WHSC1 34512

Name: WHSC1	Sequence: fasta or formatted (629aa)		NCBI GI: 6594683
Description: Wolf-Hirschhorn syndrome candidate 1 protein isoform 4		Referenced in: Additional Brain Proteins Histones, Related Proteins, and Modifying Enzymes PHD Finger Proteins Small RNAs in RNA Processing
Other entries for this name: alt prot [1365aa] Wolf-Hirschhorn syndrome candidate 1 protein isoform 1 alt prot [1365aa] Wolf-Hirschhorn syndrome candidate 1 protein isoform 1 alt prot [1365aa] Wolf-Hirschhorn syndrome candidate 1 protein isoform 1 alt prot [647aa] Wolf-Hirschhorn syndrome candidate 1 protein isoform 3 alt prot [1365aa] Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 59 2 C cysteine 1.7 11 1 D aspartate 4.3 27 1 E glutamate 8.7 55 2 F phenylalanine 2.9 18 2 G glycine 5.6 35 1 H histidine 1.7 11 1 I isoleucine 3.5 22 1 K lysine 11.0 69 2 L leucine 7.2 45 2 M methionine 1.9 12 1 N asparagine 3.3 21 1 P proline 5.7 36 2 Q glutamine 4.5 28 1 R arginine 5.7 36 4 S serine 11.1 70 3 T threonine 4.5 28 2 V valine 4.9 31 2 W tryptophan 1.0 6 2 Y tyrosine 1.4 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Wolf-Hirschhorn syndrome candidate 1 protein isoform ... WHSC1 0.998 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.998 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.998 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1 0.998 Wolf-Hirschhorn syndrome candidate 1 protein isofor... WHSC1 0.998 Wolf-Hirschhorn syndrome candidate 1 protein isoform... WHSC1L1 0.161 WHSC1L1 protein isoform long WHSC1L1 0.145 WHSC1L1 protein isoform short NSD1 0.061 nuclear receptor binding SET domain protein 1 isofor... NSD1 0.061 nuclear receptor binding SET domain protein 1 isofor... MSH6 0.039 mutS homolog 6 ZCWPW1 0.033 zinc finger, CW type with PWWP domain 1 HDGF 0.021 hepatoma-derived growth factor isoform a HMGB2 0.016 high-mobility group box 2 HMGB2 0.016 high-mobility group box 2 HMGB2 0.016 high-mobility group box 2 CALD1 0.016 caldesmon 1 isoform 1 DNMT3B 0.014 DNA cytosine-5 methyltransferase 3 beta isoform 6 [H... DNMT3B 0.014 DNA cytosine-5 methyltransferase 3 beta isoform 3 [H... DNMT3B 0.014 DNA cytosine-5 methyltransferase 3 beta isoform 2 [H... DNMT3B 0.014 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho... UBTF 0.014 upstream binding transcription factor, RNA polymera... UBTF 0.014 upstream binding transcription factor, RNA polymera... UBTF 0.014 upstream binding transcription factor, RNA polymerase... PWWP2B 0.014 PWWP domain containing 2 isoform 1 HMG20B 0.014 high-mobility group 20B N-PAC 0.014 cytokine-like nuclear factor n-pac HMGXB4 0.013 high-mobility group protein 2-like 1 SP100 0.013 nuclear antigen Sp100 isoform 2 BBX 0.013 HMG-BOX transcription factor BBX isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.