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Search of human proteins with 68989263
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme
A dehydrogenase [Homo sapiens]
(723 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 1446 0.0
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 284 2e-76
gi|94557308 L-3-hydroxyacyl-Coenzyme A dehydrogenase precursor [... 131 3e-30
gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 115 1e-25
gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 94 3e-19
gi|115430219 lambda-crystallin [Homo sapiens] 73 1e-12
gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 72 1e-12
gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isof... 70 7e-12
gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isof... 70 7e-12
gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [... 70 9e-12
gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [... 70 9e-12
gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo... 68 3e-11
gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isof... 64 4e-10
gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Hom... 63 1e-09
gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Hom... 61 4e-09
gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 59 2e-08
gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 59 2e-08
gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 59 2e-08
gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 57 5e-08
gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 57 5e-08
gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 57 5e-08
gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 57 5e-08
gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 56 1e-07
gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 56 1e-07
gi|71743840 class IV alcohol dehydrogenase, mu or sigma subunit ... 33 0.71
gi|156523966 class V alcohol dehydrogenase isoform 1 [Homo sapiens] 32 1.6
gi|4501939 class V alcohol dehydrogenase isoform 2 [Homo sapiens] 32 1.6
gi|71565154 class III alcohol dehydrogenase, chi subunit [Homo s... 31 4.6
gi|239757068 PREDICTED: hypothetical protein [Homo sapiens] 31 4.6
gi|239751578 PREDICTED: hypothetical protein [Homo sapiens] 31 4.6
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 1446 bits (3744), Expect = 0.0
Identities = 723/723 (100%), Positives = 723/723 (100%)
Query: 1 MAEYTRLHNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAG 60
MAEYTRLHNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAG
Sbjct: 1 MAEYTRLHNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAG 60
Query: 61 ADIRGFSAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
ADIRGFSAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV
Sbjct: 61 ADIRGFSAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 181 AIRFAQRVSDQPLESRRLCNKPIQSLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAA 240
AIRFAQRVSDQPLESRRLCNKPIQSLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAA
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKPIQSLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAA 240
Query: 241 VQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWKTASARPVSSV 300
VQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWKTASARPVSSV
Sbjct: 241 VQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWKTASARPVSSV 300
Query: 301 GVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSG 360
GVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSG
Sbjct: 301 GVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSG 360
Query: 361 PKPRLTSSVKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIAS 420
PKPRLTSSVKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIAS
Sbjct: 361 PKPRLTSSVKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIAS 420
Query: 421 STDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFV 480
STDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFV
Sbjct: 421 STDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFV 480
Query: 481 GNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLT 540
GNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLT
Sbjct: 481 GNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLDVGWKSRKGQGLT 540
Query: 541 GPTLLPGTPARKRGNRRYCPIPDVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFL 600
GPTLLPGTPARKRGNRRYCPIPDVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFL
Sbjct: 541 GPTLLPGTPARKRGNRRYCPIPDVLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFL 600
Query: 601 SRYRKTHHIEPRTISQDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHK 660
SRYRKTHHIEPRTISQDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHK
Sbjct: 601 SRYRKTHHIEPRTISQDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHK 660
Query: 661 GGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLASQGNPPLKEWQSLAGSPS 720
GGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLASQGNPPLKEWQSLAGSPS
Sbjct: 661 GGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLASQGNPPLKEWQSLAGSPS 720
Query: 721 SKL 723
SKL
Sbjct: 721 SKL 723
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 284 bits (727), Expect = 2e-76
Identities = 217/714 (30%), Positives = 356/714 (49%), Gaps = 68/714 (9%)
Query: 11 LALIRLRNP--PVNAISTTLLRDIKEGLQKAVIDHTIK-AIVICGAEGKFSAGADIRGFS 67
+A++R+ +P VN +S L + E + + I+ A++I G F AGADI +
Sbjct: 49 VAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLA 108
Query: 68 APRTF------GLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQ-- 119
A +T +V++++++ KP+VAAI G GGGLE+A+ C YRIA + +
Sbjct: 109 ACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTV 168
Query: 120 VGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNS---- 175
+G PEV LG LPGA GTQ LP++ GVPAALD++ +GR I AD A K+G++D++V
Sbjct: 169 LGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPG 228
Query: 176 -DPVEE---------AIRFAQRVSDQPLESRR---LCNKPI---QSLPNM-DSIFSEALL 218
P EE AI FA+ ++D+ + +R L K ++P + ++ +
Sbjct: 229 LKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIPFVRQQVYKKVEE 288
Query: 219 KMRRQHPGCL-AQEACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAER- 276
K+R+Q G A + V+ ++ + G E + F L+ + +++AL + +
Sbjct: 289 KVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKESKALMGLYHGQVL 348
Query: 277 -KANKWSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLAT 335
K NK+ P + V + ++G G MG GI + I D+ L
Sbjct: 349 CKKNKFGAPQ---------KDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDR 399
Query: 336 ANKMITSVLEKEASKMQQSGHPWSGPKPRLTSSVKELG--GVDLVIEAVFEEMSLKKQVF 393
+ + L + K + LT + G D+VIEAVFE++SLK +V
Sbjct: 400 GQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDLSLKHRVL 459
Query: 394 AELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSP 453
E+ AV +NTSAL + EIA+ + RP VIG H+FSP M+LLE+I ++ +S
Sbjct: 460 KEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSK 519
Query: 454 TTIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFG 513
T A+ + + K K+ +VV + GF R L P ++ +L+EG P+++D + FG
Sbjct: 520 DTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFG 579
Query: 514 FKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRYCPIPDVLCEL---GR 570
F +G + D G+DV + G G GN P++L ++ G
Sbjct: 580 FPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGG------GN------PELLTQMVSKGF 627
Query: 571 FGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKTHHIEPRT-ISQDEILE-RCLYSLI 628
G+K+GKG+Y Y + + R L+ + + + P++ +S DE ++ R + +
Sbjct: 628 LGRKSGKGFYIYQEGVKRKD-----LNSDMDSILASLKLPPKSEVSSDEDIQFRLVTRFV 682
Query: 629 NEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKY 682
NEA L EGI A+P D+ + G G+P GGP + G ++++L+KY
Sbjct: 683 NEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKY 736
>gi|94557308 L-3-hydroxyacyl-Coenzyme A dehydrogenase precursor
[Homo sapiens]
Length = 314
Score = 131 bits (329), Expect = 3e-30
Identities = 98/312 (31%), Positives = 149/312 (47%), Gaps = 25/312 (8%)
Query: 285 SGASWKTASARP--VSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITS 342
S +S +ASA+ V V V+G G MG GI A V+ VD ++ LA + K I
Sbjct: 13 SSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE 72
Query: 343 VLEKEASKM--------QQSGHPWSGPKPRLTSSVKELGGVDLVIEAVFEEMSLKKQVFA 394
L K A K + T + + DLV+EA+ E + +K ++F
Sbjct: 73 SLRKVAKKKFAENLKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFK 132
Query: 395 ELSAVCKPEAFLCTNTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPT 454
