Guide to the Human Genome
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Name: NUDT12 Sequence: fasta or formatted (462aa) NCBI GI: 13899267
Description:

nudix-type motif 12

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         34           2
 C cysteine            2.8         13           1
 D aspartate           3.9         18           1
 E glutamate           8.7         40           3
 F phenylalanine       4.1         19           2
 G glycine             6.1         28           2
 H histidine           2.8         13           1
 I isoleucine          5.6         26           1
 K lysine              7.1         33           2
 L leucine            10.4         48           2
 M methionine          1.5          7           1
 N asparagine          4.3         20           2
 P proline             5.6         26           2
 Q glutamine           4.1         19           2
 R arginine            4.5         21           2
 S serine              5.4         25           2
 T threonine           4.5         21           1
 V valine              6.7         31           2
 W tryptophan          1.9          9           1
 Y tyrosine            2.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nudix-type motif 12 
NUDT13                0.150   nudix-type motif 13 
RFXANK                0.037   regulatory factor X-associated ankyrin-containing pro...
ANKRA2                0.037   ankyrin repeat, family A (RFXANK-like), 2 
TANC1                 0.031   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.031   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKS1B                0.031   cajalin 2 isoform a 
RFXANK                0.028   regulatory factor X-associated ankyrin-containing pr...
FANK1                 0.027   fibronectin type III and ankyrin repeat domains 1 [...
ANK3                  0.027   ankyrin 3 isoform 1 
ANKS1A                0.027   ankyrin repeat and sterile alpha motif domain conta...
ANKHD1                0.027   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.027   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.027   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.027   ANKHD1-EIF4EBP3 protein 
MIB2                  0.027   mindbomb homolog 2 
ANKRD26               0.027   ankyrin repeat domain 26 
ANKRD42               0.027   ankyrin repeat domain 42 
ANKRD55               0.027   ankyrin repeat domain 55 isoform 1 
EHMT2                 0.026   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.026   euchromatic histone-lysine N-methyltransferase 2 is...
ANKRD52               0.026   ankyrin repeat domain 52 
ANKRD17               0.026   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.026   ankyrin repeat domain protein 17 isoform b 
EHMT1                 0.026   euchromatic histone-lysine N-methyltransferase 1 is...
ANKRD39               0.026   ankyrin repeat domain 39 
KRIT1                 0.025   krev interaction trapped 1 isoform 1 
KRIT1                 0.025   krev interaction trapped 1 isoform 1 
KRIT1                 0.025   krev interaction trapped 1 isoform 1 
KRIT1                 0.025   krev interaction trapped 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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