| Name: COG3 | Sequence: fasta or formatted (828aa) | NCBI GI: 13899251 | |
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Description: component of golgi transport complex 3
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Referenced in: ER, Golgi, and the Secretory Pathway
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 6.9 57 3 C cysteine 2.1 17 1 D aspartate 5.2 43 2 E glutamate 8.1 67 3 F phenylalanine 4.2 35 2 G glycine 2.7 22 2 H histidine 2.3 19 1 I isoleucine 5.3 44 2 K lysine 6.6 55 2 L leucine 13.9 115 4 M methionine 1.9 16 2 N asparagine 3.6 30 2 P proline 4.6 38 1 Q glutamine 6.9 57 3 R arginine 3.7 31 2 S serine 7.6 63 2 T threonine 6.4 53 2 V valine 4.7 39 2 W tryptophan 0.5 4 1 Y tyrosine 2.8 23 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 component of golgi transport complex 3 EEA1 0.011 early endosome antigen 1, 162kD TRIO 0.009 triple functional domain (PTPRF interacting) HOOK1 0.007 hook homolog 1 CENPE 0.006 centromere protein E GOLGB1 0.006 golgi autoantigen, golgin subfamily b, macrogolgin ... UBE3C 0.006 ubiquitin protein ligase E3C CDC42BPB 0.006 CDC42-binding protein kinase beta GCN1L1 0.006 GCN1 general control of amino-acid synthesis 1-like ... RUFY1 0.005 RUN and FYVE domain-containing 1 isoform b RUFY1 0.005 RUN and FYVE domain-containing 1 isoform b RUFY1 0.005 RUN and FYVE domain-containing 1 isoform a PPFIA3 0.005 PTPRF interacting protein alpha 3 DSP 0.005 desmoplakin isoform I OFD1 0.005 oral-facial-digital syndrome 1 KALRN 0.005 kalirin, RhoGEF kinase isoform 1 KALRN 0.005 kalirin, RhoGEF kinase isoform 2 PKD2 0.005 polycystin 2 LOC100133758 0.004 PREDICTED: hypothetical protein, partial MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.004 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... SPTB 0.004 spectrin beta isoform a SPTB 0.004 spectrin beta isoform b RPUSD2 0.004 RNA pseudouridylate synthase domain containing 2 [Ho... FAM184A 0.004 hypothetical protein LOC79632 isoform 2 FAM184A 0.004 hypothetical protein LOC79632 isoform 1 FOXP4 0.004 forkhead box P4 isoform 1 MCF2L 0.004 MCF.2 cell line derived transforming sequence-like ...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
