Guide to the Human Genome
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Name: ABCF2 Sequence: fasta or formatted (634aa) NCBI GI: 10947137
Description:

ATP-binding cassette, sub-family F, member 2 isoform b

Referenced in:

ATP-binding Cassette Proteins
Mitochondria

Other entries for this name:
alt prot [623aa] ATP-binding cassette, sub-family F, member 2 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         42           3
 C cysteine            1.7         11           1
 D aspartate           5.4         34           1
 E glutamate           8.8         56           3
 F phenylalanine       2.7         17           1
 G glycine             5.7         36           2
 H histidine           3.9         25           1
 I isoleucine          5.0         32           2
 K lysine              8.5         54           3
 L leucine            12.0         76           3
 M methionine          3.8         24           2
 N asparagine          3.6         23           2
 P proline             4.6         29           3
 Q glutamine           3.9         25           2
 R arginine            5.5         35           2
 S serine              4.3         27           1
 T threonine           5.4         34           2
 V valine              4.9         31           2
 W tryptophan          1.1          7           1
 Y tyrosine            2.5         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ATP-binding cassette, sub-family F, member 2 isoform... 
ABCF2                 0.983   ATP-binding cassette, sub-family F, member 2 isoform...
ABCF3                 0.314   ATP-binding cassette, sub-family F (GCN20), member ...
ABCF1                 0.307   ATP-binding cassette, sub-family F, member 1 isoform...
ABCF1                 0.305   ATP-binding cassette, sub-family F, member 1 isoform...
TAP2                  0.027   transporter 2, ATP-binding cassette, sub-family B is...
ABCG1                 0.027   ATP-binding cassette sub-family G member 1 isoform 7...
ABCG1                 0.027   ATP-binding cassette sub-family G member 1 isoform 6...
ABCG1                 0.027   ATP-binding cassette sub-family G member 1 isoform 5...
ABCG1                 0.027   ATP-binding cassette sub-family G member 1 isoform 3...
ABCG1                 0.027   ATP-binding cassette sub-family G member 1 isoform 4...
ABCG1                 0.027   ATP-binding cassette sub-family G member 1 isoform 2...
ABCB11                0.027   ATP-binding cassette, sub-family B (MDR/TAP), member...
ABCA2                 0.026   ATP-binding cassette, sub-family A, member 2 isoform...
ABCA2                 0.026   ATP-binding cassette, sub-family A, member 2 isoform...
ABCA12                0.025   ATP-binding cassette, sub-family A, member 12 isofor...
ABCA12                0.025   ATP-binding cassette, sub-family A, member 12 isofor...
ABCA10                0.025   ATP-binding cassette, sub-family A, member 10 [Homo...
ABCC4                 0.025   ATP-binding cassette, sub-family C, member 4 isofor...
ABCA5                 0.025   ATP-binding cassette, sub-family A , member 5 
ABCA5                 0.025   ATP-binding cassette, sub-family A , member 5 
ABCA6                 0.025   ATP-binding cassette, sub-family A, member 6 
ABCA9                 0.024   ATP-binding cassette, sub-family A, member 9 
ABCC4                 0.024   ATP-binding cassette, sub-family C, member 4 isofor...
LOC100292715          0.022   PREDICTED: hypothetical protein 
CFTR                  0.022   cystic fibrosis transmembrane conductance regulator ...
TAP1                  0.022   transporter 1, ATP-binding cassette, sub-family B [Ho...
ABCC3                 0.021   ATP-binding cassette, sub-family C, member 3 isoform ...
ABCC1                 0.021   ATP-binding cassette, sub-family C, member 1 isofor...
ABCC1                 0.021   ATP-binding cassette, sub-family C, member 1 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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