BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|67189069 mucin 1 isoform 3 precursor [Homo sapiens] (255 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|67189069 mucin 1 isoform 3 precursor [Homo sapiens] 509 e-145 gi|67189007 mucin 1 isoform 2 precursor [Homo sapiens] 501 e-142 gi|65301117 mucin 1 isoform 1 precursor [Homo sapiens] 498 e-141 gi|113206024 mucin 1 isoform 5 precursor [Homo sapiens] 297 5e-81 gi|113206028 mucin 1 isoform 7 precursor [Homo sapiens] 160 8e-40 gi|113206026 mucin 1 isoform 6 precursor [Homo sapiens] 160 8e-40 gi|113206030 mucin 1 isoform 8 precursor [Homo sapiens] 105 4e-23 gi|239745235 PREDICTED: hypothetical protein [Homo sapiens] 42 5e-04 gi|239756347 PREDICTED: similar to taste receptor protein 1 [Hom... 39 0.006 gi|239750872 PREDICTED: similar to taste receptor protein 1 [Hom... 39 0.006 gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens] 34 0.14 gi|89903008 neurofascin isoform 4 precursor [Homo sapiens] 33 0.18 gi|115647981 glutamine and serine rich 1 [Homo sapiens] 33 0.24 gi|15042969 transmembrane protein 27 [Homo sapiens] 33 0.24 gi|237858679 neurofascin isoform 3 precursor [Homo sapiens] 32 0.70 gi|237858677 neurofascin isoform 2 precursor [Homo sapiens] 32 0.70 gi|23592222 olfactory receptor, family 5, subfamily P, member 2 ... 30 2.0 gi|38788260 bromodomain PHD finger transcription factor isoform ... 30 2.7 gi|38788274 bromodomain PHD finger transcription factor isoform ... 30 2.7 gi|50843827 activating molecule in beclin-1-regulated autophagy ... 29 3.5 gi|83367077 mucin 16 [Homo sapiens] 29 3.5 gi|117190342 PHD finger protein 2 [Homo sapiens] 29 4.6 gi|190194423 SPARC-like 1 [Homo sapiens] 29 4.6 gi|190341024 SPARC-like 1 [Homo sapiens] 29 4.6 gi|166295173 kin of IRRE like [Homo sapiens] 28 5.9 gi|38201644 homeodomain-interacting protein kinase 1 isoform 4 [... 28 5.9 gi|38201642 homeodomain-interacting protein kinase 1 isoform 3 [... 28 5.9 gi|38201640 homeodomain-interacting protein kinase 1 isoform 1 [... 28 5.9 gi|38201638 homeodomain-interacting protein kinase 1 isoform 2 [... 28 5.9 gi|42734375 ankyrin repeat and sterile alpha motif domain contai... 28 5.9 >gi|67189069 mucin 1 isoform 3 precursor [Homo sapiens] Length = 255 Score = 509 bits (1311), Expect = e-145 Identities = 255/255 (100%), Positives = 255/255 (100%) Query: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED Sbjct: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60 Query: 61 PSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQ 120 PSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQ Sbjct: 61 PSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQ 120 Query: 121 FNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA 180 FNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA Sbjct: 121 FNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA 180 Query: 181 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 240 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS Sbjct: 181 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 240 Query: 241 LSYTNPAVAATSANL 255 LSYTNPAVAATSANL Sbjct: 241 LSYTNPAVAATSANL 255 >gi|67189007 mucin 1 isoform 2 precursor [Homo sapiens] Length = 264 Score = 501 bits (1291), Expect = e-142 Identities = 255/264 (96%), Positives = 255/264 (96%), Gaps = 9/264 (3%) Query: 1 