Guide to the Human Genome
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Search of human proteins with 67189069

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|67189069 mucin 1 isoform 3 precursor [Homo sapiens]
         (255 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|67189069 mucin 1 isoform 3 precursor [Homo sapiens]                509   e-145
gi|67189007 mucin 1 isoform 2 precursor [Homo sapiens]                501   e-142
gi|65301117 mucin 1 isoform 1 precursor [Homo sapiens]                498   e-141
gi|113206024 mucin 1 isoform 5 precursor [Homo sapiens]               297   5e-81
gi|113206028 mucin 1 isoform 7 precursor [Homo sapiens]               160   8e-40
gi|113206026 mucin 1 isoform 6 precursor [Homo sapiens]               160   8e-40
gi|113206030 mucin 1 isoform 8 precursor [Homo sapiens]               105   4e-23
gi|239745235 PREDICTED: hypothetical protein [Homo sapiens]            42   5e-04
gi|239756347 PREDICTED: similar to taste receptor protein 1 [Hom...    39   0.006
gi|239750872 PREDICTED: similar to taste receptor protein 1 [Hom...    39   0.006
gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens]     34   0.14 
gi|89903008 neurofascin isoform 4 precursor [Homo sapiens]             33   0.18 
gi|115647981 glutamine and serine rich 1 [Homo sapiens]                33   0.24 
gi|15042969 transmembrane protein 27 [Homo sapiens]                    33   0.24 
gi|237858679 neurofascin isoform 3 precursor [Homo sapiens]            32   0.70 
gi|237858677 neurofascin isoform 2 precursor [Homo sapiens]            32   0.70 
gi|23592222 olfactory receptor, family 5, subfamily P, member 2 ...    30   2.0  
gi|38788260 bromodomain PHD finger transcription factor isoform ...    30   2.7  
gi|38788274 bromodomain PHD finger transcription factor isoform ...    30   2.7  
gi|50843827 activating molecule in beclin-1-regulated autophagy ...    29   3.5  
gi|83367077 mucin 16 [Homo sapiens]                                    29   3.5  
gi|117190342 PHD finger protein 2 [Homo sapiens]                       29   4.6  
gi|190194423 SPARC-like 1 [Homo sapiens]                               29   4.6  
gi|190341024 SPARC-like 1 [Homo sapiens]                               29   4.6  
gi|166295173 kin of IRRE like [Homo sapiens]                           28   5.9  
gi|38201644 homeodomain-interacting protein kinase 1 isoform 4 [...    28   5.9  
gi|38201642 homeodomain-interacting protein kinase 1 isoform 3 [...    28   5.9  
gi|38201640 homeodomain-interacting protein kinase 1 isoform 1 [...    28   5.9  
gi|38201638 homeodomain-interacting protein kinase 1 isoform 2 [...    28   5.9  
gi|42734375 ankyrin repeat and sterile alpha motif domain contai...    28   5.9  

>gi|67189069 mucin 1 isoform 3 precursor [Homo sapiens]
          Length = 255

 Score =  509 bits (1311), Expect = e-145
 Identities = 255/255 (100%), Positives = 255/255 (100%)

Query: 1   MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60
           MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED
Sbjct: 1   MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60

Query: 61  PSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQ 120
           PSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQ
Sbjct: 61  PSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQ 120

Query: 121 FNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA 180
           FNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA
Sbjct: 121 FNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA 180

Query: 181 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 240
           LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS
Sbjct: 181 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 240

Query: 241 LSYTNPAVAATSANL 255
           LSYTNPAVAATSANL
Sbjct: 241 LSYTNPAVAATSANL 255


>gi|67189007 mucin 1 isoform 2 precursor [Homo sapiens]
          Length = 264

 Score =  501 bits (1291), Expect = e-142
 Identities = 255/264 (96%), Positives = 255/264 (96%), Gaps = 9/264 (3%)

Query: 1   MTPGTQSPFFLLLLLTVLT---------VVTGSGHASSTPGGEKETSATQRSSVPSSTEK 51
           MTPGTQSPFFLLLLLTVLT         VVTGSGHASSTPGGEKETSATQRSSVPSSTEK
Sbjct: 1   MTPGTQSPFFLLLLLTVLTATTAPKPATVVTGSGHASSTPGGEKETSATQRSSVPSSTEK 60