L +NTS+L + IA++T R G HFF+P VMKL+EVI + +S
Sbjct: 133 RLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQK 192
Query: 455 TIATVMNLSKKIKKIGVVVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLE-EF 512
T ++++ SK + K V + GF+ NR+L PY +A L E G + E++D ++
Sbjct: 193 TFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGA 252
Query: 513 GFKMGPFRVSDLAGLDVGWKSRKGQGLTGPTLLPGTPARKRGNRRYCPIPDV--LCELGR 570
G+ MGPF + D GLD T ++ G N + P P + L +
Sbjct: 253 GYPMGPFELLDYVGLD-----------TTKFIVDGWHEMDAENPLHQPSPSLNKLVAENK 301
Query: 571 FGQKTGKGWYQY 582
FG+KTG+G+Y+Y
Sbjct: 302 FGKKTGEGFYKY 313
Score = 35.4 bits (80), Expect = 0.19
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 619 ILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEK 678
I+ R L + EA R+ G AS E ID G G+P GP VGL T
Sbjct: 218 IVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPM---GPFELLDYVGLDTTKFI 273
Query: 679 LQKYYRQNPDIPQLEPSDYLKKLASQ 704
+ ++ + + P +PS L KL ++
Sbjct: 274 VDGWHEMDAENPLHQPSPSLNKLVAE 299
>gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1
precursor [Homo sapiens]
Length = 290
Score = 115 bits (288), Expect = 1e-25
Identities = 84/284 (29%), Positives = 139/284 (48%), Gaps = 39/284 (13%)
Query: 1 MAEYTRLHNALALIRLRNPP-VNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSA 59
+AE +N + LI+L P +NA+ L+ ++ + L+ D + AIV+ G + F+A
Sbjct: 37 IAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLTGGDKAFAA 96
Query: 60 GADIR---GFSAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHA 116
GADI+ S + D + + +KPV+AA+ G AFGGG ELA+ C A
Sbjct: 97 GADIKEMQNLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGE 156
Query: 117 EAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 176
+AQ PE+ +G +PGA GTQ L R G A++++ +G RI A +A + G++ K+ +
Sbjct: 157 KAQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVE 216
Query: 177 P-VEEAIRFAQRVSDQPLESRRLCNKPIQSLPNMDSIFSEALLKMRRQHPGCLAQEACVR 235
VEEAI+ A++++ S+ ++ M ++
Sbjct: 217 TLVEEAIQCAEKIASN----------------------SKIVVAMAKE------------ 242
Query: 236 AVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKAN 279
+V AA + G K E++LF + + AF +RKAN
Sbjct: 243 SVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKRKAN 286
>gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase
precursor [Homo sapiens]
Length = 339
Score = 94.4 bits (233), Expect = 3e-19
Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 22 NAISTTLLRDIKEGLQKAVIDHTIKAIVICG-AEGKFSAGADIR-----GFSAPRTFGLT 75
N++S L++ + + + D ++ I+I G F AGAD++ S F
Sbjct: 101 NSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSSEVGPFVSK 160
Query: 76 LGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARG 135
+ V+++I P +AAI G+A GGGLELAL C R+A + A++GL E L ++PG G
Sbjct: 161 IRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGG 220
Query: 136 TQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEEA 181
TQ LPR G+ A +LI S R + EA +G++ V+ + +A
Sbjct: 221 TQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDA 266
>gi|115430219 lambda-crystallin [Homo sapiens]
Length = 319
Score = 72.8 bits (177), Expect = 1e-12
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 20/225 (8%)
Query: 300 VGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWS 359
V +VG G +GR + FA V D ++ Q+ A + I KE ++Q+G
Sbjct: 9 VVIVGSGVIGRSWAMLFASGGFQVKLYDIEQQQIRNALENI----RKEMKLLEQAGSLKG 64
Query: 360 GPK-----------PRLTSSVKELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
P + +V+ G + E V E++ LKK++FA+L ++ L +
Sbjct: 65 SLSVEEQLSLISGCPNIQEAVE---GAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSS 121
Query: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
+TS L ++ + I H +P + + L+E++P ++PTT+ L KKI +
Sbjct: 122 STSCLMPSKLFAGLVHVKQCIVAHPVNPPYYIPLVELVPHPETAPTTVDRTHALMKKIGQ 181
Query: 469 IGV-VVGNCFGFVGNRMLNPYYNQAYFLLEEG-SKPEEVDQVLEE 511
+ V GFV NR+ ++A+ L+EEG P ++D V+ E
Sbjct: 182 CPMRVQKEVAGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSE 226
>gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein
[Homo sapiens]
Length = 328
Score = 72.4 bits (176), Expect = 1e-12
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 22 NAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFSAP------------ 69