MTPGTQSPFFLLLLLTVLT---------VVTGSGHASSTPGGEKETSATQRSSVPSSTEK 51 MTPGTQSPFFLLLLLTVLT VVTGSGHASSTPGGEKETSATQRSSVPSSTEK Sbjct: 1 MTPGTQSPFFLLLLLTVLTATTAPKPATVVTGSGHASSTPGGEKETSATQRSSVPSSTEK 60 Query: 52 NAFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGT 111 NAFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGT Sbjct: 61 NAFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGT 120 Query: 112 INVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLV 171 INVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLV Sbjct: 121 INVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLV 180 Query: 172 ALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEK 231 ALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEK Sbjct: 181 ALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEK 240 Query: 232 VSAGNGGSSLSYTNPAVAATSANL 255 VSAGNGGSSLSYTNPAVAATSANL Sbjct: 241 VSAGNGGSSLSYTNPAVAATSANL 264 >gi|65301117 mucin 1 isoform 1 precursor [Homo sapiens] Length = 273 Score = 498 bits (1282), Expect = e-141 Identities = 255/273 (93%), Positives = 255/273 (93%), Gaps = 18/273 (6%) Query: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNA------- 53 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNA Sbjct: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNALSTGVSF 60 Query: 54 -----------FNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQ 102 FNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQ Sbjct: 61 FFLSFHISNLQFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQ 120 Query: 103 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIA 162 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIA Sbjct: 121 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIA 180 Query: 163 LLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPS 222 LLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPS Sbjct: 181 LLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPS 240 Query: 223 STDRSPYEKVSAGNGGSSLSYTNPAVAATSANL 255 STDRSPYEKVSAGNGGSSLSYTNPAVAATSANL Sbjct: 241 STDRSPYEKVSAGNGGSSLSYTNPAVAATSANL 273 >gi|113206024 mucin 1 isoform 5 precursor [Homo sapiens] Length = 203 Score = 297 bits (761), Expect = 5e-81 Identities = 165/255 (64%), Positives = 176/255 (69%), Gaps = 52/255 (20%) Query: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRS S + +++ Sbjct: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRS----SVPSSTEKNAIPA 56 Query: 61 PSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQ 120 P+T + + + F + +G F + Sbjct: 57 PTTT--KSCRETFLKCFCRFINKGVFWASPILS--------------------------- 87 Query: 121 FNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA 180 SVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA Sbjct: 88 -------------------SVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA 128 Query: 181 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 240 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS Sbjct: 129 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 188 Query: 241 LSYTNPAVAATSANL 255 LSYTNPAVAATSANL Sbjct: 189 LSYTNPAVAATSANL 203 >gi|113206028 mucin 1 isoform 7 precursor [Homo sapiens] Length = 159 Score = 160 bits (406), Expect = 8e-40 Identities = 74/75 (98%), Positives = 75/75 (100%) Query: 181 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 240 +AVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS Sbjct: 85 MAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 144 Query: 241 LSYTNPAVAATSANL 255 LSYTNPAVAATSANL Sbjct: 145 LSYTNPAVAATSANL 159 Score = 143 bits (361), Expect = 1e-34 Identities = 76/85 (89%), Positives = 76/85 (89%), Gaps = 9/85 (10%) Query: 1 MTPGTQSPFFLLLLLTVLT---------VVTGSGHASSTPGGEKETSATQRSSVPSSTEK 51 MTPGTQSPFFLLLLLTVLT VVTGSGHASSTPGGEKETSATQRSSVPSSTEK Sbjct: 1 MTPGTQSPFFLLLLLTVLTATTAPKPATVVTGSGHASSTPGGEKETSATQRSSVPSSTEK 60 Query: 52 NAFNSSLEDPSTDYYQELQRDISEM 76 NAFNSSLEDPSTDYYQELQRDISEM Sbjct: 61 NAFNSSLEDPSTDYYQELQRDISEM 85 >gi|113206026 mucin 1 isoform 6 precursor [Homo sapiens] Length = 150 Score = 160 bits (406), Expect = 8e-40 Identities = 74/75 (98%), Positives = 75/75 (100%) Query: 181 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 240 +AVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS Sbjct: 76 MAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 135 Query: 241 LSYTNPAVAATSANL 255 LSYTNPAVAATSANL Sbjct: 136 LSYTNPAVAATSANL 150 Score = 151 bits (381), Expect = 6e-37 Identities = 76/76 (100%), Positives = 76/76 (100%) Query: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED Sbjct: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60 Query: 61 PSTDYYQELQRDISEM 76 PSTDYYQELQRDISEM Sbjct: 61 PSTDYYQELQRDISEM 76 >gi|113206030 mucin 1 isoform 8 precursor [Homo sapiens] Length = 158 Score = 105 bits (262), Expect = 4e-23 Identities = 53/53 (100%), Positives = 53/53 (100%) Query: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNA 53 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNA Sbjct: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNA 53 >gi|239745235 PREDICTED: hypothetical protein [Homo sapiens] Length = 664 Score = 42.0 bits (97), Expect = 5e-04 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%) Query: 28 SSTPGGEKETSATQRSSVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--G 85 SSTPG T SV + AF+++L +P++ +Q L++ I +Y + G Sbjct: 213 SSTPGPSHMTR-----SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPG 267 Query: 86 FLGLSNIKFRPGSVVVQLTLAF 107 F G+ + FRPGSV V +L F Sbjct: 268 FQGIGVLVFRPGSVAVNASLVF 289 >gi|239756347 PREDICTED: similar to taste receptor protein 1 [Homo sapiens] Length = 562 Score = 38.5 bits (88), Expect = 0.006 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 44 SVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--GFLGLSNIKFRPGSVVV 101 SV + AF+++L +P++ +Q L++ I +Y + GF G+ + FRPGSV V Sbjct: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAV 63 Query: 102 QLTLAF 107 +L F Sbjct: 64 NASLVF 69 >gi|239750872 PREDICTED: similar to taste receptor protein 1 [Homo sapiens] Length = 562 Score = 38.5 bits (88), Expect = 0.006 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%) Query: 44 SVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--GFLGLSNIKFRPGSVVV 101 SV + AF+++L +P++ +Q L++ I +Y + GF G+ + FRPGSV V Sbjct: 4 SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAV 63 Query: 102 QLTLAF 107 +L F Sbjct: 64 NASLVF 69 >gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens] Length = 797 Score = 33.9 bits (76), Expect = 0.14 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%) Query: 53 AFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--GFLGLSNIKFRPGSVVVQLTLAFREG 110 AF++ L + S+ Y+ L++ +++ + + GF L + FR GSV+V + F + Sbjct: 585 AFSNDLFNKSSLEYRALEQQFTQLLVPYLRSNLTGFKQLEILNFRNGSVIVNSKMKFAKS 