Guide to the Human Genome
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Name: POLM Sequence: fasta or formatted (494aa) NCBI GI: 7019493
Description:

DNA-directed DNA polymerase mu

Referenced in:

DNA Polymerases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         43           3
 C cysteine            2.2         11           2
 D aspartate           3.2         16           2
 E glutamate           7.5         37           2
 F phenylalanine       4.3         21           2
 G glycine             7.9         39           2
 H histidine           3.4         17           2
 I isoleucine          1.6          8           1
 K lysine              3.0         15           1
 L leucine            11.1         55           2
 M methionine          1.6          8           1
 N asparagine          0.6          3           1
 P proline             7.5         37           2
 Q glutamine           6.5         32           3
 R arginine            8.9         44           3
 S serine              7.1         35           2
 T threonine           5.5         27           2
 V valine              6.7         33           2
 W tryptophan          1.4          7           1
 Y tyrosine            1.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA-directed DNA polymerase mu 
DNTT                  0.359   terminal deoxynucleotidyltransferase isoform 1 [Homo...
DNTT                  0.355   terminal deoxynucleotidyltransferase isoform 2 [Homo...
POLL                  0.155   DNA-directed DNA polymerase lambda 
POLB                  0.087   DNA-directed DNA polymerase beta 
CDC25C                0.011   cell division cycle 25C isoform b 
CDC25C                0.009   cell division cycle 25C isoform a 
CEP164                0.009   centrosomal protein 164kDa 
LOC100134060          0.008   PREDICTED: hypothetical protein 
FHDC1                 0.008   FH2 domain containing 1 
FLJ22184              0.007   PREDICTED: hypothetical protein FLJ22184 
GDF6                  0.006   growth differentiation factor 6 precursor 
SIGLEC1               0.006   sialoadhesin precursor 
LOC100291737          0.005   PREDICTED: hypothetical protein XP_002345024 
LOC100290757          0.005   PREDICTED: hypothetical protein XP_002347750 
LOC100289291          0.005   PREDICTED: hypothetical protein XP_002343521 
LMO7                  0.005   LIM domain only 7 isoform 2 
PRMT1                 0.005   HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo...
PRMT1                 0.005   HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo...
PRMT1                 0.005   HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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