NA++ R++ E K D +A+VI GA F+AG D+ ++
Sbjct: 79 NAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARI 138
Query: 70 ----RTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEV 125
R + I+R KPV+AA+ G GGG++L C R +A + EV
Sbjct: 139 SWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEV 198
Query: 126 TLGLLPGARGTQLLPRLTGVPAAL-DLITSGRRILADEALKLGILDKVVNSDPV--EEAI 182
+GL Q LP++ G + + +L + R+++ADEAL G++ +V V + A+
Sbjct: 199 DVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAAL 258
Query: 183 RFAQRVSDQPLESRRLCNKPIQSLPNMDSIFSEALLKMRRQHPGCLAQEACVRAVQAAVQ 242
A +S + + + + L + D +E+L + + L + V++VQA +
Sbjct: 259 ALAAEISSK--SPVAVQSTKVNLLYSRDHSVAESLNYVASWNMSMLQTQDLVKSVQATTE 316
>gi|157694516 enoyl Coenzyme A hydratase domain containing 1 isoform
1 [Homo sapiens]
Length = 301
Score = 70.1 bits (170), Expect = 7e-12
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 9 NALALIRLRNPP-VNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
N + ++ L NP +NA S ++ + E + + K +++ GA+ FS+G+D+
Sbjct: 56 NGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVK 115
Query: 68 APRT------FGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVG 121
+ T + + + + R VA +QG A GGG E C +R+ E+++
Sbjct: 116 SLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIR 175
Query: 122 LPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD----P 177
+G++P GT L + G AL +++ ++ + AL +G++++V+ S
Sbjct: 176 FVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKS 235
Query: 178 VEEAIRFAQRVSDQPLESRRLCNKPIQS 205
+EEA + ++ P E R K + S
Sbjct: 236 LEEAQEWLKQFIQGPPEVIRALKKSVCS 263
>gi|213417737 enoyl Coenzyme A hydratase domain containing 1 isoform
5 [Homo sapiens]
Length = 307
Score = 70.1 bits (170), Expect = 7e-12
Identities = 50/208 (24%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 9 NALALIRLRNPP-VNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
N + ++ L NP +NA S ++ + E + + K +++ GA+ FS+G+D+
Sbjct: 62 NGIGILTLNNPSRMNAFSGVMMLQLLEKVIELENWTEGKGLIVRGAKNTFSSGSDLNAVK 121
Query: 68 APRT------FGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVG 121
+ T + + + + R VA +QG A GGG E C +R+ E+++
Sbjct: 122 SLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWALGGGAEFTTACDFRLMTPESKIR 181
Query: 122 LPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD----P 177
+G++P GT L + G AL +++ ++ + AL +G++++V+ S
Sbjct: 182 FVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLDSKNALNIGMVEEVLQSSDETKS 241
Query: 178 VEEAIRFAQRVSDQPLESRRLCNKPIQS 205
+EEA + ++ P E R K + S
Sbjct: 242 LEEAQEWLKQFIQGPPEVIRALKKSVCS 269
>gi|37594469 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2
[Homo sapiens]
Length = 338
Score = 69.7 bits (169), Expect = 9e-12
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 13 LIRLRNPP-VNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGK-FSAGADIRGFSAPR 70
+I L P +NA++ ++R I L+K D I+I GA GK F AG DIR S
Sbjct: 48 VITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAE 107
Query: 71 TFGLTLGHVV--DEIQRN------EKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGL 122
+ V +E N +KP VA I G+ GGG+ L++ +R+A + +
Sbjct: 108 KAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAM 167
Query: 123 PEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 176
PE +GL P G LPRL G L +G R+ + + GI V+S+
Sbjct: 168 PETAIGLFPDVGGGYFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFVDSE 220
>gi|37594471 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1
[Homo sapiens]
Length = 386
Score = 69.7 bits (169), Expect = 9e-12
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 13 LIRLRNPP-VNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGK-FSAGADIRGFSAPR 70
+I L P +NA++ ++R I L+K D I+I GA GK F AG DIR S
Sbjct: 48 VITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAE 107
Query: 71 TFGLTLGHVV--DEIQRN------EKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGL 122
+ V +E N +KP VA I G+ GGG+ L++ +R+A + +
Sbjct: 108 KAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAM 167
Query: 123 PEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSD 176
PE +GL P G LPRL G L +G R+ + + GI V+S+
Sbjct: 168 PETAIGLFPDVGGGYFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFVDSE 220
>gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo
sapiens]
Length = 303
Score = 67.8 bits (164), Expect = 3e-11
Identities = 51/187 (27%), Positives = 90/187 (48%), Gaps = 15/187 (8%)
Query: 14 IRLRNPPV-NAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFSAPRTF 72
I L NP N +S +L+ ++ + + +K I+I FS+G D++ + +
Sbjct: 59 IVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGR 118
Query: 73 GL------TLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEVT 126
T V+ I+ + PV+A + G+A G +L C +A ++ P V
Sbjct: 119 DYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVN 178
Query: 127 LGLL---PGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVV-NSDPVEEAI 182
+GL PG + +PR AL+++ +G I A EAL G+L KVV ++ EE +
Sbjct: 179 VGLFCSTPGVALARAVPR----KVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETM 234
Query: 183 RFAQRVS 189
R A++++
Sbjct: 235 RIARKIA 241
>gi|157694520 enoyl Coenzyme A hydratase domain containing 1 isoform
3 [Homo sapiens]
Length = 226
Score = 64.3 bits (155), Expect = 4e-10
Identities = 42/170 (24%), Positives = 81/170 (47%), Gaps = 10/170 (5%)
Query: 46 KAIVICGAEGKFSAGADIRGFSAPRT------FGLTLGHVVDEIQRNEKPVVAAIQGMAF 99
K +++ GA+ FS+G+D+ + T + + + + R VA +QG A
Sbjct: 19 KGLIVRGAKNTFSSGSDLNAVKSLGTPEDGMAVCMFMQNTLTRFMRLPLISVALVQGWAL 78
Query: 100 GGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRIL 159
GGG E C +R+ E+++ +G++P GT L + G AL +++ ++
Sbjct: 79 GGGAEFTTACDFRLMTPESKIRFVHKEMGIIPSWGGTTRLVEIIGSRQALKVLSGALKLD 138
Query: 160 ADEALKLGILDKVVNSD----PVEEAIRFAQRVSDQPLESRRLCNKPIQS 205
+ AL +G++++V+ S +EEA + ++ P E R K + S
Sbjct: 139 SKNALNIGMVEEVLQSSDETKSLEEAQEWLKQFIQGPPEVIRALKKSVCS 188
>gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Homo
sapiens]
Length = 302
Score = 62.8 bits (151), Expect = 1e-09
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 8/177 (4%)
Query: 11 LALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICG-AEGKFSAGADIR---GF 66
+A+++ +NPPVN++S L ++ L+K D + + +++ G FSAG D+ G
Sbjct: 57 VAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGR 116
Query: 67 SAPRTFGL--TLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQ--VGL 122
S G + + + ++ +V+AI G GG +AL C YRI + +GL
Sbjct: 117 SPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGL 176
Query: 123 PEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVE 179
E LG++ L G AA + G EAL++GI+D+VV + V+
Sbjct: 177 NETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPEEQVQ 233
>gi|150378541 enoyl Coenzyme A hydratase domain containing 2 [Homo
sapiens]
Length = 261
Score = 60.8 bits (146), Expect = 4e-09
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 27/153 (17%)
Query: 22 NAISTTLLRDIKEGLQKAVIDHTIKAIVI-CGAEGKFSAGADIRGFSAPRTFGLTLGHVV 80
NA+ + ++ E L + D ++ ++ G +G F AGAD++
Sbjct: 54 NALGNVFVSELLETLAQLREDRQVRVLLFRSGVKGVFCAGADLK---------------- 97
Query: 81 DEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLP 140
+ Q +E V +Q + G IA + A +GL E T GLLPGA GTQ LP
Sbjct: 98 EREQMSEAEVGVFVQRLR---------GLMNDIA-SSAVMGLIETTRGLLPGAGGTQRLP 147
Query: 141 RLTGVPAALDLITSGRRILADEALKLGILDKVV 173
R GV A +LI +GRR+ EA LG+++ V
Sbjct: 148 RCLGVALAKELIFTGRRLSGTEAHVLGLVNHAV 180
>gi|221307494 chromodomain protein, Y chromosome-like isoform a
[Homo sapiens]
Length = 544
Score = 58.5 bits (140), Expect = 2e-08
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGAD----IRGFSA 68
L+ ++ N+++ ++R+++ L A D + K +++ F G D IR +
Sbjct: 302 LLSTKSSENNSLNPEVMREVQSALSTAAADDS-KLVLLSAVGSVFCCGLDFIYFIRRLTD 360
Query: 69 PRTFGLT-----LGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
R T + + V+ + +KP++ A+ G A G G + C A+ +A P
Sbjct: 361 DRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTP 420
Query: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVV--NSDPVEEA 181
T G P T + P++ G +A +++ SGR++ A EA G++ +V + E
Sbjct: 421 YTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVM 480
Query: 182 IRFAQRVSDQPL---ESRRL--CNKPIQ 204
+R + S P+ ES+ L CN ++
Sbjct: 481 VRIKELASCNPVVLEESKALVRCNMKME 508
>gi|221136756 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 58.5 bits (140), Expect = 2e-08
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGAD----IRGFSA 68
