFPYGGCQGNGNKFYSEKECRE 335
Query: 174 IC 175
C
Sbjct: 336 YC 337
Score = 65.1 bits (157), Expect = 6e-11
Identities = 28/56 (50%), Positives = 34/56 (60%)
Query: 120 EKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
+K D C L G C G +RYFYN + CE F+YGGC+GN NNF T +EC C
Sbjct: 226 KKEDSCQLGYSAGPCMGMTSRYFYNGTSMACETFQYGGCMGNGNNFVTEKECLQTC 281
>gi|16751923 WAP, follistatin/kazal, immunoglobulin, kunitz and
netrin domain containing 1 precursor [Homo sapiens]
Length = 548
Score = 68.6 bits (166), Expect = 5e-12
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 79 CEEFIYGGCEGNQNRFESLEECKKMCTRDNANRIIKTTLQQEKPDFCFLEEDPGICRGYI 138
C F GC+G FE+ E C++ C R D C L G CRG+
Sbjct: 326 CMTFPARGCDGAARGFETYEACQQACARGPG-------------DACVLPAVQGPCRGWE 372
Query: 139 TRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
R+ Y+ +QC F YGGC GN NNF + E C++ C
Sbjct: 373 PRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC 409
Score = 55.8 bits (133), Expect = 3e-08
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
C A GPC+ R+ ++ +QC F+YGGCEGN N F S E C+ C
Sbjct: 359 CVLPAVQGPCRGWEPRWAYSPLLQQCHPFVYGGCEGNGNNFHSRESCEDAC 409
Score = 34.3 bits (77), Expect = 0.11
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 137 YITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGP 179
++ + Y+ Q C F GC G FET E C+ C GP
Sbjct: 313 HLVLWHYDPQRGGCMTFPARGCDGAARGFETYEACQQACARGP 355
>gi|189571689 serine protease inhibitor, Kunitz type, 3 [Homo
sapiens]
Length = 89
Score = 67.8 bits (164), Expect = 9e-12
Identities = 28/56 (50%), Positives = 36/56 (64%)
Query: 49 LMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
L+ + CAF + GPC+ M R+FFN T +CE F YGGC GN N F E+C+K C
Sbjct: 31 LLPNVCAFPMEKGPCQTYMTRWFFNFETGECELFAYGGCGGNSNNFLRKEKCEKFC 86
Score = 65.5 bits (158), Expect = 4e-11
Identities = 26/67 (38%), Positives = 42/67 (62%)
Query: 110 NRIIKTTLQQEKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLE 169
+ + + T++ P+ C + G C+ Y+TR+F+N +T +CE F YGGC GN NNF E
Sbjct: 21 SELARDTIKDLLPNVCAFPMEKGPCQTYMTRWFFNFETGECELFAYGGCGGNSNNFLRKE 80
Query: 170 ECKNICE 176
+C+ C+
Sbjct: 81 KCEKFCK 87
>gi|4502167 amyloid beta A4 protein isoform a precursor [Homo
sapiens]
Length = 770
Score = 65.5 bits (158), Expect = 4e-11
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 37 TIITDTELPPLKLMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFES 96
T T T +++ C+ +A+ GPC+A++ R++F++ +C F YGGC GN+N F++
Sbjct: 274 TTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDT 333
Query: 97 LEECKKMCTRDNANRIIKTT 116
E C +C + ++KTT
Sbjct: 334 EEYCMAVCGSAMSQSLLKTT 353
Score = 52.8 bits (125), Expect = 3e-07
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 86 GCEGNQNRFESLEECKKMCTRDNANRIIKT-TLQQEKPDFCFLEEDPGICRGYITRYFYN 144
G E + E EE + T T ++++ + C + + G CR I+R++++
Sbjct: 251 GDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFD 310
Query: 145 NQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
+C F YGGC GN NNF+T E C +C
Sbjct: 311 VTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 341
>gi|209915573 amyloid beta A4 protein isoform f precursor [Homo
sapiens]
Length = 714
Score = 65.5 bits (158), Expect = 4e-11
