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Search of human proteins with 63079709
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|63079709 apolipoprotein AV [Homo sapiens]
(366 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|63079709 apolipoprotein AV [Homo sapiens] 727 0.0
gi|71773110 apolipoprotein A-IV precursor [Homo sapiens] 125 5e-29
gi|4557321 apolipoprotein A-I preproprotein [Homo sapiens] 70 2e-12
gi|4557325 apolipoprotein E precursor [Homo sapiens] 51 1e-06
gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-l... 44 2e-04
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l... 44 2e-04
gi|16262452 cingulin [Homo sapiens] 44 3e-04
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 43 4e-04
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 43 4e-04
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 43 4e-04
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein... 43 4e-04
gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein... 43 4e-04
gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein... 43 4e-04
gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-l... 43 4e-04
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l... 43 4e-04
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap... 43 5e-04
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi... 43 5e-04
gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-l... 42 0.001
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l... 42 0.001
gi|21735548 centrosomal protein 2 [Homo sapiens] 40 0.004
gi|38044112 restin isoform b [Homo sapiens] 40 0.004
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 40 0.004
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 40 0.004
gi|126723390 ankyrin repeat domain 24 [Homo sapiens] 39 0.006
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 39 0.007
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 39 0.007
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 39 0.007
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 39 0.007
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 39 0.007
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 39 0.007
>gi|63079709 apolipoprotein AV [Homo sapiens]
Length = 366
Score = 727 bits (1877), Expect = 0.0
Identities = 366/366 (100%), Positives = 366/366 (100%)
Query: 1 MASMAAVLTWALALLSAFSATQARKGFWDYFSQTSGDKGRVEQIHQQKMAREPATLKDSL 60
MASMAAVLTWALALLSAFSATQARKGFWDYFSQTSGDKGRVEQIHQQKMAREPATLKDSL
Sbjct: 1 MASMAAVLTWALALLSAFSATQARKGFWDYFSQTSGDKGRVEQIHQQKMAREPATLKDSL 60
Query: 61 EQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKARLQPYMAEAHELVGW 120
EQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKARLQPYMAEAHELVGW
Sbjct: 61 EQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKARLQPYMAEAHELVGW 120
Query: 121 NLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQLLGGVDEAWALLQGLQSRV 180
NLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQLLGGVDEAWALLQGLQSRV
Sbjct: 121 NLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQLLGGVDEAWALLQGLQSRV 180
Query: 181 VHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAK 240
VHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAK
Sbjct: 181 VHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAK 240
Query: 241 ALHARIQQNLDQLREELSRAFAGTGTEEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFT 300
ALHARIQQNLDQLREELSRAFAGTGTEEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFT
Sbjct: 241 ALHARIQQNLDQLREELSRAFAGTGTEEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFT 300
Query: 301 RAIDQETEEVQQQLAPPPPGHSAFAPEFQQTDSGKVLSKLQARLDDLWEDITHSLHDQGH 360
RAIDQETEEVQQQLAPPPPGHSAFAPEFQQTDSGKVLSKLQARLDDLWEDITHSLHDQGH
Sbjct: 301 RAIDQETEEVQQQLAPPPPGHSAFAPEFQQTDSGKVLSKLQARLDDLWEDITHSLHDQGH 360
Query: 361 SHLGDP 366
SHLGDP
Sbjct: 361 SHLGDP 366
>gi|71773110 apolipoprotein A-IV precursor [Homo sapiens]
Length = 396
Score = 125 bits (315), Expect = 5e-29
Identities = 96/338 (28%), Positives = 168/338 (49%), Gaps = 18/338 (5%)
Query: 5 AAVLTWALALLSA----FSATQARKGFWDYFSQTSGD-KGRVEQIHQQKMARE-PATLKD 58
A VLT AL ++ SA Q WDYFSQ S + K VE + + ++ ++ A +D
Sbjct: 5 AVVLTLALVAVAGARAEVSADQVATVMWDYFSQLSNNAKEAVEHLQKSELTQQLNALFQD 64
Query: 59 SLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKARLQPYMAEAHELV 118
L + +KL P + RL +D ++ ++ +ELEE++ARL P+ E + +
Sbjct: 65 KLGEVNTYAGDLQKKLVPFATELHERLAKDSEKLKEEIGKELEELRARLLPHANEVSQKI 124
Query: 119 GWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQLLGGVDEAWALLQ---- 174
G NL L+Q+L+PY L QV+ + ++L+ QL + + L D A L+
Sbjct: 125 GDNLRELQQRLEPYADQLRTQVSTQAEQLRRQLTPYAQRMERVLRENADSLQASLRPHAD 184
Query: 175 GLQSRVVHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRK 234
L++++ + K PYA+ I + V+EL RS+AP+A + +L+ ++ L+ +
Sbjct: 185 ELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSLAPYAQDTQEKLNHQLEGLTFQ 244
Query: 235 LTLKAKALHARIQQNLDQLREELSRAFAGT-----GTEEGAGPDPQMLSEEVRQRLQAFR 289
+ A+ L ARI + ++LR+ L+ G EG L + Q+++ FR
Sbjct: 245 MKKNAEELKARISASAEELRQRLAPLAEDVRGNLRGNTEGLQKSLAELGGHLDQQVEEFR 304
Query: 290 QDTYLQIAAFTRAIDQETEEVQQQLAP---PPPGHSAF 324
+ F +A+ Q+ E+++Q+L P GH +F
Sbjct: 305 RRVEPYGENFNKALVQQMEQLRQKLGPHAGDVEGHLSF 342
Score = 34.7 bits (78), Expect = 0.14
Identities = 20/87 (22%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 72 EKLRPLSGSEAPRLPQDPVGMRRQLQE-------ELEEVKARLQPYMAEAHELVGWNLEG 124
++L PL+ L + G+++ L E ++EE + R++PY ++ + +E
Sbjct: 265 QRLAPLAEDVRGNLRGNTEGLQKSLAELGGHLDQQVEEFRRRVEPYGENFNKALVQQMEQ 324
Query: 125 LRQQLKPYTMDLMEQVALRVQELQEQL 151
LRQ+L P+ D+ ++ ++L++++
Sbjct: 325 LRQKLGPHAGDVEGHLSFLEKDLRDKV 351
>gi|4557321 apolipoprotein A-I preproprotein [Homo sapiens]
Length = 267
Score = 70.5 bits (171), Expect = 2e-12
Identities = 60/270 (22%), Positives = 120/270 (44%), Gaps = 23/270 (8%)
Query: 5 AAVLTWALALLSAFSAT------QARKGFWD-------YFSQTSGDKGR--VEQIHQQKM 49
AAVLT A+ L+ A + + WD + D GR V Q +
Sbjct: 3 AAVLTLAVLFLTGSQARHFWQQDEPPQSPWDRVKDLATVYVDVLKDSGRDYVSQFEGSAL 62
Query: 50 ARE-PATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKARLQ 108
++ L D+ + + +K E+L P++ L ++ G+R+++ ++LEEVKA++Q
Sbjct: 63 GKQLNLKLLDNWDSVTSTFSKLREQLGPVTQEFWDNLEKETEGLRQEMSKDLEEVKAKVQ 122
Query: 109 PYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQLLGGVDE 168
PY+ + + +E RQ+++P +L E ++ ELQE+L +GE+ + D
Sbjct: 123 PYLDDFQKKWQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMR-------DR 175
Query: 169 AWALLQGLQSRVVHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPHAPASPARLSRCV 228
A A + L++ + ++ ++ E+L G + E H H + +
Sbjct: 176 ARAHVDALRTHLAPYSDELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPAL 235
Query: 229 QVLSRKLTLKAKALHARIQQNLDQLREELS 258
+ L + L ++ L++ ++L+
Sbjct: 236 EDLRQGLLPVLESFKVSFLSALEEYTKKLN 265
>gi|4557325 apolipoprotein E precursor [Homo sapiens]
Length = 317
Score = 51.2 bits (121), Expect = 1e-06
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 17/250 (6%)
Query: 27 FWDYFS--QTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPR 84
FWDY QT ++ + E + Q A + +++++ ++ E+L P++ R
Sbjct: 51 FWDYLRWVQTLSEQVQEELLSSQVTQELRALMDETMKELKAYKSELEEQLTPVAEETRAR 110
Query: 85 LPQDPVGMRRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRV 144
L ++ + +L ++E+V RL Y E ++G + E LR +L + L +++
Sbjct: 111 LSKELQAAQARLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDA 170