L+ ++ N+++ ++R+++ L A D + K +++ F G D IR +
Sbjct: 170 LLSTKSSENNSLNPEVMREVQSALSTAAADDS-KLVLLSAVGSVFCCGLDFIYFIRRLTD 228
Query: 69 PRTFGLT-----LGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
R T + + V+ + +KP++ A+ G A G G + C A+ +A P
Sbjct: 229 DRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTP 288
Query: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVV--NSDPVEEA 181
T G P T + P++ G +A +++ SGR++ A EA G++ +V + E
Sbjct: 289 YTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVM 348
Query: 182 IRFAQRVSDQPL---ESRRL--CNKPIQ 204
+R + S P+ ES+ L CN ++
Sbjct: 349 VRIKELASCNPVVLEESKALVRCNMKME 376
>gi|221136753 chromodomain protein, Y chromosome-like isoform d
[Homo sapiens]
Length = 412
Score = 58.5 bits (140), Expect = 2e-08
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGAD----IRGFSA 68
L+ ++ N+++ ++R+++ L A D + K +++ F G D IR +
Sbjct: 170 LLSTKSSENNSLNPEVMREVQSALSTAAADDS-KLVLLSAVGSVFCCGLDFIYFIRRLTD 228
Query: 69 PRTFGLT-----LGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
R T + + V+ + +KP++ A+ G A G G + C A+ +A P
Sbjct: 229 DRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTP 288
Query: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVV--NSDPVEEA 181
T G P T + P++ G +A +++ SGR++ A EA G++ +V + E
Sbjct: 289 YTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVM 348
Query: 182 IRFAQRVSDQPL---ESRRL--CNKPIQ 204
+R + S P+ ES+ L CN ++
Sbjct: 349 VRIKELASCNPVVLEESKALVRCNMKME 376
>gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b
[Homo sapiens]
Length = 554
Score = 57.4 bits (137), Expect = 5e-08
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGF------ 66
++ R+ NA++T ++++I L A D + K ++ A F G D F
Sbjct: 298 VLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRN 356
Query: 67 ---SAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
+A T+ + V+ + +KP+V ++ G A G G + C A+ +A P
Sbjct: 357 NRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 416
Query: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV 172
T G P + P++ G +A +++ +GR++ A EA G++ +V
Sbjct: 417 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 465
>gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform
a [Homo sapiens]
Length = 540
Score = 57.4 bits (137), Expect = 5e-08
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGF------ 66
++ R+ NA++T ++++I L A D + K ++ A F G D F
Sbjct: 298 VLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRN 356
Query: 67 ---SAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
+A T+ + V+ + +KP+V ++ G A G G + C A+ +A P
Sbjct: 357 NRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 416
Query: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV 172
T G P + P++ G +A +++ +GR++ A EA G++ +V
Sbjct: 417 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 465
>gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo
sapiens]
Length = 554
Score = 57.4 bits (137), Expect = 5e-08
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGF------ 66
++ R+ NA++T ++++I L A D + K ++ A F G D F
Sbjct: 298 VLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRN 356
Query: 67 ---SAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
+A T+ + V+ + +KP+V ++ G A G G + C A+ +A P
Sbjct: 357 NRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 416
Query: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV 172
T G P + P++ G +A +++ +GR++ A EA G++ +V
Sbjct: 417 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 465
>gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo
sapiens]
Length = 540
Score = 57.4 bits (137), Expect = 5e-08
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGF------ 66
++ R+ NA++T ++++I L A D + K ++ A F G D F
Sbjct: 298 VLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRN 356
Query: 67 ---SAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
+A T+ + V+ + +KP+V ++ G A G G + C A+ +A P
Sbjct: 357 NRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 416
Query: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV 172
T G P + P++ G +A +++ +GR++ A EA G++ +V
Sbjct: 417 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 465
>gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens]