644 Query: 111 -----TINVHDVETQFNQYKTEAASRYNLTISDVSVSDVP 145 T VH V +++ AA + +L I S++ P Sbjct: 645 VPYNLTKAVHGV---LEDFRSAAAQQLHLEIDSYSLNIEP 681 Score = 33.1 bits (74), Expect = 0.24 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 15/123 (12%) Query: 31 PGGEKETSAT----QRSSVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQ-GG 85 P E+ET QR + S F + L D + YYQEL +I+K+ G Sbjct: 220 PTTERETEFAVLEEQRVELSVSLVNQKFKAELADSQSPYYQELAGKSQLQMQKIFKKLPG 279 Query: 86 FLGLSNIKFRP-------GSVVVQLTLAFREGTINVHDVET---QFNQYKTEAASRYNLT 135 F + + FRP S +QLT F+ + + F+ K E+ Y+ T Sbjct: 280 FKKIHVLGFRPKKEKDGSSSTEMQLTAIFKRHSAEAKSPASDLLSFDSNKIESEEVYHGT 339 Query: 136 ISD 138 + + Sbjct: 340 MEE 342 >gi|89903008 neurofascin isoform 4 precursor [Homo sapiens] Length = 1169 Score = 33.5 bits (75), Expect = 0.18 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 19/97 (19%) Query: 118 ETQFNQYKTEAASRYNLTIS--------DVSVSDVPFP-----FSAQSGAGVPGWGIALL 164 +T+F +T+ SRY T+S + + P P + Q+ GW I L Sbjct: 985 QTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEAYTNNQADIATQGWFIGL- 1043 Query: 165 VLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARD 201 + A+A++ LI L VC +R G+ + +D Sbjct: 1044 -----MCAIALLVLILLIVCFIKRSRGGKYPVREKKD 1075 >gi|115647981 glutamine and serine rich 1 [Homo sapiens] Length = 1735 Score = 33.1 bits (74), Expect = 0.24 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query: 28 SSTPGGEKETSATQRSSVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFL 87 SS+P +K A Q SS SST +++ P Y E + D S+++ ++ GF Sbjct: 507 SSSPQSQKFLPAVQSSSFASSTHCQTLQNNITSPDPKSYAERKLD-SDVYPSSKQEDGFP 565 Query: 88 GLSNIKFRPGSVVVQLTLAFREGTINVHDVETQFNQYK-TEAASRYNLTI 136 +P + + T +G IN Q + YK ++A RY+ ++ Sbjct: 566 MQELQVLQPQASLESSTQRLSDGEIN-----AQESTYKVSKADDRYSQSV 610 >gi|15042969 transmembrane protein 27 [Homo sapiens] Length = 222 Score = 33.1 bits (74), Expect = 0.24 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 1/91 (1%) Query: 111 TINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVL 170 T+ +V++ K + + L + +P + VP W I V+ C++ Sbjct: 95 TLPAVEVQSAIRMNKNRINNAFFLNDQTLEFLKIPSTLAPPMDPSVPIWIIIFGVIFCII 154 Query: 171 VALAIVYLIALAVCQCRRKNYGQLDIFPARD 201 + +AI LI + Q RRKN ++ A D Sbjct: 155 I-VAIALLILSGIWQRRRKNKEPSEVDDAED 184 >gi|237858679 neurofascin isoform 3 precursor [Homo sapiens] Length = 1174 Score = 31.6 bits (70), Expect = 0.70 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 24/102 (23%) Query: 118 ETQFNQYKTEAASRYNLTIS--------DVSVSDVPFP----------FSAQSGAGVPGW 159 +T+F +T+ SRY T+S + + P P + Q+ GW Sbjct: 985 QTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAYTNNQADIATQGW 1044 Query: 160 GIALLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARD 201 I L + A+A++ LI L VC +R G+ + +D Sbjct: 1045 FIGL------MCAIALLVLILLIVCFIKRSRGGKYPVREKKD 1080 >gi|237858677 neurofascin isoform 2 precursor [Homo sapiens] Length = 1189 Score = 31.6 bits (70), Expect = 0.70 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 24/102 (23%) Query: 118 ETQFNQYKTEAASRYNLTIS--------DVSVSDVPFP----------FSAQSGAGVPGW 159 +T+F +T+ SRY T+S + + P P + Q+ GW Sbjct: 1000 QTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAYTNNQADIATQGW 1059 Query: 160 GIALLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARD 201 I L + A+A++ LI L VC +R G+ + +D Sbjct: 1060 FIGL------MCAIALLVLILLIVCFIKRSRGGKYPVREKKD 