Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 7019491
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7019491 DNA-directed DNA polymerase lambda [Homo sapiens]
(575 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7019491 DNA-directed DNA polymerase lambda [Homo sapiens] 1160 0.0
gi|4505931 DNA-directed DNA polymerase beta [Homo sapiens] 189 8e-48
gi|7019493 DNA-directed DNA polymerase mu [Homo sapiens] 177 2e-44
gi|63054850 terminal deoxynucleotidyltransferase isoform 1 [Homo... 124 2e-28
gi|63054852 terminal deoxynucleotidyltransferase isoform 2 [Homo... 120 3e-27
gi|149944526 additional sex combs like 3 [Homo sapiens] 42 0.002
gi|169213924 PREDICTED: leucine rich repeat containing 68 [Homo ... 41 0.003
gi|169214345 PREDICTED: leucine rich repeat containing 68 [Homo ... 41 0.003
gi|169213302 PREDICTED: leucine rich repeat containing 68 [Homo ... 41 0.003
gi|26190608 synaptojanin 2 [Homo sapiens] 41 0.003
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 39 0.017
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 38 0.022
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 38 0.022
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 38 0.022
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 38 0.022
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a... 38 0.029
gi|224994173 roundabout 1 isoform d [Homo sapiens] 37 0.038
gi|224994171 roundabout 1 isoform c [Homo sapiens] 37 0.038
gi|19743806 roundabout 1 isoform b [Homo sapiens] 37 0.038
gi|239748173 PREDICTED: similar to roundabout 1 isoform 1 [Homo ... 37 0.038
gi|239748171 PREDICTED: similar to roundabout 1 isoform 2 [Homo ... 37 0.038
gi|4506569 roundabout 1 isoform a [Homo sapiens] 37 0.038
gi|239740955 PREDICTED: similar to c114 SLIT-like testicular pro... 37 0.049
gi|239740953 PREDICTED: similar to c114 SLIT-like testicular pro... 37 0.049
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 37 0.049
gi|116325993 c114 SLIT-like testicular protein [Homo sapiens] 37 0.049
gi|110665701 leucine rich repeat containing 37A [Homo sapiens] 37 0.049
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 37 0.064
gi|7706687 Enah/Vasp-like [Homo sapiens] 37 0.064
gi|153792074 proline rich 12 [Homo sapiens] 36 0.084
>gi|7019491 DNA-directed DNA polymerase lambda [Homo sapiens]
Length = 575
Score = 1160 bits (3002), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 1 MDPRGILKAFPKRQKIHADASSKVLAKIPRREEGEEAEEWLSSLRAHVVRTGIGRARAEL 60
MDPRGILKAFPKRQKIHADASSKVLAKIPRREEGEEAEEWLSSLRAHVVRTGIGRARAEL
Sbjct: 1 MDPRGILKAFPKRQKIHADASSKVLAKIPRREEGEEAEEWLSSLRAHVVRTGIGRARAEL 60
Query: 61 FEKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQ 120
FEKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQ
Sbjct: 61 FEKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQ 120
Query: 121 ERRLVDVAGFSIFIPSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQ 180
ERRLVDVAGFSIFIPSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQ
Sbjct: 121 ERRLVDVAGFSIFIPSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQ 180
Query: 181 KAKEAPNTQAQPISDDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPAPAVLDKWV 240
KAKEAPNTQAQPISDDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPAPAVLDKWV
Sbjct: 181 KAKEAPNTQAQPISDDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPAPAVLDKWV 240
Query: 241 CAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEAC 300
CAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEAC
Sbjct: 241 CAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEAC 300
Query: 301 SIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSL 360
SIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSL
Sbjct: 301 SIPGIGKRMAEKIIEILESGHLRKLDHISESVPVLELFSNIWGAGTKTAQMWYQQGFRSL 360
Query: 361 EDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRR 420
EDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRR
Sbjct: 361 EDIRSQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACGSYRR 420
Query: 421 GKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLP 480
GKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLP
Sbjct: 421 GKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQKYLGVCRLP 480
Query: 481 GPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNT 540
GPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNT
Sbjct: 481 GPGRRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSTAVVRNT 540
Query: 541 HGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW 575
HGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW
Sbjct: 541 HGCKVGPGRVLPTPTEKDVFRLLGLPYREPAERDW 575
>gi|4505931 DNA-directed DNA polymerase beta [Homo sapiens]
Length = 335
Score = 189 bits (479), Expect = 8e-48
Identities = 118/345 (34%), Positives = 188/345 (54%), Gaps = 29/345 (8%)
Query: 245 SSQKATNHNLH--ITEKLEVLA---KAYSVQGDKWRALGYAKAINALKSFHKPVTSYQEA 299
S +KA L+ IT+ L LA K S K+ A Y KA + + + + S EA
Sbjct: 2 SKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNA--YRKAASVIAKYPHKIKSGAEA 59
Query: 300 CSIPGIGKRMAEKIIEILESGHLRKLDHI--SESVPVLELFSNIWGAGTKTAQMWYQQGF 357
+PG+G ++AEKI E L +G LRKL+ I ++ + + + G G A+ + +G
Sbjct: 60 KKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGI 119
Query: 358 RSLEDIR-SQASLTTQQAIGLKHYSDFLERMPREEATEIEQTVQKAAQAFNSGLLCVACG 416
++LED+R ++ L Q IGLK++ DF +R+PREE +++ V + +S + CG
Sbjct: 120 KTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCG 179
Query: 417 SYRRGKATCGDVDVLITHP----DGRSHRGIFSRLLDSLRQEGFLTDDLVSQEENGQQQK 472
S+RRG + GD+DVL+THP + + ++++ L++ F+TD L E K
Sbjct: 180 SFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGE-----TK 234
Query: 473 YLGVCRLPGPGRR----HRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLS 528
++GVC+LP HRR+DI ++P ++ C +LYFTGS FN++MRA A KG +++
Sbjct: 235 FMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTIN 294
Query: 529 EHALSTAVVRNTHGCKVGPGRVLPTPTEKDVFRLLGLPYREPAER 573
E+ + V G LP +EKD+F + YREP +R
Sbjct: 295 EYTIRPLGVTGV------AGEPLPVDSEKDIFDYIQWKYREPKDR 333
>gi|7019493 DNA-directed DNA polymerase mu [Homo sapiens]
Length = 494
Score = 177 bits (449), Expect = 2e-44
Identities = 129/443 (29%), Positives = 209/443 (47%), Gaps = 62/443 (13%)
Query: 182 AKEAPNTQAQPISDDEASDGEETQVSAADL----EALISGHYPTSLEGDCEPSP------ 231
+ EA + + S +EA +E +++AA AL+ + T G +P P
Sbjct: 63 SSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLDISWLTESLGAGQPVPVECRHR 122
Query: 232 -----------APAVLDKWVCAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYA 280
+PA + + C +P+ T+HN ++E LE+LA+A +G + R L +
Sbjct: 123 LEVAGPRKGPLSPAWMPAYACQRPTP--LTHHNTGLSEALEILAEAAGFEGSEGRLLTFC 180
Query: 281 KAINALKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHI--SESVPVLELF 338
+A + LK+ PVT+ + +P G+ + + E+LE G +++ + SE ++LF
Sbjct: 181 RAASVLKALPSPVTTLSQLQGLPHFGEHSSRVVQELLEHGVCEEVERVRRSERYQTMKLF 240
Query: 339 SNIWGAGTKTAQMWYQQGFRSLEDIRSQAS-LTTQQAIGLKHYSDFLERMPREEATEIEQ 397
+ I+G G KTA WY++G R+L+D+R Q LT QQ GL+H+ D + R + ++Q
Sbjct: 241 TQIFGVGVKTADRWYREGLRTLDDLREQPQKLTQQQKAGLQHHQDLSTPVLRSDVDALQQ 300
Query: 398 TVQKAAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDGRSHRGIFSRLLDSLRQEGFL 457
V++A G G +RRGK DVD LITHP G+ R++ L+ +G +
Sbjct: 301 VVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHPKEGQEAGLLPRVMCRLQDQGLI 360
