APOA1 29863

Name: APOA1	Sequence: fasta or formatted (267aa)		NCBI GI: 4557321
Description: apolipoprotein A-I preproprotein		Referenced in: Bile Acids and Other Cholesterol Derivatives Lipoproteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 23 2 C cysteine 0.0 0 0 D aspartate 6.0 16 2 E glutamate 11.2 30 2 F phenylalanine 3.0 8 1 G glycine 4.1 11 2 H histidine 2.2 6 1 I isoleucine 0.0 0 0 K lysine 8.2 22 2 L leucine 15.4 41 2 M methionine 1.5 4 1 N asparagine 1.9 5 1 P proline 3.7 10 2 Q glutamine 7.1 19 2 R arginine 6.4 17 1 S serine 6.0 16 1 T threonine 4.5 12 1 V valine 5.6 15 1 W tryptophan 1.9 5 1 Y tyrosine 2.6 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein A-I preproprotein APOA4 0.163 apolipoprotein A-IV precursor APOA5 0.089 apolipoprotein AV APOE 0.067 apolipoprotein E precursor CEP164 0.044 centrosomal protein 164kDa FAM184A 0.042 hypothetical protein LOC79632 isoform 2 FAM184A 0.042 hypothetical protein LOC79632 isoform 1 FAM184B 0.038 hypothetical protein LOC27146 MYH10 0.036 myosin, heavy polypeptide 10, non-muscle CLIP2 0.036 CAP-GLY domain containing linker protein 2 isoform ... CLIP2 0.036 CAP-GLY domain containing linker protein 2 isoform 2... SMC3 0.034 structural maintenance of chromosomes 3 EPS15 0.034 epidermal growth factor receptor pathway substrate ... EPS15 0.034 epidermal growth factor receptor pathway substrate 15... TNNT2 0.034 troponin T type 2, cardiac isoform 4 MYH14 0.034 myosin, heavy chain 14 isoform 1 MYH14 0.034 myosin, heavy chain 14 isoform 2 MYH14 0.034 myosin, heavy chain 14 isoform 3 LOC283685 0.032 PREDICTED: golgi autoantigen, golgin subfamily a-li... SASS6 0.032 spindle assembly abnormal protein 6 TNNT2 0.032 troponin T type 2, cardiac isoform 2 NUMA1 0.032 nuclear mitotic apparatus protein 1 TNNT2 0.030 troponin T type 2, cardiac isoform 3 TNNT2 0.030 troponin T type 2, cardiac isoform 1 LAMA2 0.030 laminin alpha 2 subunit isoform b precursor LAMA2 0.030 laminin alpha 2 subunit isoform a precursor MYH8 0.030 myosin, heavy chain 8, skeletal muscle, perinatal [... TNNT3 0.030 troponin T3, skeletal, fast isoform 2 TNNT3 0.030 troponin T3, skeletal, fast isoform 3 TNNT3 0.030 troponin T3, skeletal, fast isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.