Guide to the Human Genome
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Name: FBXL21 Sequence: fasta or formatted (434aa) NCBI GI: 148922963
Description:

F-box and leucine-rich repeat protein 21

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         22           2
 C cysteine            3.2         14           1
 D aspartate           4.8         21           2
 E glutamate           6.7         29           3
 F phenylalanine       5.1         22           2
 G glycine             2.8         12           1
 H histidine           4.4         19           2
 I isoleucine          5.5         24           2
 K lysine              5.1         22           2
 L leucine            12.4         54           2
 M methionine          1.4          6           1
 N asparagine          4.1         18           2
 P proline             3.9         17           1
 Q glutamine           3.5         15           2
 R arginine            4.1         18           2
 S serine             10.8         47           2
 T threonine           4.4         19           1
 V valine              9.2         40           2
 W tryptophan          1.4          6           1
 Y tyrosine            2.1          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and leucine-rich repeat protein 21 
FBXL3                 0.715   F-box and leucine-rich repeat protein 3 
FBXO33                0.029   F-box protein 33 
SKP2                  0.028   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.028   S-phase kinase-associated protein 2 isoform 2 
FBXL12                0.021   F-box and leucine-rich repeat protein 12 
FBXO39                0.020   F-box protein 39 
FBXL13                0.019   F-box and leucine-rich repeat protein 13 isoform 2 ...
FBXL13                0.019   F-box and leucine-rich repeat protein 13 isoform 1 ...
FBXO11                0.016   F-box only protein 11 isoform 1 
FBXO11                0.016   F-box only protein 11 isoform 2 
FBXO11                0.016   F-box only protein 11 isoform 3 
FBXL8                 0.014   F-box and leucine-rich repeat protein 8 
FBXL14                0.014   F-box and leucine-rich repeat protein 14 
FBXL7                 0.013   F-box and leucine-rich repeat protein 7 
FBXL20                0.012   F-box and leucine-rich repeat protein 20 
FBXL2                 0.012   F-box and leucine-rich repeat protein 2 
CCDC132               0.012   coiled-coil domain containing 132 isoform a 
FBXO31                0.009   F-box protein 31 
FBXW5                 0.009   F-box and WD repeat domain containing 5 
FBXL16                0.009   F-box and leucine-rich repeat protein 16 
NLRP14                0.008   NLR family, pyrin domain containing 14 
FBXO48                0.008   F-box protein 48 
FBXO45                0.008   F-box protein 45 
LRRC29                0.007   F-box and leucine-rich repeat protein 9 
LRRC29                0.007   F-box and leucine-rich repeat protein 9 
CASC5                 0.006   cancer susceptibility candidate 5 isoform 2 
CASC5                 0.006   cancer susceptibility candidate 5 isoform 1 
FAM53A                0.006   dorsal neural-tube nuclear protein 
FBXL19                0.006   F-box and leucine-rich repeat protein 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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