Query: 458 ------------TDDLVSQEENGQQQKYLGVCRLPGP-----GRRHR--------RLDII 492
L Q ++ + RLP P G R R+D++
Sbjct: 361 LYHQHQHSCCESPTRLAQQSHMDAFERSFCIFRLPQPPGAAVGGSTRPCPSWKAVRVDLV 420
Query: 493 VVPYSEFACALLYFTGSAHFNRSMRALA-KTKGMSLSEHALSTAVVRNTHGCKVGPGRVL 551
V P S+F ALL +TGS F R +R + K KG+ L+ H L +
Sbjct: 421 VAPVSQFPFALLGWTGSKLFQRELRRFSRKEKGLWLNSHGLFDPEQKT----------FF 470
Query: 552 PTPTEKDVFRLLGLPYREPAERD 574
+E+D+FR LGL Y P +R+
Sbjct: 471 QAASEEDIFRHLGLEYLPPEQRN 493
>gi|63054850 terminal deoxynucleotidyltransferase isoform 1 [Homo
sapiens]
Length = 509
Score = 124 bits (312), Expect = 2e-28
Identities = 106/381 (27%), Positives = 172/381 (45%), Gaps = 47/381 (12%)
Query: 229 PSPAPAVLDKWVCAQPSSQKAT---NHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINA 285
P P + K +Q + Q+ T N N T+ ++LA+ + ++ + + +A +
Sbjct: 140 PKTPPIAVQK--ISQYACQRRTTLNNCNQIFTDAFDILAENCEFRENEDSCVTFMRAASV 197
Query: 286 LKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHI--SESVPVLELFSNIWG 343
LKS + S ++ IP +G ++ I EI+E G ++ + E +LF++++G
Sbjct: 198 LKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAVLNDERYQSFKLFTSVFG 257
Query: 344 AGTKTAQMWYQQGFRSLEDIRSQASL--TTQQAIGLKHYSDFLERMPREEATEIEQTVQK 401
G KT++ W++ GFR+L +RS SL T Q G +Y D + + R EA + V++
Sbjct: 258 VGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLVSCVTRAEAEAVSVLVKE 317
Query: 402 AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDG-RSHRGIFSRLLDSLRQEGFLT-D 459
A AF G +RRGK DVD LIT P + ++++ ++G L
Sbjct: 318 AVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQKVMNLWEKKGLLLYY 377
Query: 460 DLVSQ------------EENGQQQKYLGVCRLP-------------GPGRRHRRLDIIVV 494
DLV + QK + +LP G + R+D+++
Sbjct: 378 DLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSSWQEGKTWKAIRVDLVLC 437
Query: 495 PYSEFACALLYFTGSAHFNRSMRALA-KTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPT 553
PY A ALL +TGS F R +R A + M L HAL R L
Sbjct: 438 PYERRAFALLGWTGSRQFERDLRRYATHERKMILDNHALYDKTKR----------IFLKA 487
Query: 554 PTEKDVFRLLGLPYREPAERD 574
+E+++F LGL Y EP ER+
Sbjct: 488 ESEEEIFAHLGLDYIEPWERN 508
>gi|63054852 terminal deoxynucleotidyltransferase isoform 2 [Homo
sapiens]
Length = 508
Score = 120 bits (301), Expect = 3e-27
Identities = 106/381 (27%), Positives = 172/381 (45%), Gaps = 48/381 (12%)
Query: 229 PSPAPAVLDKWVCAQPSSQKAT---NHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINA 285
P P + K +Q + Q+ T N N T+ ++LA+ + ++ + + +A +
Sbjct: 140 PKTPPIAVQK--ISQYACQRRTTLNNCNQIFTDAFDILAENCEFRENEDSCVTFMRAASV 197
Query: 286 LKSFHKPVTSYQEACSIPGIGKRMAEKIIEILESGHLRKLDHI--SESVPVLELFSNIWG 343
LKS + S ++ IP +G ++ I EI+E G ++ + E +LF++++G
Sbjct: 198 LKSLPFTIISMKDTEGIPCLGSKVKGIIEEIIEDGESSEVKAVLNDERYQSFKLFTSVFG 257
Query: 344 AGTKTAQMWYQQGFRSLEDIRSQASL--TTQQAIGLKHYSDFLERMPREEATEIEQTVQK 401
G KT++ W++ GFR+L +RS SL T Q G +Y D + + R EA + V++
Sbjct: 258 VGLKTSEKWFRMGFRTLSKVRSDKSLKFTRMQKAGFLYYEDLVSCVTRAEAEAVSVLVKE 317
Query: 402 AAQAFNSGLLCVACGSYRRGKATCGDVDVLITHPDG-RSHRGIFSRLLDSLRQEGFLT-D 459
A AF G +RRGK DVD LIT P + ++++ ++G L
Sbjct: 318 AVWAFLPDAFVTMTGGFRRGKKMGHDVDFLITSPGSTEDEEQLLQKVMNLWEKKGLLLYY 377
Query: 460 DLVSQ------------EENGQQQKYLGVCRLP-------------GPGRRHRRLDIIVV 494
DLV + QK + +LP G + R+D+++
Sbjct: 378 DLVESTFEKLRLPSRKVDALDHFQKCFLIFKLPRQRVDSDQSSWQEGKTWKAIRVDLVLC 437
Query: 495 PYSEFACALLYFTGSAHFNRSMRALA-KTKGMSLSEHALSTAVVRNTHGCKVGPGRVLPT 553
PY A ALL +TGS F R +R A + M L HAL R L
Sbjct: 438 PYERRAFALLGWTGS-RFERDLRRYATHERKMILDNHALYDKTKR----------IFLKA 486
Query: 554 PTEKDVFRLLGLPYREPAERD 574
+E+++F LGL Y EP ER+
Sbjct: 487 ESEEEIFAHLGLDYIEPWERN 507
