Guide to the Human Genome
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Name: ZNF468 Sequence: fasta or formatted (469aa) NCBI GI: 57165430
Description:

zinc finger protein ZNF468 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [522aa] zinc finger protein ZNF468 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.0         14           2
 C cysteine            6.2         29           2
 D aspartate           2.1         10           1
 E glutamate           9.0         42           2
 F phenylalanine       4.3         20           1
 G glycine             6.4         30           1
 H histidine           9.2         43           2
 I isoleucine          4.5         21           2
 K lysine             11.1         52           2
 L leucine             6.2         29           2
 M methionine          0.9          4           1
 N asparagine          4.1         19           2
 P proline             3.0         14           1
 Q glutamine           4.1         19           1
 R arginine            6.0         28           2
 S serine              8.3         39           2
 T threonine           5.5         26           1
 V valine              3.0         14           1
 W tryptophan          0.4          2           1
 Y tyrosine            3.0         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein ZNF468 isoform 1 
ZNF468                1.000   zinc finger protein ZNF468 isoform 2 
ZNF28                 0.800   zinc finger protein 28 
LOC388559             0.732   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.732   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.732   PREDICTED: hypothetical protein LOC388559 
ZNF845                0.707   zinc finger protein 845 
ZNF813                0.704   zinc finger protein 813 
ZNF808                0.682   zinc finger protein 808 
ZNF578                0.680   zinc finger protein 578 
ZNF860                0.673   zinc finger protein 860 
ZNF600                0.671   zinc finger protein 600 
ZNF761                0.666   zinc finger protein 761 
ZNF611                0.660   zinc finger protein 611 isoform b 
ZNF611                0.660   zinc finger protein 611 isoform a 
ZNF611                0.660   zinc finger protein 611 isoform a 
ZNF611                0.660   zinc finger protein 611 isoform a 
ZNF765                0.645   zinc finger protein 765 
ZNF816A               0.614   zinc finger protein 816A 
ZNF701                0.579   zinc finger protein 701 
ZNF415                0.524   zinc finger protein 415 isoform 1 
ZNF415                0.524   zinc finger protein 415 isoform 2 
ZNF160                0.494   zinc finger protein 160 
ZNF160                0.494   zinc finger protein 160 
ZNF160                0.494   zinc finger protein 160 
ZNF665                0.488   zinc finger protein 665 
ZNF347                0.482   zinc finger protein 347 
ZNF836                0.481   zinc finger protein 836 
ZNF320                0.477   zinc finger protein 320 
ZNF83                 0.464   zinc finger protein 83 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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