Guide to the Human Genome
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Name: PCK2 Sequence: fasta or formatted (441aa) NCBI GI: 66346723
Description:

mitochondrial phosphoenolpyruvate carboxykinase 2 isoform 2 precursor

Referenced in:

Glycolysis
Mitochondria

Other entries for this name:
alt prot [640aa] mitochondrial phosphoenolpyruvate carboxykinase 2 isoform 1 precu...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         32           3
 C cysteine            2.5         11           1
 D aspartate           4.1         18           2
 E glutamate           4.3         19           1
 F phenylalanine       2.9         13           2
 G glycine            11.3         50           2
 H histidine           1.4          6           1
 I isoleucine          4.5         20           2
 K lysine              3.4         15           2
 L leucine             9.5         42           2
 M methionine          3.2         14           2
 N asparagine          3.2         14           2
 P proline             8.6         38           2
 Q glutamine           4.5         20           2
 R arginine            5.9         26           1
 S serine              6.3         28           1
 T threonine           6.6         29           2
 V valine              6.3         28           2
 W tryptophan          2.5         11           1
 Y tyrosine            1.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial phosphoenolpyruvate carboxykinase 2 is... 
PCK2                  0.934   mitochondrial phosphoenolpyruvate carboxykinase 2 is...
PCK1                  0.645   cytosolic phosphoenolpyruvate carboxykinase 1 [Homo...
HSPG2                 0.011   heparan sulfate proteoglycan 2 
COL16A1               0.011   alpha 1 type XVI collagen precursor 
DNAH2                 0.007   dynein heavy chain domain 3 
USP27X                0.006   X-linked ubiquitin thioesterase 27 
COL4A5                0.006   type IV collagen alpha 5 isoform 2 precursor 
COL4A5                0.006   type IV collagen alpha 5 isoform 1 precursor 
COL4A5                0.006   type IV collagen alpha 5 isoform 3 precursor 
ELK1                  0.006   ELK1 protein 
ELK1                  0.006   ELK1 protein 
COL19A1               0.006   alpha 1 type XIX collagen precursor 
COL13A1               0.006   alpha 1 type XIII collagen isoform 20 
COL13A1               0.006   alpha 1 type XIII collagen isoform 19 
COL13A1               0.006   alpha 1 type XIII collagen isoform 18 
COL13A1               0.006   alpha 1 type XIII collagen isoform 17 
COL13A1               0.006   alpha 1 type XIII collagen isoform 16 
COL13A1               0.006   alpha 1 type XIII collagen isoform 15 
COL13A1               0.006   alpha 1 type XIII collagen isoform 14 
COL13A1               0.006   alpha 1 type XIII collagen isoform 13 
COL13A1               0.006   alpha 1 type XIII collagen isoform 12 
COL13A1               0.006   alpha 1 type XIII collagen isoform 11 
COL13A1               0.006   alpha 1 type XIII collagen isoform 10 
COL13A1               0.006   alpha 1 type XIII collagen isoform 9 
COL13A1               0.006   alpha 1 type XIII collagen isoform 7 
COL13A1               0.006   alpha 1 type XIII collagen isoform 6 
COL13A1               0.006   alpha 1 type XIII collagen isoform 5 
COL13A1               0.006   alpha 1 type XIII collagen isoform 4 
COL13A1               0.006   alpha 1 type XIII collagen isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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