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 41.6 bits (96), Expect = 0.002
Identities = 25/67 (37%), Positives = 32/67 (47%), Gaps = 10/67 (14%)
Query: 126 DVAGFSIFIPSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEA 185
+V G + +P++ L HP P PP L AL PPPPP P+ PP E
Sbjct: 2001 EVGGTAHTMPNKALVHPPPPP-------PPPPPPPL---ALPPPPPPPPPLPPPLPNAEV 2050
Query: 186 PNTQAQP 192
P+ Q QP
Sbjct: 2051 PSDQKQP 2057
>gi|169213924 PREDICTED: leucine rich repeat containing 68 [Homo
sapiens]
Length = 625
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 145 SKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPISD-DEASDGEE 203
++ ++ PP ++ +T + P P P + Q AP+ P SD D SDGEE
Sbjct: 471 AREREEKEQPPQLSASMPETTATEPQPDDEPAAGVQNG--APSPAPSPDSDSDSDSDGEE 528
Query: 204 TQVSAADLEALISGHYPTSLEGDCEPSPAP 233
+ + + SG T G EP P P
Sbjct: 529 EEEEEGERDETPSGAIDTRDTGSSEPQPPP 558
>gi|169214345 PREDICTED: leucine rich repeat containing 68 [Homo
sapiens]
Length = 625
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 145 SKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPISD-DEASDGEE 203
++ ++ PP ++ +T + P P P + Q AP+ P SD D SDGEE
Sbjct: 471 AREREEKEQPPQLSASMPETTATEPQPDDEPAAGVQNG--APSPAPSPDSDSDSDSDGEE 528
Query: 204 TQVSAADLEALISGHYPTSLEGDCEPSPAP 233
+ + + SG T G EP P P
Sbjct: 529 EEEEEGERDETPSGAIDTRDTGSSEPQPPP 558
>gi|169213302 PREDICTED: leucine rich repeat containing 68 [Homo
sapiens]
Length = 625
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 145 SKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPISD-DEASDGEE 203
++ ++ PP ++ +T + P P P + Q AP+ P SD D SDGEE
Sbjct: 471 AREREEKEQPPQLSASMPETTATEPQPDDEPAAGVQNG--APSPAPSPDSDSDSDSDGEE 528
Query: 204 TQVSAADLEALISGHYPTSLEGDCEPSPAP 233
+ + + SG T G EP P P
Sbjct: 529 EEEEEGERDETPSGAIDTRDTGSSEPQPPP 558
>gi|26190608 synaptojanin 2 [Homo sapiens]
Length = 1496
Score = 41.2 bits (95), Expect = 0.003
Identities = 32/96 (33%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Query: 146 KAEQDASIPPGTHE--ALLQTALSPPPPPTRP------VSPPQKAKEAPNTQAQPISDDE 197
K+ DASI GTH ++LQTA P P +P +S P K+ T AQ + E
Sbjct: 1121 KSASDASISSGTHGQYSILQTARLLPGAPQQPPKARTGISKPYNVKQIKTTNAQ---EAE 1177
Query: 198 ASDGEETQVSAADLEALISGHYPTSLEGDCEPSPAP 233
A+ + E +S P LE EP P P
Sbjct: 1178 AAIRCLLEARGGASEEALSAVAPRDLEASSEPEPTP 1213
Score = 30.0 bits (66), Expect = 6.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 133 FIPSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPP---PPTRPVSPPQKAKEAP 186
F P + + P K D + PPG ++ PPP PP P PP++ K AP
Sbjct: 1292 FQPGKAAERPSHRKPASDEA-PPGAGASV------PPPLEAPPLVPKVPPRRKKSAP 1341
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 38.5 bits (88), Expect = 0.017
Identities = 32/106 (30%), Positives = 39/106 (36%), Gaps = 9/106 (8%)
Query: 137 RYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPISDD 196
R P S E S+PP E + T+L P P S P A E P+T P D+
Sbjct: 136 RNTSRPPTSSEEPSTSVPPTASE-VPSTSLPPTPGEGTSTSVPPTAYEGPSTSVVPTPDE 194
Query: 197 EAS--------DGEETQVSAADLEALISGHYPTSLEGDCEPSPAPA 234
S +G T V A E L + T EG P A
Sbjct: 195 GPSTSVLPTPGEGPGTSVPLAATEGLSTSVQATPDEGPSTSVPPTA 240
Score = 35.0 bits (79), Expect = 0.19
Identities = 29/92 (31%), Positives = 34/92 (36%), Gaps = 17/92 (18%)
Query: 152 SIPPGTHEALLQTALSPPPPPTRPVSP----PQKAKEAPNTQAQPISDDEAS-------- 199
S+PP E L S P PPTR P P E P+T P + D S
Sbjct: 235 SVPPTATEGL-----STPVPPTRDEGPSTSVPATPGEGPSTSVLPAASDGQSISLVPTRG 289
Query: 200 DGEETQVSAADLEALISGHYPTSLEGDCEPSP 231
G T V E L + PT+ EG P
Sbjct: 290 KGSSTSVPPTATEGLSTSVQPTAGEGSSTSVP 321
Score = 32.3 bits (72), Expect = 1.2
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
Query: 143 QPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPISDD------ 196