Query: 145 QELQEQLRVVGEDTKAQLLGGVDEAWALLQGL--QSRVVHHT------GRFKELFHPYAE 196
+LQ++L V + G+ L L Q RV T +E + E
Sbjct: 171 DDLQKRLAVYQAGAREGAERGLSAIRERLGPLVEQGRVRAATVGSLAGQPLQERAQAWGE 230
Query: 197 SL---VSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQL 253
L + +G ++ V A+L Q ++ L+A+A AR++ + L
Sbjct: 231 RLRARMEEMGSRTRDRLDEVKEQVAEVRAKLEEQAQ----QIRLQAEAFQARLKSWFEPL 286
Query: 254 REELSRAFAG 263
E++ R +AG
Sbjct: 287 VEDMQRQWAG 296
Score = 44.7 bits (104), Expect = 1e-04
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 23/196 (11%)
Query: 127 QQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQLLGGVDEAWALL----QGLQSRVVH 182
Q+L+ + M+++ EL+EQL V E+T+A+L + A A L + + R+V
Sbjct: 76 QELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLGADMEDVCGRLVQ 135
Query: 183 HTGRFKELFHPYAESLVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKAL 242
+ G + + +G+ +EL +A H RL R L ++L +
Sbjct: 136 YRGEVQAM-----------LGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVYQAGA 184
Query: 243 HARIQQNLDQLREELSRAFAGTGTEEG---AGPDPQMLSEEVRQRLQAFRQDTYLQIAAF 299
++ L +RE L G E+G A + + +++R QA+ + ++
Sbjct: 185 REGAERGLSAIRERL-----GPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEM 239
Query: 300 TRAIDQETEEVQQQLA 315
+EV++Q+A
Sbjct: 240 GSRTRDRLDEVKEQVA 255
>gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 601
Score = 43.9 bits (102), Expect = 2e-04
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 29 DYFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQD 88
+Y G++ R +Q +KM++E TLK +QD+ + K L L A LP +
Sbjct: 239 EYSEHLKGERARWQQ-RMRKMSQEICTLKKEKQQDMRRVEKLERSLSKLKNQMAEPLPPE 297
Query: 89 PVGM-----RRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALR 143
P + + L++ELE V LQ + + + L Q+ + + E++ +
Sbjct: 298 PPAVPSEVELQHLRKELERVAGELQAQVKK-----NQRISLLNQRQEERIQEQEERLRKQ 352
Query: 144 VQELQEQLRVVGEDTKAQ 161
+ +QEQ + + + K Q
Sbjct: 353 EERIQEQHKSLQQLAKPQ 370
>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 630
Score = 43.9 bits (102), Expect = 2e-04
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 29 DYFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQD 88
+Y G++ R +Q +KM++E TLK +QD+ + K L L A LP +
Sbjct: 240 EYSEHLKGERARWQQ-RMRKMSQEICTLKKEKQQDMRRVEKLERSLSKLKNQMAEPLPPE 298
Query: 89 PVGM-----RRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALR 143
P + + L++ELE V LQ + + + L Q+ + + E++ +
Sbjct: 299 PPAVPSEVELQHLRKELERVAGELQAQVKK-----NQRISLLNQRQEERIQEQEERLRKQ 353
Query: 144 VQELQEQLRVVGEDTKAQ 161
+ +QEQ + + + K Q
Sbjct: 354 EERIQEQHKSLQQLAKPQ 371
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 43.5 bits (101), Expect = 3e-04
Identities = 81/356 (22%), Positives = 152/356 (42%), Gaps = 49/356 (13%)
Query: 21 TQARKGFWDYFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGS 80
T G W Q + + R + ++ E +++ L + + + + LE+ R +G
Sbjct: 564 TSEETGHWQSMFQKNKEDLRATKQELLQLRMEKEEMEEELGEKIEVLQRELEQARASAGD 623
Query: 81 EAPRLPQDPVGMRRQL---QEELEEVKARLQPYMAEAHELVGWNLEG-LRQQLKPYTMDL 136
+ ++++L QEEL+E++A Q + E+ G + + L +QL ++
Sbjct: 624 T-----RQVEVLKKELLRTQEELKELQAERQ-----SQEVAGRHRDRELEKQLAVLRVEA 673
Query: 137 -----MEQVALRVQELQEQLRVVGED-TKAQLLGGVDEAWALLQGLQSRVVHHTGRFKEL 190
+E+ L++Q+ +QLR E+ +KA++ V EA A + G + V T R +
Sbjct: 674 DRGRELEEQNLQLQKTLQQLRQDCEEASKAKM---VAEAEATVLGQRRAAVETTLRETQE 730
Query: 191 FHPYAESLVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQN- 249
+ + G+ + ++E R + A ARL +Q L + +AL+A ++
Sbjct: 731 ENDEFRRRILGLEQQLKET-RGLVDGGEAVEARLRDKLQRLEAEKQQLEEALNASQEEEG 789
Query: 250 --------LDQLREELSRAFAGTGTEEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFTR 301
L+ EE R A G E+ + L EE +QR R L+ R
Sbjct: 790 SLAAAKRALEARLEEAQRGLARLGQEQQTLN--RALEEEGKQREVLRRGKAELEEQK--R 845
Query: 302 AIDQETEEVQQQLAPPPPGHSAFAPEFQQTDSGKVLSKLQARLDDLWEDITHSLHD 357
+D+ + + ++L E DS + L +LQA+L+D E + D
Sbjct: 846 LLDRTVDRLNKEL------------EKIGEDSKQALQQLQAQLEDYKEKARREVAD 889
Score = 28.9 bits (63), Expect = 7.6
Identities = 28/132 (21%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 57 KDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKARLQPYMAEAHE 116
K L++ ++ +NK LEK+ S +L + + + E+ + + + + + +EA +
Sbjct: 844 KRLLDRTVDRLNKELEKIGEDSKQALQQLQAQLEDYKEKARREVADAQRQAKDWASEAEK 903
Query: 117 LVGW------NLEGLRQQLKPYTMDL------MEQVALRVQELQEQL--RVVGEDTKAQL 162
G ++ LRQ L+ + E +A R+Q L+++ + +D +A+
Sbjct: 904 TSGGLSRLQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKKRSQDDRARQ 963
Query: 163 LGGVDEAWALLQ 174
L G++E + L+
Sbjct: 964 LKGLEEKVSRLE 975
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 43.1 bits (100), Expect = 4e-04
Identities = 87/340 (25%), Positives = 136/340 (40%), Gaps = 52/340 (15%)
Query: 39 GRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQE 98
G EQ+ ++ ARE A ++L L + R EA L RR+
Sbjct: 1372 GLREQLEEEAAARERAG------RELQTAQAQLSEWRRRQEEEAGALEAGEEA-RRRAAR 1424
Query: 99 ELEEVKARLQPYMAEAHELVGWNLEG---LRQQLKPYTMDLMEQVAL------------- 142
E E + RL AE E V G L+Q+L TMDL +Q L
Sbjct: 1425 EAEALTQRL----AEKTETVDRLERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQ 1480
Query: 143 -RVQELQEQLRVVGEDTKAQLLGGVDEAWAL--LQGLQSR--VVHHTGRFKELFHPYAES 197
+E LR V E +A+ G EA AL + L+ R E+
Sbjct: 1481 LLAEEKAAVLRAVEERERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEA 1540
Query: 198 LVSG---IGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLR 254
L+S +G+ V EL R+ A + L V L +LT A+ R++ + L+
Sbjct: 1541 LLSSKDDVGKSVHELERACRV-AEQAANDLRAQVTELEDELTA-AEDAKLRLEVTVQALK 1598
Query: 255 EELSRAFAG---TGTEEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQ 311
+ R G G E Q+ EV + + R+ L +AA + ++ E EE++
Sbjct: 1599 TQHERDLQGRDEAGEERRRQLAKQLRDAEVERDEE--RKQRTLAVAA-RKKLEGELEELK 1655
Query: 312 QQLAPPPPGHSAFAPEFQQTDSGKVLSKLQARLDDLWEDI 351
Q+A G + ++ K L K+QA++ +LW ++
Sbjct: 1656 AQMASAGQG---------KEEAVKQLRKMQAQMKELWREV 1686
Score = 32.3 bits (72), Expect = 0.69
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 52/276 (18%)
Query: 40 RVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGM---RRQL 96
R Q +++ RE + S E+ + + ++L+ L +E RL ++ RRQ
Sbjct: 1673 RKMQAQMKELWREVEETRTSREEIFSQNRESEKRLKGLE-AEVLRLQEELAASDRARRQA 1731
Query: 97 QEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGE 156
Q++ +E+ A E+ NL K ++ Q+ R+ +L+E+L E
Sbjct: 1732 QQDRDEM----------ADEVANGNLS------KAAILEEKRQLEGRLGQLEEELEE--E 1773
Query: 157 DTKAQLLGGVDEAWALLQGLQSRVVHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPH 216
+ ++LL D LL ++S + + F AES + R +QEL +
Sbjct: 1774 QSNSELLN--DRYRKLLLQVESLTTELSA--ERSFSAKAESGRQQLERQIQELRGRLGEE 1829
Query: 217 APASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGPDPQM 276
+ AR K+T+ AL +++ Q +QL +E T E ++
Sbjct: 1830 DAGARAR---------HKMTI--AALESKLAQAEEQLEQE---------TRE------RI 1863
Query: 277 LSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQ 312
LS ++ +R + ++ LQ+ R DQ +++++
Sbjct: 1864 LSGKLVRRAEKRLKEVVLQVEEERRVADQLRDQLEK 1899
Score = 32.0 bits (71), Expect = 0.90
Identities = 69/324 (21%), Positives = 129/324 (39%), Gaps = 51/324 (15%)
Query: 48 KMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKARL 107
K+++E L+D L + + + EK++ L+ +R + + + +++ RL
Sbjct: 1021 KLSKERKLLEDRLAEFSSQAAEEEEKVKSLNK------------LRLKYEATIADMEDRL 1068
Query: 108 QPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVA---LRVQELQEQLRVVGEDTKAQLLG 164
+ EL E L+++L + +L EQ+ R +EL+ QL E+ +A L
