Guide to the Human Genome
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Name: FBXO39 Sequence: fasta or formatted (442aa) NCBI GI: 23397500
Description:

F-box protein 39

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         17           2
 C cysteine            3.2         14           1
 D aspartate           3.8         17           1
 E glutamate           7.0         31           2
 F phenylalanine       5.4         24           3
 G glycine             2.0          9           1
 H histidine           2.5         11           2
 I isoleucine          5.9         26           2
 K lysine              6.1         27           2
 L leucine            12.9         57           2
 M methionine          2.7         12           2
 N asparagine          5.7         25           3
 P proline             2.3         10           1
 Q glutamine           3.6         16           1
 R arginine            7.9         35           1
 S serine              9.3         41           2
 T threonine           3.8         17           1
 V valine              5.2         23           1
 W tryptophan          2.3         10           2
 Y tyrosine            4.5         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box protein 39 
FBXL3                 0.025   F-box and leucine-rich repeat protein 3 
FBXL21                0.019   F-box and leucine-rich repeat protein 21 
FBXL12                0.016   F-box and leucine-rich repeat protein 12 
FBXL14                0.014   F-box and leucine-rich repeat protein 14 
FBXO33                0.013   F-box protein 33 
FBXL7                 0.013   F-box and leucine-rich repeat protein 7 
FBXW5                 0.011   F-box and WD repeat domain containing 5 
FBXO11                0.011   F-box only protein 11 isoform 1 
FBXO11                0.011   F-box only protein 11 isoform 2 
FBXO11                0.011   F-box only protein 11 isoform 3 
SKP2                  0.009   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.009   S-phase kinase-associated protein 2 isoform 2 
FBXL19                0.008   F-box and leucine-rich repeat protein 19 
FBXL8                 0.008   F-box and leucine-rich repeat protein 8 
FBXO48                0.008   F-box protein 48 
KIAA0319L             0.007   dyslexia susceptibility 2-like 
NLRP13                0.006   NACHT, leucine rich repeat and PYD containing 13 [H...
OMG                   0.006   oligodendrocyte myelin glycoprotein 
FBXL2                 0.006   F-box and leucine-rich repeat protein 2 
FBXL5                 0.005   F-box and leucine-rich repeat protein 5 isoform 2 [H...
FBXL5                 0.005   F-box and leucine-rich repeat protein 5 isoform 1 [H...
FBXL16                0.005   F-box and leucine-rich repeat protein 16 
SH2D3A                0.005   SH2 domain containing 3A 
FBXL6                 0.005   F-box and leucine-rich repeat protein 6 isoform 2 [H...
FBXL6                 0.005   F-box and leucine-rich repeat protein 6 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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