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 37 TIITDTELPPLKLMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFES 96
T T T +++ C+ +A+ GPC+A++ R++F++ +C F YGGC GN+N F++
Sbjct: 218 TTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDT 277
Query: 97 LEECKKMCTRDNANRIIKTT 116
E C +C + ++KTT
Sbjct: 278 EEYCMAVCGSAMSQSLLKTT 297
Score = 52.8 bits (125), Expect = 3e-07
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 86 GCEGNQNRFESLEECKKMCTRDNANRIIKT-TLQQEKPDFCFLEEDPGICRGYITRYFYN 144
G E + E EE + T T ++++ + C + + G CR I+R++++
Sbjct: 195 GDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFD 254
Query: 145 NQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
+C F YGGC GN NNF+T E C +C
Sbjct: 255 VTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 285
>gi|55743106 alpha 3 type VI collagen isoform 5 precursor [Homo
sapiens]
Length = 2971
Score = 64.3 bits (155), Expect = 1e-10
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 123 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
D C L +D G CR +I +++Y+ TK C RF YGGC GN N F + +EC+ +C
Sbjct: 2904 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 2956
Score = 60.8 bits (146), Expect = 1e-09
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 23 PAPLNADSEEDEEHTIITDTELPPLKLMHS-FCAFKADDGPCKAIMKRFFFNIFTRQCEE 81
P P A S ++ TE PL L + C D+G C+ + +++++ T+ C
Sbjct: 2876 PPPQPARSASSSTINLMVSTE--PLALTETDICKLPKDEGTCRDFILKWYYDPNTKSCAR 2933
Query: 82 FIYGGCEGNQNRFESLEECKKMC 104
F YGGC GN+N+F S +EC+K+C
Sbjct: 2934 FWYGGCGGNENKFGSQKECEKVC 2956
>gi|55743098 alpha 3 type VI collagen isoform 1 precursor [Homo
sapiens]
Length = 3177
Score = 64.3 bits (155), Expect = 1e-10
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 123 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
D C L +D G CR +I +++Y+ TK C RF YGGC GN N F + +EC+ +C
Sbjct: 3110 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 3162
Score = 60.8 bits (146), Expect = 1e-09
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 23 PAPLNADSEEDEEHTIITDTELPPLKLMHS-FCAFKADDGPCKAIMKRFFFNIFTRQCEE 81
P P A S ++ TE PL L + C D+G C+ + +++++ T+ C
Sbjct: 3082 PPPQPARSASSSTINLMVSTE--PLALTETDICKLPKDEGTCRDFILKWYYDPNTKSCAR 3139
Query: 82 FIYGGCEGNQNRFESLEECKKMC 104
F YGGC GN+N+F S +EC+K+C
Sbjct: 3140 FWYGGCGGNENKFGSQKECEKVC 3162
>gi|240255535 alpha 3 type VI collagen isoform 4 precursor [Homo
sapiens]
Length = 2570
Score = 64.3 bits (155), Expect = 1e-10
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 123 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
D C L +D G CR +I +++Y+ TK C RF YGGC GN N F + +EC+ +C
Sbjct: 2503 DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVC 2555
Score = 60.8 bits (146), Expect = 1e-09
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 23 PAPLNADSEEDEEHTIITDTELPPLKLMHS-FCAFKADDGPCKAIMKRFFFNIFTRQCEE 81
P P A S ++ TE PL L + C D+G C+ + +++++ T+ C
Sbjct: 2475 PPPQPARSASSSTINLMVSTE--PLALTETDICKLPKDEGTCRDFILKWYYDPNTKSCAR 2532
Query: 82 FIYGGCEGNQNRFESLEECKKMC 104
F YGGC GN+N+F S +EC+K+C
Sbjct: 2533 FWYGGCGGNENKFGSQKECEKVC 2555
>gi|214010181 amyloid beta (A4) precursor-like protein 2 isoform 2
[Homo sapiens]
Length = 751