Length = 541
Score = 56.2 bits (134), Expect = 1e-07
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGF------ 66
++ R+ NA++T +++++ L A D + K ++ A F G D F
Sbjct: 299 VLSTRSTEKNALNTEVIKEMVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVRHLRN 357
Query: 67 ---SAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
+A T+ + V+ + +KP+V ++ G A G G + C A+ +A P
Sbjct: 358 DRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 417
Query: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV 172
T G P + P++ G +A +++ +GR++ A EA G++ +V
Sbjct: 418 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 466
>gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens]
Length = 541
Score = 56.2 bits (134), Expect = 1e-07
Identities = 40/169 (23%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 13 LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGF------ 66
++ R+ NA++T +++++ L A D + K ++ A F G D F
Sbjct: 299 VLSTRSTEKNALNTEVIKEMVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVRHLRN 357
Query: 67 ---SAPRTFGLTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLP 123
+A T+ + V+ + +KP+V ++ G A G G + C A+ +A P
Sbjct: 358 DRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTP 417
Query: 124 EVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV 172
T G P + P++ G +A +++ +GR++ A EA G++ +V
Sbjct: 418 YTTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQV 466
>gi|71743840 class IV alcohol dehydrogenase, mu or sigma subunit
[Homo sapiens]
Length = 386
Score = 33.5 bits (75), Expect = 0.71
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 281 WSTPSGASWKTASARPVSSVGVVGLGTMGRGIVI---SFARARIPVIAVDSDKNQLATAN 337
+ST GA+ KT +P S+ V GLG +G +++ S +RI I ++ DK + A A
Sbjct: 188 FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 247
Query: 338 KMITSVLEKEASK 350
+ K+++K
Sbjct: 248 GATECISPKDSTK 260
>gi|156523966 class V alcohol dehydrogenase isoform 1 [Homo sapiens]
Length = 375
Score = 32.3 bits (72), Expect = 1.6
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 281 WSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISF-ARARIPVIAVDSDKNQLATANKM 339
+ST GA+ TA P S+ V GLG +G +V+ A +I VD +K + A ++
Sbjct: 177 FSTGFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQEL 236
>gi|4501939 class V alcohol dehydrogenase isoform 2 [Homo sapiens]
Length = 368
Score = 32.3 bits (72), Expect = 1.6
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 281 WSTPSGASWKTASARPVSSVGVVGLGTMGRGIVISF-ARARIPVIAVDSDKNQLATANKM 339
+ST GA+ TA P S+ V GLG +G +V+ A +I VD +K + A ++
Sbjct: 177 FSTGFGAAINTAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIGVDVNKEKFKKAQEL 236
>gi|71565154 class III alcohol dehydrogenase, chi subunit [Homo
sapiens]
Length = 374
Score = 30.8 bits (68), Expect = 4.6
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 282 STPSGASWKTASARPVSSVGVVGLGTMGRGIVISFARARIP-VIAVDSDKNQLATANK 338
ST GA+ TA P S V GLG +G +++ A +I VD +K++ A A +
Sbjct: 177 STGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 234
>gi|239757068 PREDICTED: hypothetical protein [Homo sapiens]
Length = 312
Score = 30.8 bits (68), Expect = 4.6
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 532 KSRKGQGLTGPTLLPGTPARKRGNRRYCPIPDVLCELGRFG 572
KS GQ P L P P RK+ + + DVLC LGR G
Sbjct: 235 KSNGGQRHLSPQLPPHGPQRKKRSYNPAILLDVLCILGRGG 275
>gi|239751578 PREDICTED: hypothetical protein [Homo sapiens]
Length = 312
Score = 30.8 bits (68), Expect = 4.6
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 532 KSRKGQGLTGPTLLPGTPARKRGNRRYCPIPDVLCELGRFG 572
KS GQ P L P P RK+ + + DVLC LGR G
Sbjct: 235 KSNGGQRHLSPQLPPHGPQRKKRSYNPAILLDVLCILGRGG 275
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,677,686
Number of Sequences: 37866
Number of extensions: 1346849
Number of successful extensions: 3104
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3051
Number of HSP's gapped (non-prelim): 37
length of query: 723
length of database: 18,247,518
effective HSP length: 110
effective length of query: 613
effective length of database: 14,082,258
effective search space: 8632424154
effective search space used: 8632424154
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.