1095 >gi|23592222 olfactory receptor, family 5, subfamily P, member 2 [Homo sapiens] Length = 322 Score = 30.0 bits (66), Expect = 2.0 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 9/62 (14%) Query: 120 QFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLI 179 Q N + + A L+ SD+SVS V FS+ G ++V VCV+ I LI Sbjct: 169 QVNHFFCDFAPLLELSCSDISVSTVVLSFSS---------GSIIVVTVCVIAVCYIYILI 219 Query: 180 AL 181 + Sbjct: 220 TI 221 >gi|38788260 bromodomain PHD finger transcription factor isoform 2 [Homo sapiens] Length = 2903 Score = 29.6 bits (65), Expect = 2.7 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 9/89 (10%) Query: 17 VLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLEDPSTDYYQELQRDISEM 76 V T V+ SSTPG + TSAT S++ SS + P +++ ++++ Sbjct: 2228 VSTAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQ---------PPRPQQGQVKLTMAQL 2278 Query: 77 FLQIYKQGGFLGLSNIKFRPGSVVVQLTL 105 GG GL+ + G QL L Sbjct: 2279 TQLTQGHGGNQGLTVVIQGQGQTTGQLQL 2307 >gi|38788274 bromodomain PHD finger transcription factor isoform 1 [Homo sapiens] Length = 2920 Score = 29.6 bits (65), Expect = 2.7 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 9/89 (10%) Query: 17 VLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLEDPSTDYYQELQRDISEM 76 V T V+ SSTPG + TSAT S++ SS + P +++ ++++ Sbjct: 2102 VSTAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQ---------PPRPQQGQVKLTMAQL 2152 Query: 77 FLQIYKQGGFLGLSNIKFRPGSVVVQLTL 105 GG GL+ + G QL L Sbjct: 2153 TQLTQGHGGNQGLTVVIQGQGQTTGQLQL 2181 >gi|50843827 activating molecule in beclin-1-regulated autophagy [Homo sapiens] Length = 1208 Score = 29.3 bits (64), Expect = 3.5 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 9/69 (13%) Query: 14 LLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSS---TEKNAFNSSLEDPSTDYYQELQ 70 LL+VL G AS TSAT+ P+S TE + N S ++ S ELQ Sbjct: 357 LLSVLRQQEGGSQASVY------TSATEGRGFPASGLATESDGGNGSSQNNSGSIRHELQ 410 Query: 71 RDISEMFLQ 79 D+ FL+ Sbjct: 411 CDLRRFFLE 419 >gi|83367077 mucin 16 [Homo sapiens] Length = 14507 Score = 29.3 bits (64), Expect = 3.5 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 13/85 (15%) Query: 2 TPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRS---------SVPSSTEKN 52 +PG S L L + T +G+ H++++PG T S S+PS E + Sbjct: 8501 SPGATSEGTLTLDTSTTTFWSGT-HSTASPGFSHSEMTTLMSRTPGDVPWPSLPSVEEAS 8559 Query: 53 AFNSSLEDP---STDYYQELQRDIS 74 + +SSL P ST ++ L IS Sbjct: 8560 SVSSSLSSPAMTSTSFFSTLPESIS 8584 >gi|117190342 PHD finger protein 2 [Homo sapiens] Length = 1096 Score = 28.9 bits (63), Expect = 4.6 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Query: 1 MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60 +TP T SP T ++ G+ S+TP S T S+ +S++ + SS E Sbjct: 959 LTPNTTSPS------TSTSISAGTTSTSTTPASTTPASTTPASTSTASSQASQEGSSPEP 1012 Query: 61 PSTDYYQEL 69 P + L Sbjct: 1013 PPESHSSSL 1021 >gi|190194423 SPARC-like 1 [Homo sapiens] Length = 664 Score = 28.9 bits (63), Expect = 4.6 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 11/119 (9%) Query: 9 FFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPS---STEKNAFNSSLEDPSTDY 65 FFL LL T + T + S ET A +++PS E+N +++ + Sbjct: 6 FFLCLLGTAAAIPTNARLLSDHSKPTAETVAPDNTAIPSLRAEAEENEKETAVSTEDDSH 65 Query: 66 YQELQRDI----SEMFLQIYKQGGF----LGLSNIKFRPGSVVVQLTLAFREGTINVHD 116 ++ + + E Q +QG LGL + + G + V L A EGT+++ + Sbjct: 66 