EMD 29926

Name: EMD	Sequence: fasta or formatted (254aa)		NCBI GI: 4557553
Description: emerin		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death Nucleus and Nucleolus Additional Interaction Domain Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 15 2 C cysteine 0.4 1 1 D aspartate 7.5 19 3 E glutamate 6.3 16 3 F phenylalanine 4.7 12 2 G glycine 4.7 12 1 H histidine 2.4 6 2 I isoleucine 2.4 6 1 K lysine 2.4 6 2 L leucine 8.7 22 3 M methionine 2.0 5 1 N asparagine 2.4 6 1 P proline 5.9 15 2 Q glutamine 3.5 9 1 R arginine 8.3 21 3 S serine 15.4 39 8 T threonine 5.5 14 2 V valine 3.9 10 2 W tryptophan 0.8 2 1 Y tyrosine 7.1 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 emerin TMPO 0.076 thymopoietin isoform gamma TMPO 0.037 thymopoietin isoform beta TMPO 0.037 thymopoietin isoform alpha LEMD3 0.024 LEM domain containing 3 CHD9 0.022 chromodomain helicase DNA binding protein 9 LEMD1 0.020 LEM domain containing 1 DCC 0.018 deleted in colorectal carcinoma PPP1R12A 0.014 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.014 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.014 protein phosphatase 1, regulatory (inhibitor) subunit... EPB49 0.014 erythrocyte membrane protein band 4.9 isoform 3 [Ho... EPB49 0.014 erythrocyte membrane protein band 4.9 isoform 2 [Ho... EPB49 0.014 erythrocyte membrane protein band 4.9 isoform 2 [Ho... TNRC18 0.014 trinucleotide repeat containing 18 DSPP 0.012 dentin sialophosphoprotein preproprotein ARHGAP5 0.012 Rho GTPase activating protein 5 isoform a ARHGAP5 0.012 Rho GTPase activating protein 5 isoform b SORBS2 0.012 sorbin and SH3 domain containing 2 isoform 8 SORBS2 0.012 sorbin and SH3 domain containing 2 isoform 2 DACH1 0.010 dachshund homolog 1 isoform b DACH1 0.010 dachshund homolog 1 isoform a DACH1 0.010 dachshund homolog 1 isoform c SEC16A 0.010 SEC16 homolog A CTTNBP2NL 0.010 CTTNBP2 N-terminal like RLIM 0.010 ring finger protein, LIM domain interacting RLIM 0.010 ring finger protein, LIM domain interacting RANBP10 0.010 RAN binding protein 10 SRRM2 0.010 splicing coactivator subunit SRm300 UBAP2 0.010 ubiquitin associated protein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.