QP+ E ++ P T L T++ P S P E P+T PI +
Sbjct: 309 QPTAGEGSSTSVPPTPGGGLSTSVPPTATEELSTSVPPTPGEGPSTSVLPIPGEGLSTSV 368
Query: 197 --EASDGEETQVSAADLEALISGHYPTSLEG 225
ASDG +T V E + PT+ +G
Sbjct: 369 PPTASDGSDTSVPPTPGEGASTLVQPTAPDG 399
>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2790
Score = 38.1 bits (87), Expect = 0.022
Identities = 58/205 (28%), Positives = 80/205 (39%), Gaps = 43/205 (20%)
Query: 53 IGRARAELFEKQIVQHGGQLCPAQGPGVTH--IVVDEGMDYERALRLLRLPQLPPGAQLV 110
+G ++ + F HG +L PAQ G++ V+ EG + +AL P+LP
Sbjct: 328 LGFSKPQAFMDHTQSHGVKLTPAQYQGLSGSPAVLQEGDEGCKALISFLEPKLP------ 381
Query: 111 KSAWLSLCLQERRLVDVAGFSIFIPSRYLDHPQPSKAEQD-ASIPPGTHEALLQT----- 164
A S IP LD+ E + A G EA +Q
Sbjct: 382 -----------------ARPSSDIP---LDNSSTVNMEANVAQTEDGPPEAEVQALILLD 421
Query: 165 ----ALSPPPPPTRPVSP-PQKAKEAPNTQAQPISDDEASDGEETQVSAADLEALISGHY 219
ALSPP PPT P P +AKE+P A D +G+E L ++
Sbjct: 422 EEVMALSPPSPPTATWDPSPTQAKESP-VAAGEAGPDWFPEGQEED---GGLCPPLNQSS 477
Query: 220 PTSLEGDCEPSPAPAVLDKWVCAQP 244
PTS EG P+P + D QP
Sbjct: 478 PTSKEGGTLPAPVGSPEDPSDPPQP 502
Score = 33.5 bits (75), Expect = 0.54
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 153 IPPGTHEALLQTA-----LSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVS 207
+PPG EA T L PPPPP+ P + K +P ++A +S + SD + ++
Sbjct: 2199 LPPGK-EATTPTPEPPLPLLPPPPPSEEEGPEEPPKASPESEACSLSAGDLSDSSASSLA 2257
>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 38.1 bits (87), Expect = 0.022
Identities = 58/205 (28%), Positives = 80/205 (39%), Gaps = 43/205 (20%)
Query: 53 IGRARAELFEKQIVQHGGQLCPAQGPGVTH--IVVDEGMDYERALRLLRLPQLPPGAQLV 110
+G ++ + F HG +L PAQ G++ V+ EG + +AL P+LP
Sbjct: 244 LGFSKPQAFMDHTQSHGVKLTPAQYQGLSGSPAVLQEGDEGCKALISFLEPKLP------ 297
Query: 111 KSAWLSLCLQERRLVDVAGFSIFIPSRYLDHPQPSKAEQD-ASIPPGTHEALLQT----- 164
A S IP LD+ E + A G EA +Q
Sbjct: 298 -----------------ARPSSDIP---LDNSSTVNMEANVAQTEDGPPEAEVQALILLD 337
Query: 165 ----ALSPPPPPTRPVSP-PQKAKEAPNTQAQPISDDEASDGEETQVSAADLEALISGHY 219
ALSPP PPT P P +AKE+P A D +G+E L ++
Sbjct: 338 EEVMALSPPSPPTATWDPSPTQAKESP-VAAGEAGPDWFPEGQEED---GGLCPPLNQSS 393
Query: 220 PTSLEGDCEPSPAPAVLDKWVCAQP 244
PTS EG P+P + D QP
Sbjct: 394 PTSKEGGTLPAPVGSPEDPSDPPQP 418
Score = 33.5 bits (75), Expect = 0.54
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 153 IPPGTHEALLQTA-----LSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVS 207
+PPG EA T L PPPPP+ P + K +P ++A +S + SD + ++
Sbjct: 2115 LPPGK-EATTPTPEPPLPLLPPPPPSEEEGPEEPPKASPESEACSLSAGDLSDSSASSLA 2173
>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 38.1 bits (87), Expect = 0.022
Identities = 58/205 (28%), Positives = 80/205 (39%), Gaps = 43/205 (20%)
Query: 53 IGRARAELFEKQIVQHGGQLCPAQGPGVTH--IVVDEGMDYERALRLLRLPQLPPGAQLV 110
+G ++ + F HG +L PAQ G++ V+ EG + +AL P+LP
Sbjct: 244 LGFSKPQAFMDHTQSHGVKLTPAQYQGLSGSPAVLQEGDEGCKALISFLEPKLP------ 297
Query: 111 KSAWLSLCLQERRLVDVAGFSIFIPSRYLDHPQPSKAEQD-ASIPPGTHEALLQT----- 164
A S IP LD+ E + A G EA +Q
Sbjct: 298 -----------------ARPSSDIP---LDNSSTVNMEANVAQTEDGPPEAEVQALILLD 337
Query: 165 ----ALSPPPPPTRPVSP-PQKAKEAPNTQAQPISDDEASDGEETQVSAADLEALISGHY 219
ALSPP PPT P P +AKE+P A D +G+E L ++
Sbjct: 338 EEVMALSPPSPPTATWDPSPTQAKESP-VAAGEAGPDWFPEGQEED---GGLCPPLNQSS 393
Query: 220 PTSLEGDCEPSPAPAVLDKWVCAQP 244
PTS EG P+P + D QP
Sbjct: 394 PTSKEGGTLPAPVGSPEDPSDPPQP 418
Score = 33.5 bits (75), Expect = 0.54
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 153 IPPGTHEALLQTA-----LSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVS 207
+PPG EA T L PPPPP+ P + K +P ++A +S + SD + ++