HKAEKSSVLKSKEESHEQSAEQGKSSSQELGLKDQEDSDGHLSVNLEYAPTEGTLDIKE 124 >gi|190341024 SPARC-like 1 [Homo sapiens] Length = 664 Score = 28.9 bits (63), Expect = 4.6 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 11/119 (9%) Query: 9 FFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPS---STEKNAFNSSLEDPSTDY 65 FFL LL T + T + S ET A +++PS E+N +++ + Sbjct: 6 FFLCLLGTAAAIPTNARLLSDHSKPTAETVAPDNTAIPSLRAEAEENEKETAVSTEDDSH 65 Query: 66 YQELQRDI----SEMFLQIYKQGGF----LGLSNIKFRPGSVVVQLTLAFREGTINVHD 116 ++ + + E Q +QG LGL + + G + V L A EGT+++ + Sbjct: 66 HKAEKSSVLKSKEESHEQSAEQGKSSSQELGLKDQEDSDGHLSVNLEYAPTEGTLDIKE 124 >gi|166295173 kin of IRRE like [Homo sapiens] Length = 757 Score = 28.5 bits (62), Expect = 5.9 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Query: 185 QCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYE 230 Q +NY + + P + + YPTY PPS +R+PYE Sbjct: 681 QLSYENYEKFNSHP----FPGAAGYPTYRLGYPQAPPSGLERTPYE 722 >gi|38201644 homeodomain-interacting protein kinase 1 isoform 4 [Homo sapiens] Length = 816 Score = 28.5 bits (62), Expect = 5.9 Identities = 18/56 (32%), Positives = 26/56 (46%) Query: 103 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPG 158 LT++F VH+ + T AA+ +L SDVS+ + S A VPG Sbjct: 177 LTMSFSNQLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPG 232 >gi|38201642 homeodomain-interacting protein kinase 1 isoform 3 [Homo sapiens] Length = 836 Score = 28.5 bits (62), Expect = 5.9 Identities = 18/56 (32%), Positives = 26/56 (46%) Query: 103 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPG 158 LT++F VH+ + T AA+ +L SDVS+ + S A VPG Sbjct: 197 LTMSFSNQLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPG 252 >gi|38201640 homeodomain-interacting protein kinase 1 isoform 1 [Homo sapiens] Length = 1210 Score = 28.5 bits (62), Expect = 5.9 Identities = 18/56 (32%), Positives = 26/56 (46%) Query: 103 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPG 158 LT++F VH+ + T AA+ +L SDVS+ + S A VPG Sbjct: 571 LTMSFSNQLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPG 626 >gi|38201638 homeodomain-interacting protein kinase 1 isoform 2 [Homo sapiens] Length = 1075 Score = 28.5 bits (62), Expect = 5.9 Identities = 18/56 (32%), Positives = 26/56 (46%) Query: 103 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPG 158 LT++F VH+ + T AA+ +L SDVS+ + S A VPG Sbjct: 571 LTMSFSNQLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPG 626 >gi|42734375 ankyrin repeat and sterile alpha motif domain containing 3 [Homo sapiens] Length = 656 Score = 28.5 bits (62), Expect = 5.9 Identities = 15/46 (32%), Positives = 20/46 (43%) Query: 182 AVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRS 227 A + K YG + I DTY P Y + +Y SS+D S Sbjct: 203 ATARMLAKQYGHMKIVALMDTYSPSLPKSLYRSPEKYEDLSSSDES 248 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.131 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,760,941 Number of Sequences: 37866 Number of extensions: 408935 Number of successful extensions: 1837 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 1784 Number of HSP's gapped (non-prelim): 73 length of query: 255 length of database: 18,247,518 effective HSP length: 100 effective length of query: 155 effective length of database: 14,460,918 effective search space: 2241442290 effective search space used: 2241442290 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.