Guide to the Human Genome
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Name: DNTT Sequence: fasta or formatted (508aa) NCBI GI: 63054852
Description:

terminal deoxynucleotidyltransferase isoform 2

Referenced in:

DNA Polymerases

Other entries for this name:
alt prot [509aa] terminal deoxynucleotidyltransferase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         31           2
 C cysteine            1.8          9           1
 D aspartate           5.9         30           1
 E glutamate           8.1         41           3
 F phenylalanine       5.5         28           1
 G glycine             4.9         25           2
 H histidine           1.6          8           1
 I isoleucine          4.5         23           2
 K lysine              7.7         39           2
 L leucine             9.8         50           3
 M methionine          2.6         13           1
 N asparagine          2.6         13           2
 P proline             3.9         20           2
 Q glutamine           3.9         20           1
 R arginine            7.5         38           2
 S serine              7.5         38           2
 T threonine           5.3         27           2
 V valine              6.9         35           2
 W tryptophan          1.8          9           1
 Y tyrosine            2.2         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   terminal deoxynucleotidyltransferase isoform 2 [Homo... 
DNTT                  0.995   terminal deoxynucleotidyltransferase isoform 1 [Homo...
POLM                  0.350   DNA-directed DNA polymerase mu 
POLL                  0.096   DNA-directed DNA polymerase lambda 
POLB                  0.066   DNA-directed DNA polymerase beta 
PPME1                 0.006   protein phosphatase methylesterase 1 
TMEM169               0.006   transmembrane protein 169 
TMEM169               0.006   transmembrane protein 169 
TMEM169               0.006   transmembrane protein 169 
TMEM169               0.006   transmembrane protein 169 
LOC646851             0.005   PREDICTED: hypothetical protein 
LOC646851             0.005   PREDICTED: hypothetical protein 
LOC646851             0.005   PREDICTED: hypothetical protein 
C10orf134             0.005   PREDICTED: chromosome 10 open reading frame 134 [Ho...
C10orf134             0.005   PREDICTED: chromosome 10 open reading frame 134 [Ho...
C10orf134             0.005   PREDICTED: chromosome 10 open reading frame 134 [Ho...
MORC4                 0.005   zinc finger, CW type with coiled-coil domain 2 isof...
MORC4                 0.005   zinc finger, CW type with coiled-coil domain 2 isof...
LOC283116             0.004   PREDICTED: similar to ring finger protein 18 isofor...
LOC283116             0.004   PREDICTED: similar to ring finger protein 18 isofor...
LOC283116             0.004   PREDICTED: similar to ring finger protein 18 
LOC283116             0.004   PREDICTED: similar to ring finger protein 18 
CEP164                0.004   centrosomal protein 164kDa 
RNF168                0.004   ring finger protein 168 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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