Sbjct: 2115 LPPGK-EATTPTPEPPLPLLPPPPPSEEEGPEEPPKASPESEACSLSAGDLSDSSASSLA 2173
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 38.1 bits (87), Expect = 0.022
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 132 IFIPSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKA---KEAPNT 188
+++PS+ L H P +S+PPG+ +A P P RPV K K+ P
Sbjct: 329 LWLPSKSLPH-LPGTPRPTSSLPPGSVKAAPAQVRPPSPGNIRPVKREVKVEPEKKDPEK 387
Query: 189 QAQPISDDEASDGEETQVSAADLEALISGHYPTSLE-GDCEPSPAPA 234
+ Q ++++ + G V EA + P E G P+ APA
Sbjct: 388 EPQKVANEPSLKGRAPLVKVE--EATVEERTPAEPEVGPAAPAMAPA 432
>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
[Homo sapiens]
Length = 876
Score = 37.7 bits (86), Expect = 0.029
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 16/95 (16%)
Query: 138 YLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPISDDE 197
Y + + +KAE++ +PP PPP P + E P+ QA + DD
Sbjct: 136 YSEEERNAKAEKEKKLPP-------------PPPQAPPEEENESEPEEPSGQAGGLQDDS 182
Query: 198 A---SDGEETQVSAADLEALISGHYPTSLEGDCEP 229
+ DG+ + V A ++ + TS E C P
Sbjct: 183 SGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFP 217
>gi|224994173 roundabout 1 isoform d [Homo sapiens]
Length = 1551
Score = 37.4 bits (85), Expect = 0.038
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 166 LSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVSAADLEA--------LISG 217
+SPPPPP RP+SPP + P+ D +D E + AD+E L+ G
Sbjct: 1196 VSPPPPP-RPISPP----HTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRG 1250
Query: 218 --HYPTSLEGDCEPSPAPAVLDKW 239
P S GD E S ++++ W
Sbjct: 1251 LEQTPASSVGDLESSVTGSMINGW 1274
>gi|224994171 roundabout 1 isoform c [Homo sapiens]
Length = 1606
Score = 37.4 bits (85), Expect = 0.038
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 166 LSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVSAADLEA--------LISG 217
+SPPPPP RP+SPP + P+ D +D E + AD+E L+ G
Sbjct: 1251 VSPPPPP-RPISPP----HTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRG 1305
Query: 218 --HYPTSLEGDCEPSPAPAVLDKW 239
P S GD E S ++++ W
Sbjct: 1306 LEQTPASSVGDLESSVTGSMINGW 1329
>gi|19743806 roundabout 1 isoform b [Homo sapiens]
Length = 1612
Score = 37.4 bits (85), Expect = 0.038
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 166 LSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVSAADLEA--------LISG 217
+SPPPPP RP+SPP + P+ D +D E + AD+E L+ G
Sbjct: 1257 VSPPPPP-RPISPP----HTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRG 1311
Query: 218 --HYPTSLEGDCEPSPAPAVLDKW 239
P S GD E S ++++ W
Sbjct: 1312 LEQTPASSVGDLESSVTGSMINGW 1335
>gi|239748173 PREDICTED: similar to roundabout 1 isoform 1 [Homo
sapiens]
Length = 1562
Score = 37.4 bits (85), Expect = 0.038
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 166 LSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVSAADLEA--------LISG 217
+SPPPPP RP+SPP + P+ D +D E + AD+E L+ G
Sbjct: 1207 VSPPPPP-RPISPP----HTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRG 1261
Query: 218 --HYPTSLEGDCEPSPAPAVLDKW 239
P S GD E S ++++ W
Sbjct: 1262 LEQTPASSVGDLESSVTGSMINGW 1285
>gi|239748171 PREDICTED: similar to roundabout 1 isoform 2 [Homo
sapiens]
Length = 1615
Score = 37.4 bits (85), Expect = 0.038
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 166 LSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVSAADLEA--------LISG 217
+SPPPPP RP+SPP + P+ D +D E + AD+E L+ G
Sbjct: 1260 VSPPPPP-RPISPP----HTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRG 1314
Query: 218 --HYPTSLEGDCEPSPAPAVLDKW 239
P S GD E S ++++ W
Sbjct: 1315 LEQTPASSVGDLESSVTGSMINGW 1338
>gi|4506569 roundabout 1 isoform a [Homo sapiens]
Length = 1651
Score = 37.4 bits (85), Expect = 0.038
