Guide to the Human Genome
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Name: HADHA Sequence: fasta or formatted (763aa) NCBI GI: 20127408
Description:

mitochondrial trifunctional protein, alpha subunit precursor

Referenced in:

Fatty Acid Oxidation and Ketone Bodies

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         63           2
 C cysteine            1.7         13           1
 D aspartate           5.0         38           1
 E glutamate           6.0         46           2
 F phenylalanine       4.1         31           1
 G glycine             8.9         68           3
 H histidine           1.2          9           1
 I isoleucine          6.0         46           2
 K lysine              9.3         71           3
 L leucine             9.8         75           2
 M methionine          2.5         19           2
 N asparagine          2.2         17           1
 P proline             4.3         33           2
 Q glutamine           4.2         32           3
 R arginine            4.3         33           1
 S serine              6.3         48           2
 T threonine           5.0         38           2
 V valine              8.4         64           2
 W tryptophan          0.1          1           1
 Y tyrosine            2.4         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial trifunctional protein, alpha subunit p... 
EHHADH                0.177   enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A...
HADH                  0.093   L-3-hydroxyacyl-Coenzyme A dehydrogenase precursor [...
AUH                   0.057   AU RNA binding protein/enoyl-Coenzyme A hydratase pre...
ECHS1                 0.049   mitochondrial short-chain enoyl-coenzyme A hydratas...
ECH1                  0.035   peroxisomal enoyl-coenzyme A hydratase-like protein ...
DCI                   0.033   dodecenoyl-Coenzyme A delta isomerase precursor [Hom...
ECHDC2                0.030   enoyl Coenzyme A hydratase domain containing 2 [Hom...
CDYL                  0.029   chromodomain protein, Y chromosome-like isoform a [...
CDYL                  0.029   chromodomain protein, Y chromosome-like isoform d [...
CDYL                  0.029   chromodomain protein, Y chromosome-like isoform d [...
HIBCH                 0.027   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 2 [...
HIBCH                 0.027   3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 [...
ECHDC1                0.026   enoyl Coenzyme A hydratase domain containing 1 isof...
ECHDC1                0.026   enoyl Coenzyme A hydratase domain containing 1 isof...
CDYL2                 0.026   chromodomain protein, Y-like 2 
CRYL1                 0.025   lambda-crystallin 
ECHDC3                0.024   enoyl Coenzyme A hydratase domain containing 3 [Homo...
ECHDC1                0.023   enoyl Coenzyme A hydratase domain containing 1 isof...
CDY1                  0.022   Y chromosome chromodomain protein 1, telomeric isofor...
CDY1                  0.022   Y chromosome chromodomain protein 1, telomeric isofo...
CDY1B                 0.022   chromodomain protein, Y-linked, 1B isoform b 
CDY1B                 0.022   chromodomain protein, Y-linked, 1B isoform a 
CDY2B                 0.022   Y chromosome chromodomain protein 2B 
CDY2A                 0.022   Y chromosome chromodomain protein 2A 
PECI                  0.009   peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom...
PECI                  0.009   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
ULK2                  0.007   unc-51-like kinase 2 
ULK2                  0.007   unc-51-like kinase 2 
RBM44                 0.005   RNA binding motif protein 44 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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