Score = 61.6 bits (148), Expect = 6e-10
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
C+ +A GPC+A+M R++F++ +C FIYGGC GN+N FES + C +C
Sbjct: 310 CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVC 360
Score = 50.8 bits (120), Expect = 1e-06
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 125 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICE 176
C E G CR + R++++ +C RF YGGC GN NNFE+ + C +C+
Sbjct: 310 CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCK 361
>gi|4502147 amyloid beta (A4) precursor-like protein 2 isoform 1
[Homo sapiens]
Length = 763
Score = 61.6 bits (148), Expect = 6e-10
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
C+ +A GPC+A+M R++F++ +C FIYGGC GN+N FES + C +C
Sbjct: 310 CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVC 360
Score = 50.8 bits (120), Expect = 1e-06
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 125 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICE 176
C E G CR + R++++ +C RF YGGC GN NNFE+ + C +C+
Sbjct: 310 CSQEAMTGPCRAVMPRWYFDLSKGKCVRFIYGGCGGNRNNFESEDYCMAVCK 361
>gi|41406055 amyloid beta A4 protein isoform b precursor [Homo
sapiens]
Length = 751
Score = 60.8 bits (146), Expect = 1e-09
Identities = 24/68 (35%), Positives = 42/68 (61%)
Query: 37 TIITDTELPPLKLMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFES 96
T T T +++ C+ +A+ GPC+A++ R++F++ +C F YGGC GN+N F++
Sbjct: 274 TTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDT 333
Query: 97 LEECKKMC 104
E C +C
Sbjct: 334 EEYCMAVC 341
Score = 52.8 bits (125), Expect = 3e-07
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 86 GCEGNQNRFESLEECKKMCTRDNANRIIKT-TLQQEKPDFCFLEEDPGICRGYITRYFYN 144
G E + E EE + T T ++++ + C + + G CR I+R++++
Sbjct: 251 GDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFD 310
Query: 145 NQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
+C F YGGC GN NNF+T E C +C
Sbjct: 311 VTEGKCAPFFYGGCGGNRNNFDTEEYCMAVC 341
>gi|74027265 serine peptidase inhibitor, Kunitz type 1 isoform 2
precursor [Homo sapiens]
Length = 513
Score = 59.7 bits (143), Expect = 2e-09
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 107 DNANRIIKTTLQQEKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFE 166
D AN + ++ D+C G CRG R++Y+ + C+ F YGGCLGN NN+
Sbjct: 232 DTANVTVTVLSTKQTEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYL 291
Query: 167 TLEECKNICE--DGPN 180
EEC C GP+
Sbjct: 292 REEECILACRGVQGPS 307
Score = 57.8 bits (138), Expect = 9e-09
Identities = 47/206 (22%), Positives = 70/206 (33%), Gaps = 58/206 (28%)
Query: 26 LNADSEEDEEHTIITDTELPPLKLMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYG 85
L S + E T + K +C G C+ R++++ + C+ F+YG
Sbjct: 222 LTVTSSDHPEDTANVTVTVLSTKQTEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYG 281
Query: 86 G-----------------CEGNQNRFESLEE---------------CKKMCTRDNANRII 113
G C G Q S+E C C D+
Sbjct: 282 GCLGNKNNYLREEECILACRGVQG--PSMERRHPVCSGTCQPTQFRCSNGCCIDSFLECD 339
Query: 114 KTTLQQEKPDFCFLEE------------------------DPGICRGYITRYFYNNQTKQ 149
T + D E+ D G+C+ I R++YN ++
Sbjct: 340 DTPNCPDASDEAACEKYTSGFDELQRIHFPSDKGHCVDLPDTGLCKESIPRWYYNPFSEH 399
Query: 150 CERFKYGGCLGNMNNFETLEECKNIC 175
