Guide to the Human Genome
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Name: SOST Sequence: fasta or formatted (213aa) NCBI GI: 13376846
Description:

sclerostin precursor

Referenced in:

Bone and Related Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         19           2
 C cysteine            4.7         10           1
 D aspartate           2.8          6           1
 E glutamate           8.0         17           1
 F phenylalanine       3.3          7           1
 G glycine             7.0         15           2
 H histidine           2.3          5           2
 I isoleucine          1.9          4           2
 K lysine              5.6         12           1
 L leucine             8.5         18           2
 M methionine          0.9          2           1
 N asparagine          4.2          9           2
 P proline             9.9         21           3
 Q glutamine           4.2          9           1
 R arginine           10.8         23           1
 S serine              3.8          8           1
 T threonine           4.2          9           1
 V valine              5.2         11           2
 W tryptophan          1.4          3           2
 Y tyrosine            2.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sclerostin precursor 
SOSTDC1               0.247   sclerostin domain containing 1 precursor 
GREM2                 0.023   gremlin 2 precursor 
LOC100133063          0.012   PREDICTED: similar to breast cancer anti-estrogen r...
LOC100293983          0.012   PREDICTED: similar to mucin, partial 
OTOG                  0.009   PREDICTED: otogelin isoform 1 
OTOG                  0.009   PREDICTED: otogelin isoform 2 
OTOG                  0.009   PREDICTED: otogelin isoform 2 
OTOG                  0.009   PREDICTED: otogelin isoform 1 
OTOG                  0.009   PREDICTED: otogelin isoform 2 
OTOG                  0.009   PREDICTED: otogelin isoform 1 
GREM1                 0.007   gremlin-1 precursor 
CBX5                  0.007   heterochromatin protein 1-alpha 
CBX5                  0.007   heterochromatin protein 1-alpha 
CBX5                  0.007   heterochromatin protein 1-alpha 
LOC100130174          0.007   PREDICTED: hypothetical protein 
LOC100130174          0.007   PREDICTED: hypothetical protein 
LOC100130174          0.007   PREDICTED: hypothetical protein 
TOPORS                0.007   topoisomerase I binding, arginine/serine-rich 
ALOX15B               0.007   arachidonate 15-lipoxygenase, second type isoform b ...
ALOX15B               0.007   arachidonate 15-lipoxygenase, second type isoform a ...
ALOX15B               0.007   arachidonate 15-lipoxygenase, second type isoform d ...
YTHDC2                0.007   YTH domain containing 2 
LOC100128328          0.005   PREDICTED: hypothetical protein 
LOC100128328          0.005   PREDICTED: hypothetical protein 
MAN2A2                0.005   mannosidase, alpha, class 2A, member 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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