Sbjct: 1069 RKEEKGRQEL-----EKLKRRLDGESSELQEQMVEQQQRAEELRAQLGRKEEELQAALAR 1123
Query: 165 GVDEAWALLQGLQS--------RVVHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPH 216
DE A Q L+S + + AE +G ++ L +
Sbjct: 1124 AEDEGGARAQLLKSLREAQAALAEAQEDLESERVARTKAEKQRRDLGEELEALRGELEDT 1183
Query: 217 APASPA----RLSRCVQVLSRKLTLK---------AKALHARIQQNLDQLREELSRAFAG 263
++ A R R +V K TL+ + L R Q L +L E+L +A G
Sbjct: 1184 LDSTNAQQELRSKREQEVTELKKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRG 1243
Query: 264 TGTEEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQLAPPPPGHSA 323
G E + E+R L + Q + R ++ + +EVQ + A
Sbjct: 1244 KGAWEKTRLALEAEVSELRAELSSL-QTARQEGEQRRRRLELQLQEVQGR---------A 1293
Query: 324 FAPEFQQTDSGKVLSKLQARLDDL 347
E + ++ + L + QA L+++
Sbjct: 1294 GDGERARAEAAEKLQRAQAELENV 1317
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 43.1 bits (100), Expect = 4e-04
Identities = 87/340 (25%), Positives = 136/340 (40%), Gaps = 52/340 (15%)
Query: 39 GRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQE 98
G EQ+ ++ ARE A ++L L + R EA L RR+
Sbjct: 1364 GLREQLEEEAAARERAG------RELQTAQAQLSEWRRRQEEEAGALEAGEEA-RRRAAR 1416
Query: 99 ELEEVKARLQPYMAEAHELVGWNLEG---LRQQLKPYTMDLMEQVAL------------- 142
E E + RL AE E V G L+Q+L TMDL +Q L
Sbjct: 1417 EAEALTQRL----AEKTETVDRLERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQ 1472
Query: 143 -RVQELQEQLRVVGEDTKAQLLGGVDEAWAL--LQGLQSR--VVHHTGRFKELFHPYAES 197
+E LR V E +A+ G EA AL + L+ R E+
Sbjct: 1473 LLAEEKAAVLRAVEERERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEA 1532
Query: 198 LVSG---IGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLR 254
L+S +G+ V EL R+ A + L V L +LT A+ R++ + L+
Sbjct: 1533 LLSSKDDVGKSVHELERACRV-AEQAANDLRAQVTELEDELTA-AEDAKLRLEVTVQALK 1590
Query: 255 EELSRAFAG---TGTEEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQ 311
+ R G G E Q+ EV + + R+ L +AA + ++ E EE++
Sbjct: 1591 TQHERDLQGRDEAGEERRRQLAKQLRDAEVERDEE--RKQRTLAVAA-RKKLEGELEELK 1647
Query: 312 QQLAPPPPGHSAFAPEFQQTDSGKVLSKLQARLDDLWEDI 351
Q+A G + ++ K L K+QA++ +LW ++
Sbjct: 1648 AQMASAGQG---------KEEAVKQLRKMQAQMKELWREV 1678
Score = 32.3 bits (72), Expect = 0.69
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 52/276 (18%)
Query: 40 RVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGM---RRQL 96
R Q +++ RE + S E+ + + ++L+ L +E RL ++ RRQ
Sbjct: 1665 RKMQAQMKELWREVEETRTSREEIFSQNRESEKRLKGLE-AEVLRLQEELAASDRARRQA 1723
Query: 97 QEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGE 156
Q++ +E+ A E+ NL K ++ Q+ R+ +L+E+L E
Sbjct: 1724 QQDRDEM----------ADEVANGNLS------KAAILEEKRQLEGRLGQLEEELEE--E 1765
Query: 157 DTKAQLLGGVDEAWALLQGLQSRVVHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPH 216
+ ++LL D LL ++S + + F AES + R +QEL +
Sbjct: 1766 QSNSELLN--DRYRKLLLQVESLTTELSA--ERSFSAKAESGRQQLERQIQELRGRLGEE 1821
Query: 217 APASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGPDPQM 276
+ AR K+T+ AL +++ Q +QL +E T E ++
Sbjct: 1822 DAGARAR---------HKMTI--AALESKLAQAEEQLEQE---------TRE------RI 1855
Query: 277 LSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQ 312
LS ++ +R + ++ LQ+ R DQ +++++
Sbjct: 1856 LSGKLVRRAEKRLKEVVLQVEEERRVADQLRDQLEK 1891
Score = 32.0 bits (71), Expect = 0.90
Identities = 69/324 (21%), Positives = 129/324 (39%), Gaps = 51/324 (15%)
Query: 48 KMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKARL 107
K+++E L+D L + + + EK++ L+ +R + + + +++ RL
Sbjct: 1013 KLSKERKLLEDRLAEFSSQAAEEEEKVKSLNK------------LRLKYEATIADMEDRL 1060
Query: 108 QPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVA---LRVQELQEQLRVVGEDTKAQLLG 164
+ EL E L+++L + +L EQ+ R +EL+ QL E+ +A L
Sbjct: 1061 RKEEKGRQEL-----EKLKRRLDGESSELQEQMVEQQQRAEELRAQLGRKEEELQAALAR 1115
Query: 165 GVDEAWALLQGLQS--------RVVHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPH 216
DE A Q L+S + + AE +G ++ L +
Sbjct: 1116 AEDEGGARAQLLKSLREAQAALAEAQEDLESERVARTKAEKQRRDLGEELEALRGELEDT 1175
Query: 217 APASPA----RLSRCVQVLSRKLTLK---------AKALHARIQQNLDQLREELSRAFAG 263
++ A R R +V K TL+ + L R Q L +L E+L +A G
Sbjct: 1176 LDSTNAQQELRSKREQEVTELKKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRG 1235
Query: 264 TGTEEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQLAPPPPGHSA 323
G E + E+R L + Q + R ++ + +EVQ + A
Sbjct: 1236 KGAWEKTRLALEAEVSELRAELSSL-QTARQEGEQRRRRLELQLQEVQGR---------A 1285
Query: 324 FAPEFQQTDSGKVLSKLQARLDDL 347
E + ++ + L + QA L+++
Sbjct: 1286 GDGERARAEAAEKLQRAQAELENV 1309
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 43.1 bits (100), Expect = 4e-04
Identities = 87/340 (25%), Positives = 136/340 (40%), Gaps = 52/340 (15%)
Query: 39 GRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQE 98
G EQ+ ++ ARE A ++L L + R EA L RR+
Sbjct: 1405 GLREQLEEEAAARERAG------RELQTAQAQLSEWRRRQEEEAGALEAGEEA-RRRAAR 1457
Query: 99 ELEEVKARLQPYMAEAHELVGWNLEG---LRQQLKPYTMDLMEQVAL------------- 142
E E + RL AE E V G L+Q+L TMDL +Q L
Sbjct: 1458 EAEALTQRL----AEKTETVDRLERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQ 1513
Query: 143 -RVQELQEQLRVVGEDTKAQLLGGVDEAWAL--LQGLQSR--VVHHTGRFKELFHPYAES 197
+E LR V E +A+ G EA AL + L+ R E+
Sbjct: 1514 LLAEEKAAVLRAVEERERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEA 1573
Query: 198 LVSG---IGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLR 254
L+S +G+ V EL R+ A + L V L +LT A+ R++ + L+
Sbjct: 1574 LLSSKDDVGKSVHELERACRV-AEQAANDLRAQVTELEDELTA-AEDAKLRLEVTVQALK 1631
Query: 255 EELSRAFAG---TGTEEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQ 311
+ R G G E Q+ EV + + R+ L +AA + ++ E EE++
Sbjct: 1632 TQHERDLQGRDEAGEERRRQLAKQLRDAEVERDEE--RKQRTLAVAA-RKKLEGELEELK 1688
Query: 312 QQLAPPPPGHSAFAPEFQQTDSGKVLSKLQARLDDLWEDI 351
Q+A G + ++ K L K+QA++ +LW ++
Sbjct: 1689 AQMASAGQG---------KEEAVKQLRKMQAQMKELWREV 1719
Score = 32.3 bits (72), Expect = 0.69
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 52/276 (18%)
Query: 40 RVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGM---RRQL 96
R Q +++ RE + S E+ + + ++L+ L +E RL ++ RRQ
Sbjct: 1706 RKMQAQMKELWREVEETRTSREEIFSQNRESEKRLKGLE-AEVLRLQEELAASDRARRQA 1764
Query: 97 QEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGE 156
Q++ +E+ A E+ NL K ++ Q+ R+ +L+E+L E
Sbjct: 1765 QQDRDEM----------ADEVANGNLS------KAAILEEKRQLEGRLGQLEEELEE--E 1806
Query: 157 DTKAQLLGGVDEAWALLQGLQSRVVHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPH 216
+ ++LL D LL ++S + + F AES + R +QEL +
Sbjct: 1807 QSNSELLN--DRYRKLLLQVESLTTELSA--ERSFSAKAESGRQQLERQIQELRGRLGEE 1862
Query: 217 APASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGPDPQM 276
+ AR K+T+ AL +++ Q +QL +E T E ++
Sbjct: 1863 DAGARAR---------HKMTI--AALESKLAQAEEQLEQE---------TRE------RI 1896
Query: 277 LSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQ 312
LS ++ +R + ++ LQ+ R DQ +++++
Sbjct: 1897 LSGKLVRRAEKRLKEVVLQVEEERRVADQLRDQLEK 1932
Score = 32.0 bits (71), Expect = 0.90
Identities = 69/324 (21%), Positives = 129/324 (39%), Gaps = 51/324 (15%)
Query: 48 KMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKARL 107
K+++E L+D L + + + EK++ L+ +R + + + +++ RL
Sbjct: 1054 KLSKERKLLEDRLAEFSSQAAEEEEKVKSLNK------------LRLKYEATIADMEDRL 1101
Query: 108 QPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVA---LRVQELQEQLRVVGEDTKAQLLG 164
+ EL E L+++L + +L EQ+ R +EL+ QL E+ +A L
Sbjct: 1102 RKEEKGRQEL-----EKLKRRLDGESSELQEQMVEQQQRAEELRAQLGRKEEELQAALAR 1156
