Search of human proteins with 7019507

Search of human proteins with 7019507

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7019507 purine-rich element binding protein G isoform A
[Homo sapiens]
         (347 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7019507 purine-rich element binding protein G isoform A [Homo...   711   0.0  
gi|62865862 purine-rich element binding protein G isoform B [Hom...   588   e-168
gi|5032007 purine-rich element binding protein A [Homo sapiens]       301   6e-82
gi|15147219 purine-rich element binding protein B [Homo sapiens]      286   1e-77
gi|23510368 homeobox D11 [Homo sapiens]                                35   0.13 
gi|38198663 potassium channel tetramerisation domain containing ...    33   0.38 
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s...    33   0.38 
gi|4758392 forkhead box D1 [Homo sapiens]                              33   0.49 
gi|5453936 POU class 3 homeobox 3 [Homo sapiens]                       33   0.49 
gi|52426745 Cas-Br-M (murine) ecotropic retroviral transforming ...    32   0.64 
gi|46430491 scratch 2 protein [Homo sapiens]                           32   0.64 
gi|4758168 distal-less homeobox 2 [Homo sapiens]                       32   0.84 
gi|154448890 THO complex 1 [Homo sapiens]                              32   0.84 
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            32   1.1  
gi|51479145 brefeldin A-inhibited guanine nucleotide-exchange pr...    32   1.1  
gi|45439359 triple functional domain (PTPRF interacting) [Homo s...    32   1.1  
gi|122937424 one cut homeobox 3 [Homo sapiens]                         32   1.1  
gi|44917619 kelch domain containing 10 [Homo sapiens]                  31   1.4  
gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]     31   1.9  
gi|4826830 methyl CpG binding protein 2 isoform 1 [Homo sapiens]       31   1.9  
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i...    31   1.9  
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s...    31   1.9  
gi|4503765 fragile X mental retardation 1 [Homo sapiens]               30   2.4  
gi|116006951 polycystin 1-like 2 isoform a [Homo sapiens]              30   2.4  
gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens]     30   2.4  
gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens]     30   2.4  
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    30   2.4  
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    30   2.4  
gi|33620755 YEATS domain containing 2 [Homo sapiens]                   30   2.4  
gi|169214870 PREDICTED: similar to hCG2041260 [Homo sapiens]           30   3.2  

>gi|7019507 purine-rich element binding protein G isoform A [Homo
           sapiens]
          Length = 347

 Score =  711 bits (1834), Expect = 0.0
 Identities = 347/347 (100%), Positives = 347/347 (100%)

Query: 1   MERARRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQEL 60
           MERARRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQEL
Sbjct: 1   MERARRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQEL 60

Query: 61  ASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLG 120
           ASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLG
Sbjct: 61  ASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLG 120

Query: 121 DFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDN 180
           DFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDN
Sbjct: 121 DFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDN 180

Query: 181 RKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLI 240
           RKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLI
Sbjct: 181 RKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLI 240

Query: 241 EDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSEVRPPYRNTI 300
           EDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSEVRPPYRNTI
Sbjct: 241 EDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSEVRPPYRNTI 300

Query: 301 TVPFKAWTRFGENFIKYEEEMRKICNSHKEKRMDGRKASGEEQECLD 347
           TVPFKAWTRFGENFIKYEEEMRKICNSHKEKRMDGRKASGEEQECLD
Sbjct: 301 TVPFKAWTRFGENFIKYEEEMRKICNSHKEKRMDGRKASGEEQECLD 347


>gi|62865862 purine-rich element binding protein G isoform B [Homo
           sapiens]
          Length = 322

 Score =  588 bits (1516), Expect = e-168
 Identities = 291/302 (96%), Positives = 294/302 (97%), Gaps = 1/302 (0%)

Query: 1   MERARRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQEL 60
           MERARRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQEL
Sbjct: 1   MERARRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQEL 60

Query: 61  ASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLG 120
           ASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLG
Sbjct: 61  ASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLG 120

Query: 121 DFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDN 180
           DFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDN
Sbjct: 121 DFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDN 180

Query: 181 RKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLI 240
           RKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLI
Sbjct: 181 RKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLI 240

Query: 241 EDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSEVRPPYRNTI 300
           EDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLK++   P  R  I
Sbjct: 241 EDYGEGDIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKLTNY-PKSRENI 299

Query: 301 TV 302
            +
Sbjct: 300 NL 301


>gi|5032007 purine-rich element binding protein A [Homo sapiens]
          Length = 322