C RF YGGC GN NNFE ++C C
Sbjct: 400 CARFTYGGCYGNKNNFEEEQQCLESC 425
>gi|4504329 serine peptidase inhibitor, Kunitz type 1 isoform 2
precursor [Homo sapiens]
Length = 513
Score = 59.7 bits (143), Expect = 2e-09
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 107 DNANRIIKTTLQQEKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFE 166
D AN + ++ D+C G CRG R++Y+ + C+ F YGGCLGN NN+
Sbjct: 232 DTANVTVTVLSTKQTEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYL 291
Query: 167 TLEECKNICE--DGPN 180
EEC C GP+
Sbjct: 292 REEECILACRGVQGPS 307
Score = 57.8 bits (138), Expect = 9e-09
Identities = 47/206 (22%), Positives = 70/206 (33%), Gaps = 58/206 (28%)
Query: 26 LNADSEEDEEHTIITDTELPPLKLMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYG 85
L S + E T + K +C G C+ R++++ + C+ F+YG
Sbjct: 222 LTVTSSDHPEDTANVTVTVLSTKQTEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYG 281
Query: 86 G-----------------CEGNQNRFESLEE---------------CKKMCTRDNANRII 113
G C G Q S+E C C D+
Sbjct: 282 GCLGNKNNYLREEECILACRGVQG--PSMERRHPVCSGTCQPTQFRCSNGCCIDSFLECD 339
Query: 114 KTTLQQEKPDFCFLEE------------------------DPGICRGYITRYFYNNQTKQ 149
T + D E+ D G+C+ I R++YN ++
Sbjct: 340 DTPNCPDASDEAACEKYTSGFDELQRIHFPSDKGHCVDLPDTGLCKESIPRWYYNPFSEH 399
Query: 150 CERFKYGGCLGNMNNFETLEECKNIC 175
C RF YGGC GN NNFE ++C C
Sbjct: 400 CARFTYGGCYGNKNNFEEEQQCLESC 425
>gi|32313599 serine peptidase inhibitor, Kunitz type 1 isoform 1
precursor [Homo sapiens]
Length = 529
Score = 59.7 bits (143), Expect = 2e-09
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 107 DNANRIIKTTLQQEKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFE 166
D AN + ++ D+C G CRG R++Y+ + C+ F YGGCLGN NN+
Sbjct: 232 DTANVTVTVLSTKQTEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYGGCLGNKNNYL 291
Query: 167 TLEECKNICEDGPNG 181
EEC C G
Sbjct: 292 REEECILACRGVQGG 306
Score = 57.0 bits (136), Expect = 2e-08
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 130 DPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
D G+C+ I R++YN ++ C RF YGGC GN NNFE ++C C
Sbjct: 396 DTGLCKESIPRWYYNPFSEHCARFTYGGCYGNKNNFEEEQQCLESC 441
Score = 54.7 bits (130), Expect = 8e-08
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
C D G CK + R+++N F+ C F YGGC GN+N FE ++C + C
Sbjct: 391 CVDLPDTGLCKESIPRWYYNPFSEHCARFTYGGCYGNKNNFEEEQQCLESC 441
Score = 46.6 bits (109), Expect = 2e-05
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 26 LNADSEEDEEHTIITDTELPPLKLMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYG 85
L S + E T + K +C G C+ R++++ + C+ F+YG
Sbjct: 222 LTVTSSDHPEDTANVTVTVLSTKQTEDYCLASNKVGRCRGSFPRWYYDPTEQICKSFVYG 281
Query: 86 GCEGNQNRFESLEECKKMC 104
GC GN+N + EEC C
Sbjct: 282 GCLGNKNNYLREEECILAC 300
>gi|10732863 serine peptidase inhibitor-like, with Kunitz and WAP
domains 1 isoform 1 precursor [Homo sapiens]
Length = 133
Score = 56.6 bits (135), Expect = 2e-08
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 74 IFTRQCEEFIYGGCEGNQN----RFESLEECKKMCTRDNANRIIKTTLQQEKPDFCFLEE 129
+F R+C + I CE + + ++ KK C + + K D C + +
Sbjct: 28 LFPRRCPK-IREECEFQERDVCTKDRQCQDNKKCCVFSCGKKCLDL-----KQDVCEMPK 81
Query: 130 DPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICED 177