Query: 165 GVDEAWALLQGLQS--------RVVHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPH 216
DE A Q L+S + + AE +G ++ L +
Sbjct: 1157 AEDEGGARAQLLKSLREAQAALAEAQEDLESERVARTKAEKQRRDLGEELEALRGELEDT 1216
Query: 217 APASPA----RLSRCVQVLSRKLTLK---------AKALHARIQQNLDQLREELSRAFAG 263
++ A R R +V K TL+ + L R Q L +L E+L +A G
Sbjct: 1217 LDSTNAQQELRSKREQEVTELKKTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRG 1276
Query: 264 TGTEEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQLAPPPPGHSA 323
G E + E+R L + Q + R ++ + +EVQ + A
Sbjct: 1277 KGAWEKTRLALEAEVSELRAELSSL-QTARQEGEQRRRRLELQLQEVQGR---------A 1326
Query: 324 FAPEFQQTDSGKVLSKLQARLDDL 347
E + ++ + L + QA L+++
Sbjct: 1327 GDGERARAEAAEKLQRAQAELENV 1350
>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
[Homo sapiens]
Length = 580
Score = 43.1 bits (100), Expect = 4e-04
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 29 DYFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQD 88
+Y G++ R +Q +KM++E TLK +QD+ + K L L A LP +
Sbjct: 211 EYSEHLKGERARWQQ-RMRKMSQEICTLKKEKQQDMRRVEKLERSLSKLKNQMAEPLPPE 269
Query: 89 PVGM-----RRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALR 143
P + + L++ELE V LQ + + L Q+ + + E++ +
Sbjct: 270 PPAVPSEVELQHLRKELERVAGELQAQVKN-----NQRISLLNQRQEERIREQEERLRKQ 324
Query: 144 VQELQEQLRVVGEDTKAQ 161
+ +QEQ + + + K Q
Sbjct: 325 EERIQEQHKSLQQLAKPQ 342
>gi|169208014 PREDICTED: Golgin subfamily A member 8-like protein 3
isoform 2 [Homo sapiens]
Length = 602
Score = 43.1 bits (100), Expect = 4e-04
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 29 DYFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQD 88
+Y G++ R +Q +KM++E TLK +QD+ + K L L A LP +
Sbjct: 239 EYSEHLKGERARWQQ-RMRKMSQEICTLKKEKQQDMRRVEKLERSLSKLKNQMAEPLPPE 297
Query: 89 PVGM-----RRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALR 143
P + + L++ELE V LQ + + L Q+ + + E++ +
Sbjct: 298 PPAVPSEVELQHLRKELERVAGELQAQVKN-----NQRISLLNQRQEERIREQEERLRKQ 352
Query: 144 VQELQEQLRVVGEDTKAQ 161
+ +QEQ + + + K Q
Sbjct: 353 EERIQEQHKSLQQLAKPQ 370
>gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein 3
isoform 1 [Homo sapiens]
Length = 632
Score = 43.1 bits (100), Expect = 4e-04
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 29 DYFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQD 88
+Y G++ R +Q +KM++E TLK +QD+ + K L L A LP +
Sbjct: 240 EYSEHLKGERARWQQ-RMRKMSQEICTLKKEKQQDMRRVEKLERSLSKLKNQMAEPLPPE 298
Query: 89 PVGM-----RRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALR 143
P + + L++ELE V LQ + + L Q+ + + E++ +
Sbjct: 299 PPAVPSEVELQHLRKELERVAGELQAQVKN-----NQRISLLNQRQEERIREQEERLRKQ 353
Query: 144 VQELQEQLRVVGEDTKAQ 161
+ +QEQ + + + K Q
Sbjct: 354 EERIQEQHKSLQQLAKPQ 371
>gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 602
Score = 43.1 bits (100), Expect = 4e-04
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 29 DYFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQD 88
+Y G++ R +Q +KM++E TLK +QD+ + K L L A LP +
Sbjct: 239 EYSEHLKGERARWQQ-RMRKMSQEICTLKKEKQQDMRRVEKLERSLSKLKNQMAEPLPPE 297
Query: 89 PVGM-----RRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALR 143
P + + L++ELE V LQ + + L Q+ + + E++ +
Sbjct: 298 PPAVPSEVELQHLRKELERVAGELQAQVKN-----NQRISLLNQRQEERIREQEERLRKQ 352
Query: 144 VQELQEQLRVVGEDTKAQ 161
+ +QEQ + + + K Q
Sbjct: 353 EERIQEQHKSLQQLAKPQ 370
>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 43.1 bits (100), Expect = 4e-04
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 29 DYFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQD 88
+Y G++ R +Q +KM++E TLK +QD+ + K L L A LP +
Sbjct: 240 EYSEHLKGERARWQQ-RMRKMSQEICTLKKEKQQDMRRVEKLERSLSKLKNQMAEPLPPE 298
Query: 89 PVGM-----RRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALR 143
P + + L++ELE V LQ + + L Q+ + + E++ +
Sbjct: 299 PPAVPSEVELQHLRKELERVAGELQAQVKN-----NQRISLLNQRQEERIREQEERLRKQ 353
Query: 144 VQELQEQLRVVGEDTKAQ 161
+ +QEQ + + + K Q
Sbjct: 354 EERIQEQHKSLQQLAKPQ 371
>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
sapiens]
Length = 603
Score = 42.7 bits (99), Expect = 5e-04
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 30 YFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDP 89
Y Q G++ + +Q +KM++E TLK+ + D + + + L L A LP D
Sbjct: 233 YAEQIKGERAQWQQ-RMRKMSQEVCTLKEEKKHDTHRVEELERSLSRLKNQMAEPLPPDA 291
Query: 90 VGMR-----RQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRV 144
+ + L++ELE V LQ E ++ + G +++L+ L EQ R+
Sbjct: 292 PAVSSEVELQDLRKELERVAGELQA-QVENNQCISLLNRGQKERLREQEERLQEQQE-RL 349
Query: 145 QELQEQLRVVGE 156
+E +++L+ + E
Sbjct: 350 REREKRLQQLAE 361
Score = 31.2 bits (69), Expect = 1.5
Identities = 64/302 (21%), Positives = 116/302 (38%), Gaps = 60/302 (19%)
Query: 47 QKMAREPATLKDSLEQDLNNMNKFLEKLRPLSG------SEAPRLPQDPVGMRRQL---Q 97
+ + ++ ++ LE++ N+ + R L G +E +L D M+ L +
Sbjct: 93 KSLKQQKKQVEHQLEEEKKANNEKQKAERELEGQIQRLNTEKKKLNTDLYHMKHSLRYFE 152
Query: 98 EELEEVKARLQPYMAEAHELVGWNLEGLR--QQLKP--------------YTMDLMEQVA 141
EE +++ RLQ EL W+L + Q+ KP + EQ+
Sbjct: 153 EESKDLAGRLQRSSQRIGELE-WSLCAVAATQKKKPDGFSSRSKALLKRQLEQSIREQIL 211
Query: 142 LR--VQELQEQLRVVG--EDTKAQLLGGVDEAWALLQGLQSRVVHHTGRFKELFHPYAES 197
L+ V +L+E L+ V D A+ + G W S+ V K+ E
Sbjct: 212 LKGHVTQLKESLKEVQLERDQYAEQIKGERAQWQQRMRKMSQEVCTLKEEKKHDTHRVEE 271
Query: 198 LVSGIGRHVQELHRSVAPHAPASPARL----------------------SRCVQVLSRKL 235
L + R ++ + P APA + + ++C+ +L+R
Sbjct: 272 LERSLSRLKNQMAEPLPPDAPAVSSEVELQDLRKELERVAGELQAQVENNQCISLLNRGQ 331
Query: 236 TLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGP--DPQMLSEEVRQRLQAFRQDTY 293
+ + R+Q+ ++LRE R ++ A P D + L E + LQ +Q
Sbjct: 332 KERLREQEERLQEQQERLREREKR------LQQLAEPQSDLEELKHENKSALQLEQQVKE 385
Query: 294 LQ 295
LQ
Sbjct: 386 LQ 387
>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
sapiens]
Length = 603
Score = 42.7 bits (99), Expect = 5e-04
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 30 YFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDP 89
Y Q G++ + +Q +KM++E TLK+ + D + + + L L A LP D
Sbjct: 233 YAEQIKGERAQWQQ-RMRKMSQEVCTLKEEKKHDTHRVEELERSLSRLKNQMAEPLPPDA 291
Query: 90 VGMR-----RQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRV 144
+ + L++ELE V LQ E ++ + G +++L+ L EQ R+
Sbjct: 292 PAVSSEVELQDLRKELERVAGELQA-QVENNQCISLLNRGQKERLREQEERLQEQQE-RL 349
Query: 145 QELQEQLRVVGE 156
+E +++L+ + E
Sbjct: 350 REREKRLQQLAE 361
Score = 31.2 bits (69), Expect = 1.5
Identities = 64/302 (21%), Positives = 116/302 (38%), Gaps = 60/302 (19%)
Query: 47 QKMAREPATLKDSLEQDLNNMNKFLEKLRPLSG------SEAPRLPQDPVGMRRQL---Q 97
+ + ++ ++ LE++ N+ + R L G +E +L D M+ L +
Sbjct: 93 KSLKQQKKQVEHQLEEEKKANNEKQKAERELEGQIQRLNTEKKKLNTDLYHMKHSLRYFE 152
Query: 98 EELEEVKARLQPYMAEAHELVGWNLEGLR--QQLKP--------------YTMDLMEQVA 141
EE +++ RLQ EL W+L + Q+ KP + EQ+
Sbjct: 153 EESKDLAGRLQRSSQRIGELE-WSLCAVAATQKKKPDGFSSRSKALLKRQLEQSIREQIL 211
Query: 142 LR--VQELQEQLRVVG--EDTKAQLLGGVDEAWALLQGLQSRVVHHTGRFKELFHPYAES 197
L+ V +L+E L+ V D A+ + G W S+ V K+ E
Sbjct: 212 LKGHVTQLKESLKEVQLERDQYAEQIKGERAQWQQRMRKMSQEVCTLKEEKKHDTHRVEE 271
Query: 198 LVSGIGRHVQELHRSVAPHAPASPARL----------------------SRCVQVLSRKL 235
L + R ++ + P APA + + ++C+ +L+R
Sbjct: 272 LERSLSRLKNQMAEPLPPDAPAVSSEVELQDLRKELERVAGELQAQVENNQCISLLNRGQ 331
Query: 236 TLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGP--DPQMLSEEVRQRLQAFRQDTY 293