 Score =  301 bits (771), Expect = 6e-82
 Identities = 172/338 (50%), Positives = 211/338 (62%), Gaps = 69/338 (20%)

Query: 8   GGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQELASKRVDI 67
           GGGGG G GG + GG G +   L    QH                   E QELASKRVDI
Sbjct: 32  GGGGGGGGGGGSGGGGGGAPGGL----QH-------------------ETQELASKRVDI 68

Query: 68  QKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDFIEHYA 127
           Q KRFYLDVKQ+++GRFLKIAEV  G        KS+LTLS+SVA E +D LGDFIEHYA
Sbjct: 69  QNKRFYLDVKQNAKGRFLKIAEVGAGGN------KSRLTLSMSVAVEFRDYLGDFIEHYA 122

Query: 128 HLGLKGHRQEHGHSKEQGSRRRQKHSAPS-PPVSVGSEEHPHSVLKTDYIERDNRKYYLD 186
            LG                        PS PP    +++ P   LK++++ R+NRKYY+D
Sbjct: 123 QLG------------------------PSQPPDLAQAQDEPRRALKSEFLVRENRKYYMD 158

Query: 187 LKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQEQTIVLPAQGMIEFRDALVQLIEDYGEG 246
           LKENQRGRFLRIRQT+ RG G+         Q QTI LPAQG+IEFRDAL +LI+DYG  
Sbjct: 159 LKENQRGRFLRIRQTVNRGPGL------GSTQGQTIALPAQGLIEFRDALAKLIDDYGV- 211

Query: 247 DIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSEVRPPYRNTITVPFKA 306
                   +++P ELPEGTS  VDNKRF+FDVGSNKYG+F++VSEV+P YRN+ITVP+K 
Sbjct: 212 --------EEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKV 263

Query: 307 WTRFGENFIKYEEEMRKICNSHKEKRMDGRKASGEEQE 344
           W +FG  F KY EEM+KI    +EKR    +   ++Q+
Sbjct: 264 WAKFGHTFCKYSEEMKKIQEKQREKRAACEQLHQQQQQ 301


>gi|15147219 purine-rich element binding protein B [Homo sapiens]
          Length = 312

 Score =  286 bits (733), Expect = 1e-77
 Identities = 165/310 (53%), Positives = 201/310 (64%), Gaps = 41/310 (13%)

Query: 49  NQAGGAAEIQELASKRVDIQKKRFYLDVKQSSRGRFLKIAEVWIGRGRQDNIRKSKLTLS 108
           ++ GG  E QELASKR+DIQ KRFYLDVKQ+++GRFLKIAEV  G        KS+LTLS
Sbjct: 23  SRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEVGAGGS------KSRLTLS 76

Query: 109 LSVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVSVGSEEHPH 168
           ++VAAE +D LGDFIEHYA LG     Q    ++E G  RR                   
Sbjct: 77  MAVAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRR------------------- 117

Query: 169 SVLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLGQE--QTIVLPA 226
             LK++++ R+NRKYYLDLKENQRGRFLRIRQT+ RG G  G      G +  QTI LPA
Sbjct: 118 -ALKSEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGGGGFGAGPGPGGLQSGQTIALPA 176

Query: 227 QGMIEFRDALVQLIEDYGEGDIEERRGGDDDPL---------ELPEGTSFRVDNKRFYFD 277
           QG+IEFRDAL +LI+DYG G+ +E  GG              ELPEGTS  VD+KRF+FD
Sbjct: 177 QGLIEFRDALAKLIDDYG-GEDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFD 235

Query: 278 VGSNKYGIFLKVSEVRPPYRNTITVPFKAWTRFGENFIKYEEEMRKICNSHKEK---RMD 334
           VG NKYG+FL+VSEV+P YRN ITVPFKAW +FG  F +Y +EM++I    ++K   R  
Sbjct: 236 VGCNKYGVFLRVSEVKPSYRNAITVPFKAWGKFGGAFCRYADEMKEIQERQRDKLYERRG 295

Query: 335 GRKASGEEQE 344
           G    GEE E
Sbjct: 296 GGSGGGEESE 305



 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 18/140 (12%)

Query: 158 PVSVGSEEHPHSVLKTDYIERDNRKYYLDLKENQRGRFLRIRQTMMRGTGMIGYFGHSLG 217
           P S G  E     L +  ++  N+++YLD+K+N +GRFL+I +    G G         G
Sbjct: 21  PASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLKIAEV---GAG---------G 68