+ G C Y ++Y+ + C F YGGC GN NNF++ C N C++
Sbjct: 82 ETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKANCLNTCKN 129
Score = 50.4 bits (119), Expect = 1e-06
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 47 LKLMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
L L C + GPC A ++++ C F+YGGC+GN N F+S C C
Sbjct: 70 LDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKANCLNTC 127
>gi|31563528 serine peptidase inhibitor-like, with Kunitz and WAP
domains 1 isoform 2 [Homo sapiens]
Length = 117
Score = 55.8 bits (133), Expect = 3e-08
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 121 KPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICED 177
K D C + ++ G C Y ++Y+ + C F YGGC GN NNF++ C N C++
Sbjct: 57 KQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKANCLNTCKN 113
Score = 50.4 bits (119), Expect = 1e-06
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 47 LKLMHSFCAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
L L C + GPC A ++++ C F+YGGC+GN N F+S C C
Sbjct: 54 LDLKQDVCEMPKETGPCLAYFLHWWYDKKDNTCSMFVYGGCQGNNNNFQSKANCLNTC 111
>gi|145309328 papilin [Homo sapiens]
Length = 1251
Score = 55.1 bits (131), Expect = 6e-08
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 122 PDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICE---DG 178
P C L G C + R+++ QC RF YGGC GN NNF + +EC + C+ G
Sbjct: 724 PVRCLLPSAHGSCADWAARWYFVASVGQCNRFWYGGCHGNANNFASEQECMSSCQGSLHG 783
Query: 179 PNGFQVDNYGTQLNAVNNSLTPQSTKVPS 207
P Q G + +P + PS
Sbjct: 784 PRRPQPGASGRSTHTDGGGSSPAGEQEPS 812
Score = 46.6 bits (109), Expect = 2e-05
Identities = 20/51 (39%), Positives = 24/51 (47%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
C + G C R++F QC F YGGC GN N F S +EC C
Sbjct: 727 CLLPSAHGSCADWAARWYFVASVGQCNRFWYGGCHGNANNFASEQECMSSC 777
>gi|154759255 collagen, type XXVIII precursor [Homo sapiens]
Length = 1125
Score = 52.0 bits (123), Expect = 5e-07
Identities = 21/67 (31%), Positives = 34/67 (50%)
Query: 112 IIKTTLQQEKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEEC 171
++ T + + C PG C Y+ R++Y+ Q C RF + GC G+ N F + +EC
Sbjct: 1059 LLSTPVDGAEDPRCLEALKPGNCGEYVVRWYYDKQVNSCARFWFSGCNGSGNRFNSEKEC 1118
Query: 172 KNICEDG 178
+ C G
Sbjct: 1119 QETCIQG 1125
Score = 40.4 bits (93), Expect = 0.001
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
C G C + R++++ C F + GC G+ NRF S +EC++ C
Sbjct: 1072 CLEALKPGNCGEYVVRWYYDKQVNSCARFWFSGCNGSGNRFNSEKECQETC 1122
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 49.7 bits (117), Expect = 2e-06
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFT---RQCEEFIYGGCEGNQNRFESLEECKKMC 104
C+ D+G C A R++ T C F+YGGC GN NRF + E C++ C
Sbjct: 2876 CSLPLDEGSCTAYTLRWYHRAVTGSTEACHPFVYGGCGGNANRFGTREACERRC 2929
Score = 48.9 bits (115), Expect = 4e-06
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 120 EKPDFCFLEEDPGICRGYITRYFYN---NQTKQCERFKYGGCLGNMNNFETLEECKNICE 176
+ D C L D G C Y R+++ T+ C F YGGC GN N F T E C+ C
Sbjct: 2871 DSDDPCSLPLDEGSCTAYTLRWYHRAVTGSTEACHPFVYGGCGGNANRFGTREACERRCP 2930
Query: 177 DGPNGFQVDNYGT 189
P Q GT
Sbjct: 2931 --PRVVQSQGTGT 2941
>gi|110626171 serine peptidase inhibitor, Kunitz type 4 [Homo
sapiens]
