Guide to the Human Genome
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Name: MRPL44 Sequence: fasta or formatted (332aa) NCBI GI: 12597661
Description:

mitochondrial ribosomal protein L44

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         25           2
 C cysteine            1.8          6           1
 D aspartate           2.1          7           1
 E glutamate           9.9         33           3
 F phenylalanine       5.1         17           2
 G glycine             5.7         19           2
 H histidine           1.2          4           1
 I isoleucine          3.3         11           2
 K lysine              6.3         21           2
 L leucine            13.0         43           2
 M methionine          1.5          5           1
 N asparagine          3.3         11           1
 P proline             6.3         21           4
 Q glutamine           5.4         18           2
 R arginine            6.9         23           2
 S serine              5.4         18           2
 T threonine           5.4         18           2
 V valine              6.6         22           2
 W tryptophan          0.9          3           1
 Y tyrosine            2.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein L44 
RNASEN                0.016   ribonuclease III, nuclear isoform 2 
RNASEN                0.016   ribonuclease III, nuclear isoform 1 
SMARCA4               0.013   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.013   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.013   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.013   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA2               0.013   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.013   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA4               0.011   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.011   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.011   SWI/SNF-related matrix-associated actin-dependent re...
NCAPG2                0.011   leucine zipper protein 5 
CCDC30                0.006   coiled-coil domain containing 30 
FNTA                  0.006   farnesyltransferase, CAAX box, alpha isoform c [Homo...
FNTA                  0.006   farnesyltransferase, CAAX box, alpha isoform b [Homo...
FNTA                  0.006   farnesyltransferase, CAAX box, alpha isoform a 
ABCF2                 0.006   ATP-binding cassette, sub-family F, member 2 isoform...
ABCF2                 0.006   ATP-binding cassette, sub-family F, member 2 isoform...
ENOX1                 0.005   ecto-NOX disulfide-thiol exchanger 1 
ENOX1                 0.005   ecto-NOX disulfide-thiol exchanger 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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