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 166 LSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVSAADLEA--------LISG 217
+SPPPPP RP+SPP + P+ D +D E + AD+E L+ G
Sbjct: 1296 VSPPPPP-RPISPP----HTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRG 1350
Query: 218 --HYPTSLEGDCEPSPAPAVLDKW 239
P S GD E S ++++ W
Sbjct: 1351 LEQTPASSVGDLESSVTGSMINGW 1374
>gi|239740955 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 1 [Homo sapiens]
Length = 1635
Score = 37.0 bits (84), Expect = 0.049
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 135 PSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPIS 194
P ++ + +PS +Q+A I P + ++S P +P P++ + +P Q P
Sbjct: 326 PIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETP-- 383
Query: 195 DDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPAPAVLDKWVCAQPSSQKATN 251
+ + E VS GH+ T S P + + A+PS++ T+
Sbjct: 384 -GQPPEHHEVTVSP-------PGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTS 432
>gi|239740953 PREDICTED: similar to c114 SLIT-like testicular
protein isoform 2 [Homo sapiens]
Length = 1700
Score = 37.0 bits (84), Expect = 0.049
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 135 PSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPIS 194
P ++ + +PS +Q+A I P + ++S P +P P++ + +P Q P
Sbjct: 326 PIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETP-- 383
Query: 195 DDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPAPAVLDKWVCAQPSSQKATN 251
+ + E VS GH+ T S P + + A+PS++ T+
Sbjct: 384 -GQPPEHHEVTVSP-------PGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTS 432
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 37.0 bits (84), Expect = 0.049
Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 144 PSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEE 203
P+K+ +D ++ E + ++P PP++ PP ++ Q +P + DG++
Sbjct: 242 PAKSPKDLAVKVHDKETPQDSLVAPAQPPSQTFPPPSLPSKSVAMQQKPTAYVRPMDGQD 301
Query: 204 TQVS-AADLEALISGHYPTSLEGDCEPSPAPAVLDKWVCAQPSSQKATNHNLHITEKL 260
S + +L+ L + + E PA A L K S ++ ++ +H E++
Sbjct: 302 QAPSESPELKPLPEDYRQQTFEKTDLKVPAKAKLTKLKMPSQSVEQTYSNEVHCVEEI 359
Score = 31.6 bits (70), Expect = 2.1
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 12/100 (12%)
Query: 145 SKAEQDASIPPGTHEALLQTALSPPPPPTRPVSP-----PQKAKEAPNTQAQPISDDEAS 199
S E D + QT PP P +P P + + + +++ SD ++S
Sbjct: 421 SMLEDDLQLSDSEDSDSEQTPEKPPSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDSS 480
Query: 200 DGEETQVSAADLEALISGHYPTSLEGDCEPSPAPAVLDKW 239
E++ S++D E P P P P +KW
Sbjct: 481 SDSESESSSSDSEENEPLETPA-------PEPEPPTTNKW 513
>gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]
Length = 1700
Score = 37.0 bits (84), Expect = 0.049
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 135 PSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPIS 194
P ++ + +PS +Q+A I P + ++S P +P P++ + +P Q P
Sbjct: 326 PIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETP-- 383
Query: 195 DDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPAPAVLDKWVCAQPSSQKATN 251
+ + E VS GH+ T S P + + A+PS++ T+
Sbjct: 384 -GQPPEHHEVTVSP-------PGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTS 432
>gi|110665701 leucine rich repeat containing 37A [Homo sapiens]
Length = 1700
Score = 37.0 bits (84), Expect = 0.049
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 135 PSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPIS 194
P ++ + +PS +Q+A I P + ++S P +P P++ + +P Q P
Sbjct: 326 PIQFPEEVEPSATQQEAPIEPPVPPMEHELSISEQQQPVQPSESPREVESSPTQQETP-- 383
Query: 195 DDEASDGEETQVSAADLEALISGHYPTSLEGDCEPSPAPAVLDKWVCAQPSSQKATN 251