Query: 218 QEQTIVLPAQGMIEFRDALVQLIEDY---GEGDIEERRGGDDD---PLELPEGTSFRVDN 271
            +  + L      EFRD+L   IE Y   G    E+   G ++   P    +      +N
Sbjct: 69  SKSRLTLSMAVAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALKSEFLVREN 128

Query: 272 KRFYFDVGSNKYGIFLKVSE 291
           +++Y D+  N+ G FL++ +
Sbjct: 129 RKYYLDLKENQRGRFLRIRQ 148


>gi|23510368 homeobox D11 [Homo sapiens]
          Length = 338

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 8/59 (13%)

Query: 1   MERAR---RRGGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAE 56
           +ERA+   R GGGGG   GG + GG G             + P+YAA+A    A  AAE
Sbjct: 68  LERAKWPYRGGGGGGSAGGGSSGGGPGGGGG-----GAGGYAPYYAAAAAAAAAAAAAE 121


>gi|38198663 potassium channel tetramerisation domain containing 8
           [Homo sapiens]
          Length = 473

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 26/100 (26%), Positives = 40/100 (40%)

Query: 23  SGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQELASKRVDIQKKRFYLDVKQSSRG 82
           SG S + L   +  SH         P+ A  A   Q          KK     +    + 
Sbjct: 348 SGTSCNELSTSSCDSHSEASTPQDNPSSAQQATAHQPNTLTLDRPSKKAPVQWIPPPDKR 407

Query: 83  RFLKIAEVWIGRGRQDNIRKSKLTLSLSVAAELKDCLGDF 122
           R  ++ +  I + R+ N+ K K+   LSV  E+K C+ DF
Sbjct: 408 RNSELFQTLISKSRETNLSKKKVCEKLSVEEEMKKCIQDF 447


>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
           sapiens]
          Length = 419

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 21/48 (43%), Positives = 22/48 (45%), Gaps = 2/48 (4%)

Query: 8   GGGGGRGRGGKNVGGSGLSKSRLYPQAQHS--HYPHYAASATPNQAGG 53
           GGGGG G GG   GG  L  S       HS  H  H AA+A  N   G
Sbjct: 166 GGGGGPGGGGGGPGGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSG 213


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 20/65 (30%), Positives = 28/65 (43%)

Query: 8   GGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQELASKRVDI 67
           GGGGG G GG    GSG     + P   +      A   +P +    +EI E  S R   
Sbjct: 102 GGGGGGGAGGGGSAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPY 161

Query: 68  QKKRF 72
            +++F
Sbjct: 162 YREKF 166


>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
          Length = 500

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 8   GGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATP 48
           GGGGG G G +++   GL +      A+H H+ H+ A   P
Sbjct: 242 GGGGGAGGGAQSLVHPGLVRGDTPELAEHHHHHHHHAHPHP 282


>gi|52426745 Cas-Br-M (murine) ecotropic retroviral transforming
          sequence [Homo sapiens]
          Length = 906

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 3/37 (8%)

Query: 8  GGGGGRGRGGKNVGG-SGLSKSRLYPQAQHSHY--PH 41
          G GGG G GG   GG  GL K    P   H H+  PH
Sbjct: 10 GAGGGSGSGGSGSGGLIGLMKDAFQPHHHHHHHLSPH 46


>gi|46430491 scratch 2 protein [Homo sapiens]
          Length = 307

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 5   RRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQHSH 38
           RRRGGGGG   G  + GG+G    R   QA   H
Sbjct: 120 RRRGGGGGDAGGSGDAGGAGGRAGRAGAQAGGGH 153


>gi|4758168 distal-less homeobox 2 [Homo sapiens]
          Length = 328

 Score = 32.0 bits (71), Expect = 0.84
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 5   RRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQELA 61
           +R  GGGG G GG   G SG S S     A   +YP Y  +     +G A+ +Q  A
Sbjct: 247 QRMAGGGGPGSGGSGAGSSGSSPSSA-ASAFLGNYPWYHQT-----SGSASHLQATA 297


>gi|154448890 THO complex 1 [Homo sapiens]
          Length = 657

 Score = 32.0 bits (71), Expect = 0.84
 Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 28/110 (25%)