+ + R+Q+ ++LRE R ++ A P D + L E + LQ +Q
Sbjct: 332 KERLREQEERLQEQQERLREREKR------LQQLAEPQSDLEELKHENKSALQLEQQVKE 385
Query: 294 LQ 295
LQ
Sbjct: 386 LQ 387
>gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 [Homo sapiens]
Length = 602
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 36 GDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGM--- 92
G++ R +Q +KM++E TLK +QD+ + K L L A LP +P +
Sbjct: 246 GERARWQQ-RMRKMSQEICTLKKEKQQDMRRVEKLERSLSKLKNQMAEPLPPEPPAVPSE 304
Query: 93 --RRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQ 150
+ L++ELE V LQ + + + L Q+ + + E++ + + +QEQ
Sbjct: 305 VELQHLRKELERVAGELQAQVKK-----NQRISLLNQRQEERIQEQEERLRKQEERIQEQ 359
Query: 151 LRVVGEDTKAQ 161
+ + + K Q
Sbjct: 360 HKSLQQLAKPQ 370
>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 41.6 bits (96), Expect = 0.001
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 36 GDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGM--- 92
G++ R +Q +KM++E TLK +QD+ + K L L A LP +P +
Sbjct: 247 GERARWQQ-RMRKMSQEICTLKKEKQQDMRRVEKLERSLSKLKNQMAEPLPPEPPAVPSE 305
Query: 93 --RRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQ 150
+ L++ELE V LQ + + + L Q+ + + E++ + + +QEQ
Sbjct: 306 VELQHLRKELERVAGELQAQVKK-----NQRISLLNQRQEERIQEQEERLRKQEERIQEQ 360
Query: 151 LRVVGEDTKAQ 161
+ + + K Q
Sbjct: 361 HKSLQQLAKPQ 371
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 39.7 bits (91), Expect = 0.004
Identities = 76/342 (22%), Positives = 137/342 (40%), Gaps = 48/342 (14%)
Query: 45 HQQKMAREPATL---KDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELE 101
HQQ++A+ +L K LE L +E ++ + E R + + QL+ E E
Sbjct: 869 HQQELAKALESLEREKMELEMRLKEQQTEMEAIQ--AQREEERTQAESALCQMQLETEKE 926
Query: 102 EVKARLQPYMAEAHELV--GWNLEGLRQQLKPYTMDLMEQVAL---RVQELQEQLRVVGE 156
V L+ + EL LE LRQ +K + E + ++QE Q +L+
Sbjct: 927 RVSL-LETLLQTQKELADASQQLERLRQDMKVQKLKEQETTGILQTQLQEAQRELKEAAR 985
Query: 157 DTKAQLLGGVDEAWALLQ----------GLQSRVVHHTGRFKELFHPYAESLVSGIGRHV 206
+ L +E+ +LLQ L+S++V + + E L R
Sbjct: 986 QHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKL-----RET 1040
Query: 207 QELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGT 266
QE +R + A L+ + ++L + +A R QQ L LR+++ A G
Sbjct: 1041 QEYNR-IQKELEREKASLTLSLMEKEQRLLVLQEADSIR-QQELSALRQDMQEA---QGE 1095
Query: 267 EEGAGPDPQMLSEEVRQRLQAFRQD-------------TYLQIAAFTRAIDQETEEVQQQ 313
++ ++L +EV+++ F T Q+ A A + + ++Q +
Sbjct: 1096 QKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLWAQEAKAAQLQLR 1155
Query: 314 LAPPPPGHSAFAPEFQQTDSGKVLSKLQARLDDLWEDITHSL 355
L A A E Q + ++ QA+L L+ + +L
Sbjct: 1156 LRSTESQLEALAAEQQPGNQ----AQAQAQLASLYSALQQAL 1193
Score = 37.0 bits (84), Expect = 0.028
Identities = 73/321 (22%), Positives = 127/321 (39%), Gaps = 59/321 (18%)
Query: 21 TQARKGFWDYFSQTSGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGS 80
++A++G ++ DK + + QQ+ E LKD LEQ L +++
Sbjct: 1717 SKAQRGSLEHMKLILRDKEKEVEC-QQEHIHELQELKDQLEQQLQGLHR----------- 1764
Query: 81 EAPRLPQDPVGMRRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQV 140
VG L + E+ LQ + EA E + L+ QL + +
Sbjct: 1765 --------KVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQLD----EAQRAL 1812
Query: 141 ALRVQEL----QEQLRVVGEDTKAQ-----LLGGVDEAWALLQGLQSRVVHHTGRFKELF 191
A R QEL QEQ + G++ + + L G +++A L+ + H + + L
Sbjct: 1813 AQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRL- 1871
Query: 192 HPYAESLVSGIGRHVQ-------ELHRSVAPHAPASPARLSRCV------QVLSRKLT-- 236
E ++ GR VQ +L A A +C +V +R L
Sbjct: 1872 ----EEELAVEGRRVQALEEVLGDLRAESREQEKALLALQQQCAEQAQEHEVETRALQDS 1927
Query: 237 -LKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGPDPQMLSEEVRQRLQAF--RQDTY 293
L+A+A+ Q L+ LR E + + EE A + L E + + A ++
Sbjct: 1928 WLQAQAVLKERDQELEALRAE---SQSSRHQEEAARARAEALQEALGKAHAALQGKEQHL 1984
Query: 294 LQIAAFTRAIDQETEEVQQQL 314
L+ A +R+++ T +Q L
Sbjct: 1985 LEQAELSRSLEASTATLQASL 2005
Score = 29.6 bits (65), Expect = 4.5
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 41 VEQIHQQKMAREPATLKDSLEQDLNNMNKFLEK------LRPLSGSEAPRLPQDPVGMRR 94
V Q Q++ + K Q+ N + K LE+ L + + + Q+ +R
Sbjct: 1020 VAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIR- 1078
Query: 95 QLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQ 148
Q+EL ++ +Q E EL +E LRQ++K D + Q A ++EL+
Sbjct: 1079 --QQELSALRQDMQEAQGEQKELSA-QMELLRQEVKEKEADFLAQEAQLLEELE 1129
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 39.7 bits (91), Expect = 0.004
Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 43/280 (15%)
Query: 45 HQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVK 104
H ++ +E A +D +Q + + +++LR + ++ V + QL+EE +V+
Sbjct: 384 HVGEIEQELALARDGHDQHVLELEAKMDQLRTM----VEAADREKVELLNQLEEEKRKVE 439
Query: 105 ARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQLLG 164
LQ + E + +LE K M+L + +ALRVQE+ E R + + A G
Sbjct: 440 D-LQ-FRVEEESITKGDLEVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPA---G 494
Query: 165 GVDEAWALLQ---GLQSRV-VHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPHAPAS 220
VD + +LLQ LQ ++ V T +E+ SL G +E H+ +
Sbjct: 495 DVDMSLSLLQEISSLQEKLEVTRTDHQREI-----TSLKEHFGAR-EETHQKEIKALYTA 548
Query: 221 PARLSRCVQVLSRKL--------------TLKAKALHARIQQNLDQLREELSRAFAGTGT 266
+LS+ + L KL K + A QQ +++L+ S+ GT T
Sbjct: 549 TEKLSKENESLKSKLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGL-GTET 607
Query: 267 EEGAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQE 306
E A E++ +++ R D +I D E
Sbjct: 608 AEFA---------ELKTQIEKMRLDYQHEIENLQNQQDSE 638
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 39.7 bits (91), Expect = 0.004
Identities = 63/295 (21%), Positives = 118/295 (40%), Gaps = 50/295 (16%)
Query: 60 LEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKARLQPYMAEAHELVG 119
LE D +++ L+K + + +D + Q Q++++E++AR++ E
Sbjct: 1070 LENDKQQLDERLKK-KDFEYCQLQSKVEDEQTLGLQFQKKIKELQARIEELEEEIEA--- 1125
Query: 120 WNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVGEDTKAQL-LGGVDEA--WALLQGL 176
+ + T A ++EL E+L G T Q+ L EA L + L
Sbjct: 1126 ------ERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDL 1179
Query: 177 QSRVVHHTGRFKELFHPYAESLVSGIGRHVQELHR--------------------SVAPH 216
+ + H L +A+S V+ +G + L R S
Sbjct: 1180 EEATLQHEAMVAALRKKHADS-VAELGEQIDNLQRVKQKLEKEKSEFKLEIDDLSSSMES 1238
Query: 217 APASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGPDPQM 276
S A L + + L +L+ +A+ + IQ++L +L + SR TE G
Sbjct: 1239 VSKSKANLEKICRTLEDQLS-EARGKNEEIQRSLSELTTQKSRL----QTEAGE------ 1287
Query: 277 LSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQLAPPPPGHSAFAPEFQQT 331
LS ++ ++ + Q++ +A Q+TEE+++QL +A A Q +
Sbjct: 1288 LSRQLEEK-----ESIVSQLSRSKQAFTQQTEELKRQLEEENKAKNALAHALQSS 1337
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 39.7 bits (91), Expect = 0.004
Identities = 72/330 (21%), Positives = 133/330 (40%), Gaps = 50/330 (15%)
Query: 42 EQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLP--------------- 86
E+ H ++ ++ ++L L+ ++N+++ E+L S + RL
Sbjct: 453 ERGHFEEEKQQLSSLITDLQSSISNLSQAKEELEQASQAHGARLTAQVASLTSELTTLNA 512
Query: 87 ------QDPVGMRRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLME-- 138
Q+ G+++Q +E+ ++ LQ +A + + +E L LK L E
Sbjct: 513 TIQQQDQELAGLKQQAKEKQAQLAQTLQQ-QEQASQGLRHQVEQLSSSLKQKEQQLKEVA 571
Query: 139 --QVALRVQELQEQLRVVGEDTKAQLLGGVDEAWALLQGLQSR------VVHHTGRFKEL 190
Q A R Q+ +QL E+ +A L D A L+ L+ ++ +