+ + E VS GH+ T S P + + A+PS++ T+
Sbjct: 384 -GQPPEHHEVTVSP-------PGHHQTHHLASPSVSVKPPDVQLTIAAEPSAEVGTS 432
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 36.6 bits (83), Expect = 0.064
Identities = 52/195 (26%), Positives = 69/195 (35%), Gaps = 29/195 (14%)
Query: 135 PSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTR--------PVSPPQKA---- 182
PS + PS+ + PP T + + A PPPPP P P KA
Sbjct: 903 PSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKALLER 962
Query: 183 -KEAPNTQAQPISDDEASDGEETQVSAADL-----EALISGHYP--TSLEGDCEPSPAPA 234
+ P+ A +T S L L+SG P T P+PAP
Sbjct: 963 FHQVPSGIILQNKAGGAPAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPM 1022
Query: 235 VLDKWVCAQPSSQKATNHNLHITEKLEVLAKAYSVQGDKWRALGYAKAINALKSFHKPVT 294
P+ KA NL +AKA S K L Y ++ LK KP T
Sbjct: 1023 AATGLPPLLPAENKAFASNLPTLN----VAKAASSGPGKPSGLQYESKLSGLK---KPPT 1075
Query: 295 --SYQEACSIPGIGK 307
+EAC + + K
Sbjct: 1076 LQPSKEACFLEHLHK 1090
Score = 33.5 bits (75), Expect = 0.54
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 154 PPGTHEALLQTALSPPPPPTRPVSPPQKA--KEAPNTQAQPISDDEASDGEETQVSAADL 211
PP ++ A TA PP PP RP S P + AP+ S AS E + A
Sbjct: 845 PPASNPA--PTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPT 902
Query: 212 EALISGHYPTSLEGDCEPSPAPAV 235
+ +P S P+P P +
Sbjct: 903 PSDFQLQFPPSQGPHKSPTPPPTL 926
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 36.6 bits (83), Expect = 0.064
Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 11/87 (12%)
Query: 153 IPPGTHEALLQTALS---PPPPPTRPVSPPQKAKEAPNTQAQPISDDEASDGEETQVSAA 209
+PPG + +S PPPPP PV PP P P + S +E+ +S
Sbjct: 166 LPPGHPSSAASAPVSCSGPPPPPPPPVPPPPTGATPPPPPPLPAGGAQGSSHDESSMSG- 224
Query: 210 DLEALISG------HYPTSLEGDCEPS 230
L A I+G P G PS
Sbjct: 225 -LAAAIAGAKLRRVQRPEDASGGSSPS 250
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 36.2 bits (82), Expect = 0.084
Identities = 34/130 (26%), Positives = 52/130 (40%), Gaps = 15/130 (11%)
Query: 120 QERRLVDVAGFSIFIPSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRP--VS 177
Q + V G S P P+P E+ S P E +TA+ PP P +P +
Sbjct: 1679 QAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPP--EQTPETAMPEPPAPEKPSLLR 1736
Query: 178 PPQKAKEAPNTQ--AQPISDDEASDGEETQVSAADLEALISGHYPTSLEGDCEPS----- 230
P +K KE +P+ + A+ G +T+ +L +G TS P+
Sbjct: 1737 PVEKEKEKEKVTRGERPLRGERATSGRQTRPE----RSLATGQPATSRLPKARPTKVKAE 1792
Query: 231 PAPAVLDKWV 240
P P KW+
Sbjct: 1793 PPPKKRKKWL 1802
Score = 31.2 bits (69), Expect = 2.7
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 9/69 (13%)
Query: 142 PQPSKAEQDASIPPGTHEAL-------LQTALSPPPPPTRPVSPPQKAKEAPNTQAQPIS 194
P P+ Q PP AL T SPPPPP P PP A +P P +
Sbjct: 1463 PAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPP--PPPPAMPSPPPPPPPAA 1520
Query: 195 DDEASDGEE 203
A+ EE
Sbjct: 1521 APLAAPPEE 1529
Score = 30.0 bits (66), Expect = 6.0
Identities = 19/59 (32%), Positives = 23/59 (38%), Gaps = 7/59 (11%)
Query: 135 PSRYLDHPQPSKAEQDASIPPGTHEALLQTALSPPPPPTRPVSPPQKAKEAPNTQAQPI 193
P++ + P AE I G H+A PPPP P PP A E PI
Sbjct: 1012 PNKPPELPSTVNAEPLGLIQSGPHQAA-------PPPPPPPPPPPAPASEPKGGLTSPI 1063
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,208,993
Number of Sequences: 37866
Number of extensions: 1271747
Number of successful extensions: 10874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 9194
Number of HSP's gapped (non-prelim): 1589
length of query: 575
length of database: 18,247,518
effective HSP length: 108
effective length of query: 467
effective length of database: 14,157,990
effective search space: 6611781330
effective search space used: 6611781330
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.