Query: 52  NAFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGT 111
           NAFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGT
Sbjct: 61  NAFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGT 120

Query: 112 INVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLV 171
           INVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLV
Sbjct: 121 INVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLV 180

Query: 172 ALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEK 231
           ALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEK
Sbjct: 181 ALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEK 240

Query: 232 VSAGNGGSSLSYTNPAVAATSANL 255
           VSAGNGGSSLSYTNPAVAATSANL
Sbjct: 241 VSAGNGGSSLSYTNPAVAATSANL 264


>gi|65301117 mucin 1 isoform 1 precursor [Homo sapiens]
          Length = 273

 Score =  498 bits (1282), Expect = e-141
 Identities = 255/273 (93%), Positives = 255/273 (93%), Gaps = 18/273 (6%)

Query: 1   MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNA------- 53
           MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNA       
Sbjct: 1   MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNALSTGVSF 60

Query: 54  -----------FNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQ 102
                      FNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQ
Sbjct: 61  FFLSFHISNLQFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQ 120

Query: 103 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIA 162
           LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIA
Sbjct: 121 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIA 180

Query: 163 LLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPS 222
           LLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPS
Sbjct: 181 LLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPS 240

Query: 223 STDRSPYEKVSAGNGGSSLSYTNPAVAATSANL 255
           STDRSPYEKVSAGNGGSSLSYTNPAVAATSANL
Sbjct: 241 STDRSPYEKVSAGNGGSSLSYTNPAVAATSANL 273


>gi|113206024 mucin 1 isoform 5 precursor [Homo sapiens]
          Length = 203

 Score =  297 bits (761), Expect = 5e-81
 Identities = 165/255 (64%), Positives = 176/255 (69%), Gaps = 52/255 (20%)

Query: 1   MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60
           MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRS    S   +   +++  
Sbjct: 1   MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRS----SVPSSTEKNAIPA 56

Query: 61  PSTDYYQELQRDISEMFLQIYKQGGFLGLSNIKFRPGSVVVQLTLAFREGTINVHDVETQ 120
           P+T   +  +    + F +   +G F     +                            
Sbjct: 57  PTTT--KSCRETFLKCFCRFINKGVFWASPILS--------------------------- 87

Query: 121 FNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA 180
                              SVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA
Sbjct: 88  -------------------SVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLIA 128

Query: 181 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 240
           LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS
Sbjct: 129 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 188

Query: 241 LSYTNPAVAATSANL 255
           LSYTNPAVAATSANL
Sbjct: 189 LSYTNPAVAATSANL 203


>gi|113206028 mucin 1 isoform 7 precursor [Homo sapiens]
          Length = 159

 Score =  160 bits (406), Expect = 8e-40
 Identities = 74/75 (98%), Positives = 75/75 (100%)

Query: 181 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 240
           +AVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS
Sbjct: 85  MAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 144

Query: 241 LSYTNPAVAATSANL 255
           LSYTNPAVAATSANL
Sbjct: 145 LSYTNPAVAATSANL 159



 Score =  143 bits (361), Expect = 1e-34
 Identities = 76/85 (89%), Positives = 76/85 (89%), Gaps = 9/85 (10%)

Query: 1  MTPGTQSPFFLLLLLTVLT---------VVTGSGHASSTPGGEKETSATQRSSVPSSTEK 51
          MTPGTQSPFFLLLLLTVLT         VVTGSGHASSTPGGEKETSATQRSSVPSSTEK
Sbjct: 1  MTPGTQSPFFLLLLLTVLTATTAPKPATVVTGSGHASSTPGGEKETSATQRSSVPSSTEK 60

Query: 52 NAFNSSLEDPSTDYYQELQRDISEM 76
          NAFNSSLEDPSTDYYQELQRDISEM
Sbjct: 61 NAFNSSLEDPSTDYYQELQRDISEM 85


>gi|113206026 mucin 1 isoform 6 precursor [Homo sapiens]
          Length = 150

 Score =  160 bits (406), Expect = 8e-40
 Identities = 74/75 (98%), Positives = 75/75 (100%)