Sbjct: 572 EKQEATR-QDHAQQLATAAEEREASLRER-DAALKQLEALEKEKAAKLEILQQQLQVANE 629
Query: 191 FHPYAESLVSGIGRHVQELHRSVAP-HAPASPARLSRC---VQVLSRKLTLKAKALHA-- 244
A++ V+ R EL R V A AR + QV +L L+++ A
Sbjct: 630 ARDSAQTSVTQAQREKAELSRKVEELQACVETARQEQHEAQAQVAELELQLRSEQQKATE 689
Query: 245 --RIQQNLDQLREELSRAFAGTGTEEGAGPDPQMLSEEVRQRLQAF--RQDTYLQIAAFT 300
R+ Q DQL+E+L +G+ L EE R+ A +Q ++ A T
Sbjct: 690 KERVAQEKDQLQEQLQALKESLKVTKGS------LEEEKRRAADALEEQQRCISELKAET 743
Query: 301 RAIDQETEEVQQQLAPPPPGHSAFAPEFQQ 330
R++ ++ + +++L G QQ
Sbjct: 744 RSLVEQHKRERKELEEERAGRKGLEARLQQ 773
Score = 35.0 bits (79), Expect = 0.11
Identities = 69/326 (21%), Positives = 132/326 (40%), Gaps = 48/326 (14%)
Query: 42 EQIHQQKMAREPATLKDSL---EQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQE 98
+++ QK+A + +TL++ + +++ + + K + + L ++P + E
Sbjct: 891 KEVRAQKLADDLSTLQEKMAATSKEVARLETLVRKAGEQQETASRELVKEPARAGDRQPE 950
Query: 99 ELEEVKAR--------LQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQ 150
LEE + R LQ EA ++ G LE LR L E+ R Q+ +E
Sbjct: 951 WLEEQQGRQFCSTQAALQAMEREAEQM-GNELERLRAALMESQGQQQEE---RGQQEREV 1006
Query: 151 LRVVGEDTKAQLLGGVDEAWA--LLQGLQSRVVHHTGRFKELFHPYAESLVSGIGRHVQE 208
R+ E +AQ +++A L LQ+ + F L A +L G+ QE
Sbjct: 1007 ARLTQERGRAQADLALEKAARAELEMRLQNALNEQRVEFATLQEALAHALTEKEGKD-QE 1065
Query: 209 LHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEE 268
L A+L ++L ++Q + QL+E+L++ +
Sbjct: 1066 L------------AKLRGLEAAQIKELE--------ELRQTVKQLKEQLAKKEKEHASGS 1105
Query: 269 GAGPDPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQLAPPPPGHSAFAPEF 328
GA + +E +L+A R A ++Q+ ++ Q+Q S A
Sbjct: 1106 GAQSEAAGRTEPTGPKLEALR--------AEVSKLEQQCQKQQEQ--ADSLERSLEAERA 1155
Query: 329 QQTDSGKVLSKLQARLDDLWEDITHS 354
+ + L LQ +L++ +++ HS
Sbjct: 1156 SRAERDSALETLQGQLEEKAQELGHS 1181
Score = 30.8 bits (68), Expect = 2.0
Identities = 73/324 (22%), Positives = 122/324 (37%), Gaps = 61/324 (18%)
Query: 47 QKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEELEEVKAR 106
+ + +E A + L+Q L N+ + + S ++A R + +L ++EE++A
Sbjct: 607 EALEKEKAAKLEILQQQLQVANEARDSAQT-SVTQAQR-------EKAELSRKVEELQAC 658
Query: 107 LQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQ--VALRVQELQEQLRVVGEDTKAQLLG 164
++ E HE E L QL+ E+ VA +LQEQL+ + E K G
Sbjct: 659 VETARQEQHEAQAQVAE-LELQLRSEQQKATEKERVAQEKDQLQEQLQALKESLKV-TKG 716
Query: 165 GVDEAWALLQGLQSRVVHHTGRFKELFHPYAESLVSGIGRHVQELHRSVAPHAPASPARL 224
++E + + + R SLV R +EL A
Sbjct: 717 SLEEE----KRRAADALEEQQRCISELKAETRSLVEQHKRERKELEEERAGR-------- 764
Query: 225 SRCVQVLSRKLTLKAKALHARIQQ-------NLDQLREELSRAFAGTGTEEGAGPDPQML 277
K L AR+QQ + LR EL+ A A T E + + L
Sbjct: 765 ---------------KGLEARLQQLGEAHQAETEVLRRELAEAMAAQHTAES---ECEQL 806
Query: 278 SEEV---RQRLQAFRQDTYLQIAAFTR---AIDQETEEVQQQLAPPP------PGHSAFA 325
+EV R+R + +Q+ A F + +E E+ +Q+L HS
Sbjct: 807 VKEVAAWRERYEDSQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIESHSELQ 866
Query: 326 PEFQQTDSGKVLSKLQARLDDLWE 349
QQ + ++ + L L + E
Sbjct: 867 ISRQQNELAELHANLARALQQVQE 890
>gi|126723390 ankyrin repeat domain 24 [Homo sapiens]
Length = 1146
Score = 39.3 bits (90), Expect = 0.006
Identities = 71/316 (22%), Positives = 125/316 (39%), Gaps = 64/316 (20%)
Query: 35 SGDKGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRR 94
+ + GR + ++A PA +++ + L +LR SEA R P R
Sbjct: 871 AAELGRARDAAEARVAELPAACEEARQG--------LAELR--EASEALRQSVVPASEHR 920
Query: 95 QLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVV 154
+LQEE E++ R + E+V E R + + +E+ + L E R+V
Sbjct: 921 RLQEEALELRGRA---ASLEQEVVATGKEAARLRAE------LERERVCSVALSEHERIV 971
Query: 155 G--EDTKAQLLGGVDEAWALLQGLQSRVVHHTGRFKELFHPYAESLVSGIGRHVQELHRS 212
G + AQL G ++E H E+F E+L RH
Sbjct: 972 GTLQANVAQLEGQLEELGR----------RHEKTSAEVFQVQREALFMKSERH------- 1014
Query: 213 VAPHAPASPARLSRCVQVLS--RKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGA 270
A+ A+L+ Q L R +A+ +R Q+ LD+ +E+ + TE
Sbjct: 1015 ------AAEAQLATAEQQLRGLRTEAERARQAQSRAQEALDKAKEKDKKI-----TE--- 1060
Query: 271 GPDPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQLAPPPPGHSAFAPEFQQ 330
LS+EV +A ++ A+ + +++QQQL HS+ ++
Sbjct: 1061 ------LSKEVFNLKEALKEQPAALATPEVEALRDQVKDLQQQLQEAARDHSSVVALYR- 1113
Query: 331 TDSGKVLSKLQARLDD 346
+L +Q ++D+
Sbjct: 1114 ---SHLLYAIQGQMDE 1126
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 38.9 bits (89), Expect = 0.007
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 42 EQIHQQKMAREPATL--KDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEE 99
EQ+ Q+ A + + L KDSL Q + + KL L E + Q +RQ Q++
Sbjct: 2482 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQ-QQQ 2540
Query: 100 LEEVKARLQPYMAEAHELVGWNLEGLR------QQLKPYTMDLMEQVALRVQELQEQLRV 153
+E+ + RL M EA EG+R QQL+ E +A Q L+EQL++
Sbjct: 2541 MEQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQL 2600
Query: 154 VGEDTKAQL 162
+ E +A L
Sbjct: 2601 LEEQHRAAL 2609
Score = 33.1 bits (74), Expect = 0.40
Identities = 56/305 (18%), Positives = 119/305 (39%), Gaps = 36/305 (11%)
Query: 38 KGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLP----------- 86
K ++++ Q A++P D+L +L + E+L+ G +
Sbjct: 1129 KASLKKLRAQAEAQQPTF--DALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLE 1186
Query: 87 --QDPVGMRRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRV 144
Q + Q ELE++ +L+ Y A L W + R+Q + M L + A+R
Sbjct: 1187 RWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMPLADSQAVRE 1246
Query: 145 QELQEQLRVVGEDTKAQLLGGVDEAWAL-------LQGLQSRVVHHTGRFKELFHPYAES 197
Q QEQ + + + V+E ++ + ++V + + + + P +
Sbjct: 1247 QLRQEQALLEEIERHGE---KVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKKP 1303
Query: 198 LVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREEL 257
V V + + + H S+ ++ +S L + QQ ++ RE L
Sbjct: 1304 KVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEE-RERL 1362
Query: 258 SRAFAGTGTEE-------GAGPDPQMLSEEVRQRLQ---AFRQDTYLQIAAFTRAIDQET 307
+ A + A + ++E++QR+Q R++ + R+I +E
Sbjct: 1363 AEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEEL 1422
Query: 308 EEVQQ 312
++++Q
Sbjct: 1423 QQLRQ 1427
Score = 32.3 bits (72), Expect = 0.69
Identities = 65/282 (23%), Positives = 107/282 (37%), Gaps = 45/282 (15%)
Query: 38 KGRVEQIHQQKMAR--EPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQ 95
+ E++ +K+A E LK E L E+LR RL +D RR+
Sbjct: 1828 RAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLR--------RLAEDEAFQRRR 1879
Query: 96 LQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVG 155
L+E+ + KA ++ +A+ + LE RQ+ L+E + ++++E++ +
Sbjct: 1880 LEEQAAQHKADIEERLAQLRKASDSELE--RQK------GLVEDTLRQRRQVEEEILALK 1931
Query: 156 EDTKAQLLGGVDEAWALLQGLQSRVVHHTGRFK---ELFHPYAESLVSGIGRHVQELHRS 212
+ G + L G T R K EL L + R +E
Sbjct: 1932 ASFEKAAAGKAELELEL--GRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEER 1989
Query: 213 VAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGP 272
V A + L LKAK AR +LRE E+ +
Sbjct: 1990 VQKSLAAEEEAARQRKAALEEVERLKAKVEEAR------RLRER---------AEQESAR 2034
Query: 273 DPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQL 314
Q+ E ++RLQA + A A+ Q+ +E+QQ L
Sbjct: 2035 QLQLAQEAAQKRLQA-------EEKAHAFAVQQKEQELQQTL 2069
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 38.9 bits (89), Expect = 0.007
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 42 EQIHQQKMAREPATL--KDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEE 99