Query: 241 EDYGEG-DIEERRGGDDDPLELPEGTSFRVDNKRFYFDVGSNKYGIFLKVSEVRPPYRNT 299
           ED  EG D+EE   GD+   E P   S  +D            Y ++ K   ++  +RN 
Sbjct: 204 EDREEGMDVEEGEMGDE---EAPTTCSIPID------------YNLYRKFWSLQDYFRNP 248

Query: 300 ITVPFK-AWTRFGENFIKYEEEMRKICNSHK-------EKRMDGRKASGE 341
           +    K +W    + F+KY EE+  +  S+K        K+M+  K  GE
Sbjct: 249 VQCYEKISW----KTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGE 294


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 5   RRRGGGGG--RGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGA 54
           + RGGGG   RG GG    GSG +KSR   +A  S   H    A   + GGA
Sbjct: 722 KSRGGGGAKSRGSGGAKSRGSGGAKSRSGKKAAASK-SHGGGGAKRRRGGGA 772


>gi|51479145 brefeldin A-inhibited guanine nucleotide-exchange
           protein 1 [Homo sapiens]
          Length = 1849

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 2/89 (2%)

Query: 143 EQGSRRRQKHSAPSPPVSVGSEEHPHSVLKTDYIERDNRKYYLDLKENQRGRFLRIRQTM 202
           E+     +K S P      GS   P    KT++IE D  KY+L  +   + +  RI  T 
Sbjct: 42  EEIKAETEKQSPPHGEAKAGSSTLPPVKSKTNFIEAD--KYFLPFELACQSKCPRIVSTS 99

Query: 203 MRGTGMIGYFGHSLGQEQTIVLPAQGMIE 231
           +     +  +GH  G       P + +I+
Sbjct: 100 LDCLQKLIAYGHLTGNAPDSTTPGKKLID 128


>gi|45439359 triple functional domain (PTPRF interacting) [Homo
            sapiens]
          Length = 3097

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 15/59 (25%)

Query: 8    GGGGGRGRGGKNVGGSG-------------LSKSR--LYPQAQHSHYPHYAASATPNQA 51
            GGGGG G GG   GGSG              S+SR    PQ    H P   +SA  +QA
Sbjct: 2303 GGGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQPVRHHPPVLVSSAASSQA 2361



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 8/58 (13%)

Query: 8    GGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATPNQAGGAAEIQELASKRV 65
            GGGGG G GG   GG G S     P     H      S  P+  GGA         R+
Sbjct: 2292 GGGGGGGSGGS--GGGGGSGGGGAPSGGSGH------SGGPSSCGGAPSTSRSRPSRI 2341


>gi|122937424 one cut homeobox 3 [Homo sapiens]
          Length = 494

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 10/65 (15%)

Query: 8   GGGGGRGRGGKNVGGSGLSKSRLYP----QAQHSHYPHYAASATPNQAGG---AAEIQEL 60
           GGGGG G GG    GSG +   L P     A  +H PH          GG    A  +E+
Sbjct: 265 GGGGGTGSGG---AGSGSAAGLLAPLGGLAAAGAHGPHGGGGGPGGSGGGPSAGAAAEEI 321

Query: 61  ASKRV 65
            +K V
Sbjct: 322 NTKEV 326


>gi|44917619 kelch domain containing 10 [Homo sapiens]
          Length = 442

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 6/46 (13%)

Query: 2  ERARRRGGG------GGRGRGGKNVGGSGLSKSRLYPQAQHSHYPH 41
          +R RRRGGG      GG G GG + G  G    +L    Q S  PH
Sbjct: 8  DRNRRRGGGAAGAGGGGSGAGGGSGGSGGRGTGQLNRFVQLSGRPH 53


>gi|160707950 methyl CpG binding protein 2 isoform 2 [Homo sapiens]
          Length = 498

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 101 RKSKLTLSLSVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVS 160
           RK++ T+S+ V   +K  L   +   +  GLK  +     SKE   + R   SA SPP  
Sbjct: 318 RKTRETVSIEVKEVVKPLLVSTLGEKSGKGLKTCKSPGRKSKESSPKGRSS-SASSPPKK 376

Query: 161 VGSEEHPHS 169
                H HS
Sbjct: 377 EHHHHHHHS 385


>gi|4826830 methyl CpG binding protein 2 isoform 1 [Homo sapiens]
          Length = 486

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 101 RKSKLTLSLSVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQGSRRRQKHSAPSPPVS 160
           RK++ T+S+ V   +K  L   +   +  GLK  +     SKE   + R   SA SPP  
Sbjct: 306 RKTRETVSIEVKEVVKPLLVSTLGEKSGKGLKTCKSPGRKSKESSPKGRSS-SASSPPKK 364