Query: 181 LAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 240
           +AVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS
Sbjct: 76  MAVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYEKVSAGNGGSS 135

Query: 241 LSYTNPAVAATSANL 255
           LSYTNPAVAATSANL
Sbjct: 136 LSYTNPAVAATSANL 150



 Score =  151 bits (381), Expect = 6e-37
 Identities = 76/76 (100%), Positives = 76/76 (100%)

Query: 1  MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60
          MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED
Sbjct: 1  MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60

Query: 61 PSTDYYQELQRDISEM 76
          PSTDYYQELQRDISEM
Sbjct: 61 PSTDYYQELQRDISEM 76


>gi|113206030 mucin 1 isoform 8 precursor [Homo sapiens]
          Length = 158

 Score =  105 bits (262), Expect = 4e-23
 Identities = 53/53 (100%), Positives = 53/53 (100%)

Query: 1  MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNA 53
          MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNA
Sbjct: 1  MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNA 53


>gi|239745235 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 664

 Score = 42.0 bits (97), Expect = 5e-04
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)

Query: 28  SSTPGGEKETSATQRSSVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--G 85
           SSTPG    T      SV  +    AF+++L +P++  +Q L++ I      +Y +   G
Sbjct: 213 SSTPGPSHMTR-----SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPG 267

Query: 86  FLGLSNIKFRPGSVVVQLTLAF 107
           F G+  + FRPGSV V  +L F
Sbjct: 268 FQGIGVLVFRPGSVAVNASLVF 289


>gi|239756347 PREDICTED: similar to taste receptor protein 1 [Homo
           sapiens]
          Length = 562

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 44  SVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--GFLGLSNIKFRPGSVVV 101
           SV  +    AF+++L +P++  +Q L++ I      +Y +   GF G+  + FRPGSV V
Sbjct: 4   SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAV 63

Query: 102 QLTLAF 107
             +L F
Sbjct: 64  NASLVF 69


>gi|239750872 PREDICTED: similar to taste receptor protein 1 [Homo
           sapiens]
          Length = 562

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 44  SVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--GFLGLSNIKFRPGSVVV 101
           SV  +    AF+++L +P++  +Q L++ I      +Y +   GF G+  + FRPGSV V
Sbjct: 4   SVTFTITNEAFSAALLNPASWKHQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAV 63

Query: 102 QLTLAF 107
             +L F
Sbjct: 64  NASLVF 69


>gi|6631090 interphotoreceptor matrix proteoglycan 1 [Homo sapiens]
          Length = 797

 Score = 33.9 bits (76), Expect = 0.14
 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 10/100 (10%)

Query: 53  AFNSSLEDPSTDYYQELQRDISEMFLQIYKQG--GFLGLSNIKFRPGSVVVQLTLAFREG 110
           AF++ L + S+  Y+ L++  +++ +   +    GF  L  + FR GSV+V   + F + 
Sbjct: 585 AFSNDLFNKSSLEYRALEQQFTQLLVPYLRSNLTGFKQLEILNFRNGSVIVNSKMKFAKS 644

Query: 111 -----TINVHDVETQFNQYKTEAASRYNLTISDVSVSDVP 145
                T  VH V      +++ AA + +L I   S++  P
Sbjct: 645 VPYNLTKAVHGV---LEDFRSAAAQQLHLEIDSYSLNIEP 681



 Score = 33.1 bits (74), Expect = 0.24
 Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 15/123 (12%)

Query: 31  PGGEKETSAT----QRSSVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQ-GG 85
           P  E+ET       QR  +  S     F + L D  + YYQEL         +I+K+  G
Sbjct: 220 PTTERETEFAVLEEQRVELSVSLVNQKFKAELADSQSPYYQELAGKSQLQMQKIFKKLPG 279

Query: 86  FLGLSNIKFRP-------GSVVVQLTLAFREGTINVHDVET---QFNQYKTEAASRYNLT 135
           F  +  + FRP        S  +QLT  F+  +       +    F+  K E+   Y+ T
Sbjct: 280 FKKIHVLGFRPKKEKDGSSSTEMQLTAIFKRHSAEAKSPASDLLSFDSNKIESEEVYHGT 339