Length = 99
Score = 49.3 bits (116), Expect = 3e-06
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 123 DFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
D C L+ + G C RYFYN +K+CE F + GC GN+NNF+ E + C
Sbjct: 39 DPCKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
Score = 43.1 bits (100), Expect = 2e-04
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC 104
C + G C + R+F+N +++CE F++ GC GN N F+ E + C
Sbjct: 41 CKLDMNFGSCYEVHFRYFYNRTSKRCETFVFSGCNGNLNNFKLKIEREVAC 91
>gi|153946389 WAP four-disulfide core domain 8 precursor [Homo
sapiens]
Length = 241
Score = 43.1 bits (100), Expect = 2e-04
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC---TRDNAN 110
C G C +R+ F+ +C F Y GCEGN N F + + C+ C +D
Sbjct: 95 CMLPVRHGNCNHEAQRWHFDFKNYRCTPFKYRGCEGNANNFLNEDACRTACMLIVKDGQC 154
Query: 111 RIIKTTLQQEKPDFCFLEED 130
+ T ++E P C + D
Sbjct: 155 PLFPFTERKECPPSCHSDID 174
Score = 41.6 bits (96), Expect = 7e-04
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 125 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
C L G C R+ ++ + +C FKY GC GN NNF + C+ C
Sbjct: 95 CMLPVRHGNCNHEAQRWHFDFKNYRCTPFKYRGCEGNANNFLNEDACRTAC 145
>gi|153946387 WAP four-disulfide core domain 8 precursor [Homo
sapiens]
Length = 241
Score = 43.1 bits (100), Expect = 2e-04
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 54 CAFKADDGPCKAIMKRFFFNIFTRQCEEFIYGGCEGNQNRFESLEECKKMC---TRDNAN 110
C G C +R+ F+ +C F Y GCEGN N F + + C+ C +D
Sbjct: 95 CMLPVRHGNCNHEAQRWHFDFKNYRCTPFKYRGCEGNANNFLNEDACRTACMLIVKDGQC 154
Query: 111 RIIKTTLQQEKPDFCFLEED 130
+ T ++E P C + D
Sbjct: 155 PLFPFTERKECPPSCHSDID 174
Score = 41.6 bits (96), Expect = 7e-04
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 125 CFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNIC 175
C L G C R+ ++ + +C FKY GC GN NNF + C+ C
Sbjct: 95 CMLPVRHGNCNHEAQRWHFDFKNYRCTPFKYRGCEGNANNFLNEDACRTAC 145
>gi|209870067 R3H domain and coiled-coil containing 1 [Homo sapiens]
Length = 253
Score = 30.8 bits (68), Expect = 1.2
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 166 ETLEECKNICEDGPNGFQVDNYGTQLNAVNNSLTPQSTKVPSLFVTKEGTND---GWKNA 222
E E+ + + EDGP+ D+Y L + ++LT + ++ + + + G K+
Sbjct: 70 EEEEDEEEVEEDGPSSCSEDDYSELLQEITDNLTKKEIQIEKIHLDTSSFVEELPGEKDL 129
Query: 223 AHIYQVF 229
AH+ +++
Sbjct: 130 AHVVEIY 136
>gi|134152667 ICBP90 binding protein 1 [Homo sapiens]
Length = 1440
Score = 27.7 bits (60), Expect = 9.9
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 13 ASVCLLLNLAPAPLNADSEEDEEHTIITDTELPPLKLMHSFCAFKADDGP 62
A V LL++ AP ++ADS + T + D+EL P + +D GP
Sbjct: 878 AEVALLMHPAPGAVDADS-AGSDSTSLVDSELSPSEDRELKSDASSDQGP 926
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,797,749
Number of Sequences: 37866
Number of extensions: 507027
Number of successful extensions: 1058
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 979
Number of HSP's gapped (non-prelim): 67
length of query: 251
length of database: 18,247,518
effective HSP length: 100
effective length of query: 151
effective length of database: 14,460,918
effective search space: 2183598618
effective search space used: 2183598618
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.