Query: 161 VGSEEHPHS 169
                H HS
Sbjct: 365 EHHHHHHHS 373


>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
           isoform [Homo sapiens]
          Length = 302

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/23 (65%), Positives = 15/23 (65%)

Query: 3   RARRRGGGGGRGRGGKNVGGSGL 25
           R R RG G GRGRG    GGSGL
Sbjct: 82  RGRGRGRGRGRGRGRPPSGGSGL 104


>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
           sapiens]
          Length = 411

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/23 (65%), Positives = 15/23 (65%)

Query: 3   RARRRGGGGGRGRGGKNVGGSGL 25
           R R RG G GRGRG    GGSGL
Sbjct: 82  RGRGRGRGRGRGRGRPPSGGSGL 104


>gi|4503765 fragile X mental retardation 1 [Homo sapiens]
          Length = 632

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 12/17 (70%), Positives = 14/17 (82%)

Query: 6   RRGGGGGRGRGGKNVGG 22
           RR GGGGRG+GG+  GG
Sbjct: 532 RRRGGGGRGQGGRGRGG 548


>gi|116006951 polycystin 1-like 2 isoform a [Homo sapiens]
          Length = 2459

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 109  LSVAAELKDCLGDFIEHYAHLGLKGHRQEHGHSKEQ-GSRRRQKHSAPS 156
            LS   E+ D L   ++  + LG+K  R+E G S+EQ GS  + +HS P+
Sbjct: 2407 LSEEGEIVDLL--LMKILSFLGIKSKREEPGSSREQPGSLSQTRHSRPA 2453


>gi|41281831 neuronal PAS domain protein 3 isoform 2 [Homo sapiens]
          Length = 920

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 14/24 (58%), Positives = 14/24 (58%)

Query: 8   GGGGGRGRGGKNVGGSGLSKSRLY 31
           GGGGG G GG   GG   S S LY
Sbjct: 750 GGGGGGGGGGAGGGGPSASNSLLY 773


>gi|11545847 neuronal PAS domain protein 3 isoform 1 [Homo sapiens]
          Length = 901

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 14/24 (58%), Positives = 14/24 (58%)

Query: 8   GGGGGRGRGGKNVGGSGLSKSRLY 31
           GGGGG G GG   GG   S S LY
Sbjct: 731 GGGGGGGGGGAGGGGPSASNSLLY 754


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
           sapiens]
          Length = 1941

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 2   ERARRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQH-------SHYPHYAASATPNQ 50
           + A   G GGG  +GGK  G S  + S L+ +  +       S +PH+     PN+
Sbjct: 628 QTAEGEGAGGGAKKGGKKKGSSFQTVSALFRENLNKLMTNLRSTHPHFVRCIIPNE 683


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
           sapiens]
          Length = 1941

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 2   ERARRRGGGGGRGRGGKNVGGSGLSKSRLYPQAQH-------SHYPHYAASATPNQ 50
           + A   G GGG  +GGK  G S  + S L+ +  +       S +PH+     PN+
Sbjct: 628 QTAEGEGAGGGAKKGGKKKGSSFQTVSALFRENLNKLMTNLRSTHPHFVRCIIPNE 683


>gi|33620755 YEATS domain containing 2 [Homo sapiens]
          Length = 1422

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 16/41 (39%), Positives = 18/41 (43%)

Query: 8   GGGGGRGRGGKNVGGSGLSKSRLYPQAQHSHYPHYAASATP 48
           GGGG  G GG   GG   S +     +QH  Y  Y    TP
Sbjct: 818 GGGGSTGGGGGTAGGGTQSTAGPGGISQHLTYTSYILKQTP 858


>gi|169214870 PREDICTED: similar to hCG2041260 [Homo sapiens]
          Length = 412

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 2/26 (7%)

Query: 2   ERARRRGGGGG--RGRGGKNVGGSGL 25
           ER+ RRG G G  R +G +++GGSGL
Sbjct: 94  ERSERRGAGAGDERRKGAQHLGGSGL 119


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,271,968
Number of Sequences: 37866
Number of extensions: 676727
Number of successful extensions: 4639
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 4205
Number of HSP's gapped (non-prelim): 356
length of query: 347
length of database: 18,247,518
effective HSP length: 103
effective length of query: 244
effective length of database: 14,347,320
effective search space: 3500746080
effective search space used: 3500746080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.