Query: 136 ISD 138
           + +
Sbjct: 340 MEE 342


>gi|89903008 neurofascin isoform 4 precursor [Homo sapiens]
          Length = 1169

 Score = 33.5 bits (75), Expect = 0.18
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 19/97 (19%)

Query: 118  ETQFNQYKTEAASRYNLTIS--------DVSVSDVPFP-----FSAQSGAGVPGWGIALL 164
            +T+F   +T+  SRY  T+S        +    + P P      + Q+     GW I L 
Sbjct: 985  QTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEAYTNNQADIATQGWFIGL- 1043

Query: 165  VLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARD 201
                 + A+A++ LI L VC  +R   G+  +   +D
Sbjct: 1044 -----MCAIALLVLILLIVCFIKRSRGGKYPVREKKD 1075


>gi|115647981 glutamine and serine rich 1 [Homo sapiens]
          Length = 1735

 Score = 33.1 bits (74), Expect = 0.24
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 7/110 (6%)

Query: 28  SSTPGGEKETSATQRSSVPSSTEKNAFNSSLEDPSTDYYQELQRDISEMFLQIYKQGGFL 87
           SS+P  +K   A Q SS  SST      +++  P    Y E + D S+++    ++ GF 
Sbjct: 507 SSSPQSQKFLPAVQSSSFASSTHCQTLQNNITSPDPKSYAERKLD-SDVYPSSKQEDGFP 565

Query: 88  GLSNIKFRPGSVVVQLTLAFREGTINVHDVETQFNQYK-TEAASRYNLTI 136
                  +P + +   T    +G IN      Q + YK ++A  RY+ ++
Sbjct: 566 MQELQVLQPQASLESSTQRLSDGEIN-----AQESTYKVSKADDRYSQSV 610


>gi|15042969 transmembrane protein 27 [Homo sapiens]
          Length = 222

 Score = 33.1 bits (74), Expect = 0.24
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 1/91 (1%)

Query: 111 TINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVL 170
           T+   +V++     K    + + L    +    +P   +      VP W I   V+ C++
Sbjct: 95  TLPAVEVQSAIRMNKNRINNAFFLNDQTLEFLKIPSTLAPPMDPSVPIWIIIFGVIFCII 154

Query: 171 VALAIVYLIALAVCQCRRKNYGQLDIFPARD 201
           + +AI  LI   + Q RRKN    ++  A D
Sbjct: 155 I-VAIALLILSGIWQRRRKNKEPSEVDDAED 184


>gi|237858679 neurofascin isoform 3 precursor [Homo sapiens]
          Length = 1174

 Score = 31.6 bits (70), Expect = 0.70
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 24/102 (23%)

Query: 118  ETQFNQYKTEAASRYNLTIS--------DVSVSDVPFP----------FSAQSGAGVPGW 159
            +T+F   +T+  SRY  T+S        +    + P P           + Q+     GW
Sbjct: 985  QTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAYTNNQADIATQGW 1044

Query: 160  GIALLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARD 201
             I L      + A+A++ LI L VC  +R   G+  +   +D
Sbjct: 1045 FIGL------MCAIALLVLILLIVCFIKRSRGGKYPVREKKD 1080


>gi|237858677 neurofascin isoform 2 precursor [Homo sapiens]
          Length = 1189

 Score = 31.6 bits (70), Expect = 0.70
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 24/102 (23%)

Query: 118  ETQFNQYKTEAASRYNLTIS--------DVSVSDVPFP----------FSAQSGAGVPGW 159
            +T+F   +T+  SRY  T+S        +    + P P           + Q+     GW
Sbjct: 1000 QTKFTVQRTDPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAYTNNQADIATQGW 1059

Query: 160  GIALLVLVCVLVALAIVYLIALAVCQCRRKNYGQLDIFPARD 201
             I L      + A+A++ LI L VC  +R   G+  +   +D
Sbjct: 1060 FIGL------MCAIALLVLILLIVCFIKRSRGGKYPVREKKD 1095