EQ+ Q+ A + + L KDSL Q + + KL L E + Q +RQ Q++
Sbjct: 2486 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQ-QQQ 2544
Query: 100 LEEVKARLQPYMAEAHELVGWNLEGLR------QQLKPYTMDLMEQVALRVQELQEQLRV 153
+E+ + RL M EA EG+R QQL+ E +A Q L+EQL++
Sbjct: 2545 MEQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQL 2604
Query: 154 VGEDTKAQL 162
+ E +A L
Sbjct: 2605 LEEQHRAAL 2613
Score = 33.1 bits (74), Expect = 0.40
Identities = 56/305 (18%), Positives = 119/305 (39%), Gaps = 36/305 (11%)
Query: 38 KGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLP----------- 86
K ++++ Q A++P D+L +L + E+L+ G +
Sbjct: 1133 KASLKKLRAQAEAQQPTF--DALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLE 1190
Query: 87 --QDPVGMRRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRV 144
Q + Q ELE++ +L+ Y A L W + R+Q + M L + A+R
Sbjct: 1191 RWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMPLADSQAVRE 1250
Query: 145 QELQEQLRVVGEDTKAQLLGGVDEAWAL-------LQGLQSRVVHHTGRFKELFHPYAES 197
Q QEQ + + + V+E ++ + ++V + + + + P +
Sbjct: 1251 QLRQEQALLEEIERHGE---KVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKKP 1307
Query: 198 LVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREEL 257
V V + + + H S+ ++ +S L + QQ ++ RE L
Sbjct: 1308 KVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEE-RERL 1366
Query: 258 SRAFAGTGTEE-------GAGPDPQMLSEEVRQRLQ---AFRQDTYLQIAAFTRAIDQET 307
+ A + A + ++E++QR+Q R++ + R+I +E
Sbjct: 1367 AEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEEL 1426
Query: 308 EEVQQ 312
++++Q
Sbjct: 1427 QQLRQ 1431
Score = 32.3 bits (72), Expect = 0.69
Identities = 65/282 (23%), Positives = 107/282 (37%), Gaps = 45/282 (15%)
Query: 38 KGRVEQIHQQKMAR--EPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQ 95
+ E++ +K+A E LK E L E+LR RL +D RR+
Sbjct: 1832 RAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLR--------RLAEDEAFQRRR 1883
Query: 96 LQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVG 155
L+E+ + KA ++ +A+ + LE RQ+ L+E + ++++E++ +
Sbjct: 1884 LEEQAAQHKADIEERLAQLRKASDSELE--RQK------GLVEDTLRQRRQVEEEILALK 1935
Query: 156 EDTKAQLLGGVDEAWALLQGLQSRVVHHTGRFK---ELFHPYAESLVSGIGRHVQELHRS 212
+ G + L G T R K EL L + R +E
Sbjct: 1936 ASFEKAAAGKAELELEL--GRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEER 1993
Query: 213 VAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGP 272
V A + L LKAK AR +LRE E+ +
Sbjct: 1994 VQKSLAAEEEAARQRKAALEEVERLKAKVEEAR------RLRER---------AEQESAR 2038
Query: 273 DPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQL 314
Q+ E ++RLQA + A A+ Q+ +E+QQ L
Sbjct: 2039 QLQLAQEAAQKRLQA-------EEKAHAFAVQQKEQELQQTL 2073
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 38.9 bits (89), Expect = 0.007
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 42 EQIHQQKMAREPATL--KDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEE 99
EQ+ Q+ A + + L KDSL Q + + KL L E + Q +RQ Q++
Sbjct: 2482 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQ-QQQ 2540
Query: 100 LEEVKARLQPYMAEAHELVGWNLEGLR------QQLKPYTMDLMEQVALRVQELQEQLRV 153
+E+ + RL M EA EG+R QQL+ E +A Q L+EQL++
Sbjct: 2541 MEQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQL 2600
Query: 154 VGEDTKAQL 162
+ E +A L
Sbjct: 2601 LEEQHRAAL 2609
Score = 33.1 bits (74), Expect = 0.40
Identities = 56/305 (18%), Positives = 119/305 (39%), Gaps = 36/305 (11%)
Query: 38 KGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLP----------- 86
K ++++ Q A++P D+L +L + E+L+ G +
Sbjct: 1129 KASLKKLRAQAEAQQPTF--DALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLE 1186
Query: 87 --QDPVGMRRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRV 144
Q + Q ELE++ +L+ Y A L W + R+Q + M L + A+R
Sbjct: 1187 RWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMPLADSQAVRE 1246
Query: 145 QELQEQLRVVGEDTKAQLLGGVDEAWAL-------LQGLQSRVVHHTGRFKELFHPYAES 197
Q QEQ + + + V+E ++ + ++V + + + + P +
Sbjct: 1247 QLRQEQALLEEIERHGE---KVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKKP 1303
Query: 198 LVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREEL 257
V V + + + H S+ ++ +S L + QQ ++ RE L
Sbjct: 1304 KVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEE-RERL 1362
Query: 258 SRAFAGTGTEE-------GAGPDPQMLSEEVRQRLQ---AFRQDTYLQIAAFTRAIDQET 307
+ A + A + ++E++QR+Q R++ + R+I +E
Sbjct: 1363 AEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEEL 1422
Query: 308 EEVQQ 312
++++Q
Sbjct: 1423 QQLRQ 1427
Score = 32.3 bits (72), Expect = 0.69
Identities = 65/282 (23%), Positives = 107/282 (37%), Gaps = 45/282 (15%)
Query: 38 KGRVEQIHQQKMAR--EPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQ 95
+ E++ +K+A E LK E L E+LR RL +D RR+
Sbjct: 1828 RAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLR--------RLAEDEAFQRRR 1879
Query: 96 LQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVG 155
L+E+ + KA ++ +A+ + LE RQ+ L+E + ++++E++ +
Sbjct: 1880 LEEQAAQHKADIEERLAQLRKASDSELE--RQK------GLVEDTLRQRRQVEEEILALK 1931
Query: 156 EDTKAQLLGGVDEAWALLQGLQSRVVHHTGRFK---ELFHPYAESLVSGIGRHVQELHRS 212
+ G + L G T R K EL L + R +E
Sbjct: 1932 ASFEKAAAGKAELELEL--GRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEER 1989
Query: 213 VAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGP 272
V A + L LKAK AR +LRE E+ +
Sbjct: 1990 VQKSLAAEEEAARQRKAALEEVERLKAKVEEAR------RLRER---------AEQESAR 2034
Query: 273 DPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQL 314
Q+ E ++RLQA + A A+ Q+ +E+QQ L
Sbjct: 2035 QLQLAQEAAQKRLQA-------EEKAHAFAVQQKEQELQQTL 2069
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 38.9 bits (89), Expect = 0.007
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 42 EQIHQQKMAREPATL--KDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEE 99
EQ+ Q+ A + + L KDSL Q + + KL L E + Q +RQ Q++
Sbjct: 2450 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQ-QQQ 2508
Query: 100 LEEVKARLQPYMAEAHELVGWNLEGLR------QQLKPYTMDLMEQVALRVQELQEQLRV 153
+E+ + RL M EA EG+R QQL+ E +A Q L+EQL++
Sbjct: 2509 MEQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQL 2568
Query: 154 VGEDTKAQL 162
+ E +A L
Sbjct: 2569 LEEQHRAAL 2577
Score = 33.1 bits (74), Expect = 0.40
Identities = 56/305 (18%), Positives = 119/305 (39%), Gaps = 36/305 (11%)
Query: 38 KGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLP----------- 86
K ++++ Q A++P D+L +L + E+L+ G +
Sbjct: 1097 KASLKKLRAQAEAQQPTF--DALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLE 1154
Query: 87 --QDPVGMRRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRV 144
Q + Q ELE++ +L+ Y A L W + R+Q + M L + A+R
Sbjct: 1155 RWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMPLADSQAVRE 1214
Query: 145 QELQEQLRVVGEDTKAQLLGGVDEAWAL-------LQGLQSRVVHHTGRFKELFHPYAES 197
Q QEQ + + + V+E ++ + ++V + + + + P +
Sbjct: 1215 QLRQEQALLEEIERHGE---KVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKKP 1271
Query: 198 LVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREEL 257
V V + + + H S+ ++ +S L + QQ ++ RE L
Sbjct: 1272 KVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEE-RERL 1330
Query: 258 SRAFAGTGTEE-------GAGPDPQMLSEEVRQRLQ---AFRQDTYLQIAAFTRAIDQET 307
+ A + A + ++E++QR+Q R++ + R+I +E
Sbjct: 1331 AEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEEL 1390
Query: 308 EEVQQ 312
++++Q
Sbjct: 1391 QQLRQ 1395
Score = 32.3 bits (72), Expect = 0.69
