Guide to the Human Genome
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Name: ZNF235 Sequence: fasta or formatted (738aa) NCBI GI: 190610025
Description:

zinc finger protein 93 homolog

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         26           1
 C cysteine            6.0         44           2
 D aspartate           3.4         25           2
 E glutamate           6.6         49           3
 F phenylalanine       4.5         33           1
 G glycine             7.5         55           2
 H histidine           7.9         58           3
 I isoleucine          3.1         23           2
 K lysine              8.8         65           2
 L leucine             5.1         38           2
 M methionine          0.9          7           1
 N asparagine          3.8         28           1
 P proline             3.3         24           1
 Q glutamine           7.3         54           2
 R arginine            4.9         36           1
 S serine             10.0         74           3
 T threonine           5.1         38           1
 V valine              4.6         34           1
 W tryptophan          0.8          6           1
 Y tyrosine            2.8         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 93 homolog 
ZNF226                0.532   zinc finger protein 226 isoform a 
ZNF226                0.532   zinc finger protein 226 isoform a 
ZNF227                0.507   zinc finger protein 227 
ZFP112                0.470   zinc finger protein 228 isoform 1 
ZFP112                0.462   zinc finger protein 228 isoform 2 
ZNF234                0.450   zinc finger protein 234 
ZNF234                0.450   zinc finger protein 234 
ZNF224                0.440   zinc finger protein 224 
ZNF233                0.427   zinc finger protein 233 
ZNF225                0.414   zinc finger protein 225 
ZNF347                0.411   zinc finger protein 347 
ZNF229                0.409   zinc finger protein 229 
ZNF616                0.401   zinc finger protein 616 
ZNF208                0.397   zinc finger protein 208 
ZNF45                 0.395   zinc finger protein 45 
LOC100287429          0.392   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.392   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.392   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.392   zinc finger protein 84 
ZNF84                 0.392   zinc finger protein 84 
ZNF761                0.390   zinc finger protein 761 
ZNF569                0.389   zinc finger protein 569 
ZNF484                0.388   zinc finger protein 484 isoform a 
ZNF665                0.388   zinc finger protein 665 
ZNF420                0.388   zinc finger protein 420 
ZNF184                0.387   zinc finger protein 184 
ZNF43                 0.386   zinc finger protein 43 
ZNF160                0.385   zinc finger protein 160 
ZNF160                0.385   zinc finger protein 160 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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