>gi|23592222 olfactory receptor, family 5, subfamily P, member 2
           [Homo sapiens]
          Length = 322

 Score = 30.0 bits (66), Expect = 2.0
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 120 QFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPGWGIALLVLVCVLVALAIVYLI 179
           Q N +  + A    L+ SD+SVS V   FS+         G  ++V VCV+    I  LI
Sbjct: 169 QVNHFFCDFAPLLELSCSDISVSTVVLSFSS---------GSIIVVTVCVIAVCYIYILI 219

Query: 180 AL 181
            +
Sbjct: 220 TI 221


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
            [Homo sapiens]
          Length = 2903

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 9/89 (10%)

Query: 17   VLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLEDPSTDYYQELQRDISEM 76
            V T V+     SSTPG +  TSAT  S++ SS  +         P      +++  ++++
Sbjct: 2228 VSTAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQ---------PPRPQQGQVKLTMAQL 2278

Query: 77   FLQIYKQGGFLGLSNIKFRPGSVVVQLTL 105
                   GG  GL+ +    G    QL L
Sbjct: 2279 TQLTQGHGGNQGLTVVIQGQGQTTGQLQL 2307


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
            [Homo sapiens]
          Length = 2920

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 9/89 (10%)

Query: 17   VLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLEDPSTDYYQELQRDISEM 76
            V T V+     SSTPG +  TSAT  S++ SS  +         P      +++  ++++
Sbjct: 2102 VSTAVSAPNTVSSTPGQKSLTSATSTSNIQSSASQ---------PPRPQQGQVKLTMAQL 2152

Query: 77   FLQIYKQGGFLGLSNIKFRPGSVVVQLTL 105
                   GG  GL+ +    G    QL L
Sbjct: 2153 TQLTQGHGGNQGLTVVIQGQGQTTGQLQL 2181


>gi|50843827 activating molecule in beclin-1-regulated autophagy
           [Homo sapiens]
          Length = 1208

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 9/69 (13%)

Query: 14  LLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSS---TEKNAFNSSLEDPSTDYYQELQ 70
           LL+VL    G   AS        TSAT+    P+S   TE +  N S ++ S     ELQ
Sbjct: 357 LLSVLRQQEGGSQASVY------TSATEGRGFPASGLATESDGGNGSSQNNSGSIRHELQ 410

Query: 71  RDISEMFLQ 79
            D+   FL+
Sbjct: 411 CDLRRFFLE 419


>gi|83367077 mucin 16 [Homo sapiens]
          Length = 14507

 Score = 29.3 bits (64), Expect = 3.5
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 13/85 (15%)

Query: 2    TPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRS---------SVPSSTEKN 52
            +PG  S   L L  +  T  +G+ H++++PG       T  S         S+PS  E +
Sbjct: 8501 SPGATSEGTLTLDTSTTTFWSGT-HSTASPGFSHSEMTTLMSRTPGDVPWPSLPSVEEAS 8559

Query: 53   AFNSSLEDP---STDYYQELQRDIS 74
            + +SSL  P   ST ++  L   IS
Sbjct: 8560 SVSSSLSSPAMTSTSFFSTLPESIS 8584


>gi|117190342 PHD finger protein 2 [Homo sapiens]
          Length = 1096

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 1    MTPGTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAFNSSLED 60
            +TP T SP       T  ++  G+   S+TP      S T  S+  +S++ +   SS E 
Sbjct: 959  LTPNTTSPS------TSTSISAGTTSTSTTPASTTPASTTPASTSTASSQASQEGSSPEP 1012

Query: 61   PSTDYYQEL 69
            P   +   L
Sbjct: 1013 PPESHSSSL 1021


>gi|190194423 SPARC-like 1 [Homo sapiens]
          Length = 664

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 11/119 (9%)

Query: 9   FFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPS---STEKNAFNSSLEDPSTDY 65
           FFL LL T   + T +   S       ET A   +++PS     E+N   +++      +
Sbjct: 6   FFLCLLGTAAAIPTNARLLSDHSKPTAETVAPDNTAIPSLRAEAEENEKETAVSTEDDSH 65