Identities = 65/282 (23%), Positives = 107/282 (37%), Gaps = 45/282 (15%)
Query: 38 KGRVEQIHQQKMAR--EPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQ 95
+ E++ +K+A E LK E L E+LR RL +D RR+
Sbjct: 1796 RAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLR--------RLAEDEAFQRRR 1847
Query: 96 LQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVG 155
L+E+ + KA ++ +A+ + LE RQ+ L+E + ++++E++ +
Sbjct: 1848 LEEQAAQHKADIEERLAQLRKASDSELE--RQK------GLVEDTLRQRRQVEEEILALK 1899
Query: 156 EDTKAQLLGGVDEAWALLQGLQSRVVHHTGRFK---ELFHPYAESLVSGIGRHVQELHRS 212
+ G + L G T R K EL L + R +E
Sbjct: 1900 ASFEKAAAGKAELELEL--GRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEER 1957
Query: 213 VAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGP 272
V A + L LKAK AR +LRE E+ +
Sbjct: 1958 VQKSLAAEEEAARQRKAALEEVERLKAKVEEAR------RLRER---------AEQESAR 2002
Query: 273 DPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQL 314
Q+ E ++RLQA + A A+ Q+ +E+QQ L
Sbjct: 2003 QLQLAQEAAQKRLQA-------EEKAHAFAVQQKEQELQQTL 2037
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 38.9 bits (89), Expect = 0.007
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 42 EQIHQQKMAREPATL--KDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEE 99
EQ+ Q+ A + + L KDSL Q + + KL L E + Q +RQ Q++
Sbjct: 2619 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQ-QQQ 2677
Query: 100 LEEVKARLQPYMAEAHELVGWNLEGLR------QQLKPYTMDLMEQVALRVQELQEQLRV 153
+E+ + RL M EA EG+R QQL+ E +A Q L+EQL++
Sbjct: 2678 MEQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQL 2737
Query: 154 VGEDTKAQL 162
+ E +A L
Sbjct: 2738 LEEQHRAAL 2746
Score = 33.1 bits (74), Expect = 0.40
Identities = 56/305 (18%), Positives = 119/305 (39%), Gaps = 36/305 (11%)
Query: 38 KGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLP----------- 86
K ++++ Q A++P D+L +L + E+L+ G +
Sbjct: 1266 KASLKKLRAQAEAQQPTF--DALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLE 1323
Query: 87 --QDPVGMRRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRV 144
Q + Q ELE++ +L+ Y A L W + R+Q + M L + A+R
Sbjct: 1324 RWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMPLADSQAVRE 1383
Query: 145 QELQEQLRVVGEDTKAQLLGGVDEAWAL-------LQGLQSRVVHHTGRFKELFHPYAES 197
Q QEQ + + + V+E ++ + ++V + + + + P +
Sbjct: 1384 QLRQEQALLEEIERHGE---KVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKKP 1440
Query: 198 LVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREEL 257
V V + + + H S+ ++ +S L + QQ ++ RE L
Sbjct: 1441 KVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEE-RERL 1499
Query: 258 SRAFAGTGTEE-------GAGPDPQMLSEEVRQRLQ---AFRQDTYLQIAAFTRAIDQET 307
+ A + A + ++E++QR+Q R++ + R+I +E
Sbjct: 1500 AEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEEL 1559
Query: 308 EEVQQ 312
++++Q
Sbjct: 1560 QQLRQ 1564
Score = 32.3 bits (72), Expect = 0.69
Identities = 65/282 (23%), Positives = 107/282 (37%), Gaps = 45/282 (15%)
Query: 38 KGRVEQIHQQKMAR--EPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQ 95
+ E++ +K+A E LK E L E+LR RL +D RR+
Sbjct: 1965 RAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLR--------RLAEDEAFQRRR 2016
Query: 96 LQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVG 155
L+E+ + KA ++ +A+ + LE RQ+ L+E + ++++E++ +
Sbjct: 2017 LEEQAAQHKADIEERLAQLRKASDSELE--RQK------GLVEDTLRQRRQVEEEILALK 2068
Query: 156 EDTKAQLLGGVDEAWALLQGLQSRVVHHTGRFK---ELFHPYAESLVSGIGRHVQELHRS 212
+ G + L G T R K EL L + R +E
Sbjct: 2069 ASFEKAAAGKAELELEL--GRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEER 2126
Query: 213 VAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGP 272
V A + L LKAK AR +LRE E+ +
Sbjct: 2127 VQKSLAAEEEAARQRKAALEEVERLKAKVEEAR------RLRER---------AEQESAR 2171
Query: 273 DPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQL 314
Q+ E ++RLQA + A A+ Q+ +E+QQ L
Sbjct: 2172 QLQLAQEAAQKRLQA-------EEKAHAFAVQQKEQELQQTL 2206
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 38.9 bits (89), Expect = 0.007
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 42 EQIHQQKMAREPATL--KDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQLQEE 99
EQ+ Q+ A + + L KDSL Q + + KL L E + Q +RQ Q++
Sbjct: 2460 EQLLQETQALQQSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQ-QQQ 2518
Query: 100 LEEVKARLQPYMAEAHELVGWNLEGLR------QQLKPYTMDLMEQVALRVQELQEQLRV 153
+E+ + RL M EA EG+R QQL+ E +A Q L+EQL++
Sbjct: 2519 MEQERQRLVASMEEARRRQHEAEEGVRRKQEELQQLEQQRRQQEELLAEENQRLREQLQL 2578
Query: 154 VGEDTKAQL 162
+ E +A L
Sbjct: 2579 LEEQHRAAL 2587
Score = 33.1 bits (74), Expect = 0.40
Identities = 56/305 (18%), Positives = 119/305 (39%), Gaps = 36/305 (11%)
Query: 38 KGRVEQIHQQKMAREPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLP----------- 86
K ++++ Q A++P D+L +L + E+L+ G +
Sbjct: 1107 KASLKKLRAQAEAQQPTF--DALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLE 1164
Query: 87 --QDPVGMRRQLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRV 144
Q + Q ELE++ +L+ Y A L W + R+Q + M L + A+R
Sbjct: 1165 RWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAMPLADSQAVRE 1224
Query: 145 QELQEQLRVVGEDTKAQLLGGVDEAWAL-------LQGLQSRVVHHTGRFKELFHPYAES 197
Q QEQ + + + V+E ++ + ++V + + + + P +
Sbjct: 1225 QLRQEQALLEEIERHGE---KVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKKP 1281
Query: 198 LVSGIGRHVQELHRSVAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREEL 257
V V + + + H S+ ++ +S L + QQ ++ RE L
Sbjct: 1282 KVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEE-RERL 1340
Query: 258 SRAFAGTGTEE-------GAGPDPQMLSEEVRQRLQ---AFRQDTYLQIAAFTRAIDQET 307
+ A + A + ++E++QR+Q R++ + R+I +E
Sbjct: 1341 AEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEEL 1400
Query: 308 EEVQQ 312
++++Q
Sbjct: 1401 QQLRQ 1405
Score = 32.3 bits (72), Expect = 0.69
Identities = 65/282 (23%), Positives = 107/282 (37%), Gaps = 45/282 (15%)
Query: 38 KGRVEQIHQQKMAR--EPATLKDSLEQDLNNMNKFLEKLRPLSGSEAPRLPQDPVGMRRQ 95
+ E++ +K+A E LK E L E+LR RL +D RR+
Sbjct: 1806 RAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLR--------RLAEDEAFQRRR 1857
Query: 96 LQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQLRVVG 155
L+E+ + KA ++ +A+ + LE RQ+ L+E + ++++E++ +
Sbjct: 1858 LEEQAAQHKADIEERLAQLRKASDSELE--RQK------GLVEDTLRQRRQVEEEILALK 1909
Query: 156 EDTKAQLLGGVDEAWALLQGLQSRVVHHTGRFK---ELFHPYAESLVSGIGRHVQELHRS 212
+ G + L G T R K EL L + R +E
Sbjct: 1910 ASFEKAAAGKAELELEL--GRIRSNAEDTLRSKEQAELEAARQRQLAAEEERRRREAEER 1967
Query: 213 VAPHAPASPARLSRCVQVLSRKLTLKAKALHARIQQNLDQLREELSRAFAGTGTEEGAGP 272
V A + L LKAK AR +LRE E+ +
Sbjct: 1968 VQKSLAAEEEAARQRKAALEEVERLKAKVEEAR------RLRER---------AEQESAR 2012
Query: 273 DPQMLSEEVRQRLQAFRQDTYLQIAAFTRAIDQETEEVQQQL 314
Q+ E ++RLQA + A A+ Q+ +E+QQ L
Sbjct: 2013 QLQLAQEAAQKRLQA-------EEKAHAFAVQQKEQELQQTL 2047
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,374,375
Number of Sequences: 37866
Number of extensions: 656417
Number of successful extensions: 3847
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 3560
Number of HSP's gapped (non-prelim): 452
length of query: 366
length of database: 18,247,518
effective HSP length: 104
effective length of query: 262
effective length of database: 14,309,454
effective search space: 3749076948
effective search space used: 3749076948
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.