Guide to the Human Genome
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Name: ZNF28 Sequence: fasta or formatted (665aa) NCBI GI: 57165428
Description:

zinc finger protein 28

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         25           2
 C cysteine            6.6         44           2
 D aspartate           2.6         17           1
 E glutamate           8.0         53           2
 F phenylalanine       4.4         29           2
 G glycine             5.6         37           2
 H histidine           9.0         60           2
 I isoleucine          3.8         25           2
 K lysine             12.2         81           2
 L leucine             5.6         37           2
 M methionine          1.2          8           2
 N asparagine          4.2         28           2
 P proline             3.2         21           1
 Q glutamine           4.4         29           2
 R arginine            5.7         38           2
 S serine              6.9         46           2
 T threonine           5.9         39           1
 V valine              3.3         22           1
 W tryptophan          0.2          1           1
 Y tyrosine            3.8         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 28 
ZNF808                0.670   zinc finger protein 808 
ZNF845                0.663   zinc finger protein 845 
ZNF761                0.654   zinc finger protein 761 
ZNF600                0.633   zinc finger protein 600 
LOC388559             0.630   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.630   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.630   PREDICTED: hypothetical protein LOC388559 
ZNF611                0.574   zinc finger protein 611 isoform b 
ZNF611                0.574   zinc finger protein 611 isoform a 
ZNF611                0.574   zinc finger protein 611 isoform a 
ZNF611                0.574   zinc finger protein 611 isoform a 
ZNF468                0.553   zinc finger protein ZNF468 isoform 1 
ZNF468                0.553   zinc finger protein ZNF468 isoform 2 
ZNF813                0.549   zinc finger protein 813 
ZNF160                0.537   zinc finger protein 160 
ZNF160                0.537   zinc finger protein 160 
ZNF160                0.537   zinc finger protein 160 
ZNF347                0.535   zinc finger protein 347 
ZNF860                0.524   zinc finger protein 860 
ZNF816A               0.518   zinc finger protein 816A 
ZNF616                0.511   zinc finger protein 616 
ZNF665                0.500   zinc finger protein 665 
ZNF836                0.499   zinc finger protein 836 
ZNF841                0.493   zinc finger protein 841 
ZNF578                0.477   zinc finger protein 578 
ZNF91                 0.458   zinc finger protein 91 
ZNF208                0.453   zinc finger protein 208 
ZNF420                0.449   zinc finger protein 420 
ZNF534                0.446   zinc finger protein 534 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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