Query: 66  YQELQRDI----SEMFLQIYKQGGF----LGLSNIKFRPGSVVVQLTLAFREGTINVHD 116
           ++  +  +     E   Q  +QG      LGL + +   G + V L  A  EGT+++ +
Sbjct: 66  HKAEKSSVLKSKEESHEQSAEQGKSSSQELGLKDQEDSDGHLSVNLEYAPTEGTLDIKE 124


>gi|190341024 SPARC-like 1 [Homo sapiens]
          Length = 664

 Score = 28.9 bits (63), Expect = 4.6
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 11/119 (9%)

Query: 9   FFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPS---STEKNAFNSSLEDPSTDY 65
           FFL LL T   + T +   S       ET A   +++PS     E+N   +++      +
Sbjct: 6   FFLCLLGTAAAIPTNARLLSDHSKPTAETVAPDNTAIPSLRAEAEENEKETAVSTEDDSH 65

Query: 66  YQELQRDI----SEMFLQIYKQGGF----LGLSNIKFRPGSVVVQLTLAFREGTINVHD 116
           ++  +  +     E   Q  +QG      LGL + +   G + V L  A  EGT+++ +
Sbjct: 66  HKAEKSSVLKSKEESHEQSAEQGKSSSQELGLKDQEDSDGHLSVNLEYAPTEGTLDIKE 124


>gi|166295173 kin of IRRE like [Homo sapiens]
          Length = 757

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 185 QCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRSPYE 230
           Q   +NY + +  P    +   + YPTY       PPS  +R+PYE
Sbjct: 681 QLSYENYEKFNSHP----FPGAAGYPTYRLGYPQAPPSGLERTPYE 722


>gi|38201644 homeodomain-interacting protein kinase 1 isoform 4
           [Homo sapiens]
          Length = 816

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)

Query: 103 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPG 158
           LT++F      VH+  +      T AA+  +L  SDVS+ +        S A VPG
Sbjct: 177 LTMSFSNQLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPG 232


>gi|38201642 homeodomain-interacting protein kinase 1 isoform 3
           [Homo sapiens]
          Length = 836

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)

Query: 103 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPG 158
           LT++F      VH+  +      T AA+  +L  SDVS+ +        S A VPG
Sbjct: 197 LTMSFSNQLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPG 252


>gi|38201640 homeodomain-interacting protein kinase 1 isoform 1
           [Homo sapiens]
          Length = 1210

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)

Query: 103 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPG 158
           LT++F      VH+  +      T AA+  +L  SDVS+ +        S A VPG
Sbjct: 571 LTMSFSNQLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPG 626


>gi|38201638 homeodomain-interacting protein kinase 1 isoform 2
           [Homo sapiens]
          Length = 1075

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)

Query: 103 LTLAFREGTINVHDVETQFNQYKTEAASRYNLTISDVSVSDVPFPFSAQSGAGVPG 158
           LT++F      VH+  +      T AA+  +L  SDVS+ +        S A VPG
Sbjct: 571 LTMSFSNQLNTVHNQASVLASSSTAAAATLSLANSDVSLLNYQSALYPSSAAPVPG 626


>gi|42734375 ankyrin repeat and sterile alpha motif domain
           containing 3 [Homo sapiens]
          Length = 656

 Score = 28.5 bits (62), Expect = 5.9
 Identities = 15/46 (32%), Positives = 20/46 (43%)

Query: 182 AVCQCRRKNYGQLDIFPARDTYHPMSEYPTYHTHGRYVPPSSTDRS 227
           A  +   K YG + I    DTY P      Y +  +Y   SS+D S
Sbjct: 203 ATARMLAKQYGHMKIVALMDTYSPSLPKSLYRSPEKYEDLSSSDES 248


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.131    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,760,941
Number of Sequences: 37866
Number of extensions: 408935
Number of successful extensions: 1837
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1784
Number of HSP's gapped (non-prelim): 73
length of query: 255
length of database: 18,247,518
effective HSP length: 100
effective length of query: 155
effective length of database: 14,460,918
effective search space: 2241442290
effective search space used: 2241442290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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