Guide to the Human Genome
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Name: AURKC Sequence: fasta or formatted (290aa) NCBI GI: 62865641
Description:

aurora kinase C isoform 2

Referenced in:

Centromere Proteins

Other entries for this name:
alt prot [309aa] aurora kinase C isoform 1
alt prot [275aa] aurora kinase C isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         19           1
 C cysteine            1.7          5           1
 D aspartate           4.5         13           2
 E glutamate           7.9         23           2
 F phenylalanine       3.1          9           1
 G glycine             4.8         14           1
 H histidine           3.8         11           1
 I isoleucine          5.9         17           2
 K lysine              5.9         17           2
 L leucine            13.4         39           3
 M methionine          2.1          6           1
 N asparagine          1.7          5           1
 P proline             6.2         18           2
 Q glutamine           4.5         13           2
 R arginine            8.6         25           2
 S serine              4.8         14           2
 T threonine           3.8         11           1
 V valine              5.2         15           1
 W tryptophan          1.0          3           1
 Y tyrosine            4.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aurora kinase C isoform 2 
AURKC                 0.996   aurora kinase C isoform 1 
AURKC                 0.949   aurora kinase C isoform 3 
AURKB                 0.798   aurora kinase B 
AURKA                 0.658   serine/threonine protein kinase 6 
AURKA                 0.658   serine/threonine protein kinase 6 
AURKA                 0.658   serine/threonine protein kinase 6 
AURKA                 0.658   serine/threonine protein kinase 6 
AURKA                 0.658   serine/threonine protein kinase 6 
AURKA                 0.658   serine/threonine protein kinase 6 
PLK4                  0.278   polo-like kinase 4 
QSK                   0.271   serine/threonine-protein kinase QSK 
MARK3                 0.264   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.264   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.264   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.264   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK4                 0.262   MAP/microtubule affinity-regulating kinase 4 
STK36                 0.258   serine/threonine kinase 36 
MARK1                 0.258   MAP/microtubule affinity-regulating kinase 1 
NUAK1                 0.258   AMPK-related protein kinase 5 
SIK1                  0.255   SNF1-like kinase 
PRKCH                 0.255   protein kinase C, eta 
LOC100293250          0.255   PREDICTED: similar to 3-phosphoinositide dependent ...
PDPK1                 0.251   3-phosphoinositide dependent protein kinase-1 isoform...
LOC100287510          0.251   PREDICTED: hypothetical protein XP_002343452 
MARK2                 0.248   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.248   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.248   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.248   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.248   MAP/microtubule affinity-regulating kinase 2 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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