Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AURKB Sequence: fasta or formatted (344aa) NCBI GI: 83776600
Description:

aurora kinase B

Referenced in:

Centromere Proteins
Coiled-Coil Proteins
Protease Inhibitors
Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         22           2
 C cysteine            1.5          5           1
 D aspartate           3.5         12           2
 E glutamate           7.3         25           2
 F phenylalanine       2.9         10           1
 G glycine             5.5         19           1
 H histidine           3.8         13           2
 I isoleucine          5.2         18           1
 K lysine              6.4         22           2
 L leucine            11.6         40           3
 M methionine          2.6          9           1
 N asparagine          3.5         12           1
 P proline             7.3         25           2
 Q glutamine           3.8         13           1
 R arginine            7.6         26           3
 S serine              6.4         22           2
 T threonine           3.8         13           1
 V valine              6.1         21           1
 W tryptophan          1.2          4           1
 Y tyrosine            3.8         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aurora kinase B 
AURKC                 0.669   aurora kinase C isoform 1 
AURKC                 0.667   aurora kinase C isoform 3 
AURKC                 0.667   aurora kinase C isoform 2 
AURKA                 0.564   serine/threonine protein kinase 6 
AURKA                 0.564   serine/threonine protein kinase 6 
AURKA                 0.564   serine/threonine protein kinase 6 
AURKA                 0.564   serine/threonine protein kinase 6 
AURKA                 0.564   serine/threonine protein kinase 6 
AURKA                 0.564   serine/threonine protein kinase 6 
PLK4                  0.246   polo-like kinase 4 
LOC100293250          0.214   PREDICTED: similar to 3-phosphoinositide dependent ...
PDPK1                 0.213   3-phosphoinositide dependent protein kinase-1 isoform...
LOC100287510          0.213   PREDICTED: hypothetical protein XP_002343452 
NUAK1                 0.213   AMPK-related protein kinase 5 
PRKCH                 0.207   protein kinase C, eta 
RPS6KB1               0.207   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
PRKX                  0.207   protein kinase, X-linked 
QSK                   0.206   serine/threonine-protein kinase QSK 
AKT3                  0.206   AKT3 kinase isoform 1 
AKT3                  0.206   AKT3 kinase isoform 2 
PLK2                  0.206   polo-like kinase 2 
RPS6KA6               0.204   ribosomal protein S6 kinase polypeptide 6 
PRKG2                 0.203   protein kinase, cGMP-dependent, type II 
ULK3                  0.203   unc-51-like kinase 3 
NUAK2                 0.201   NUAK family, SNF1-like kinase, 2 
PRKACG                0.201   protein kinase, cAMP-dependent, catalytic, gamma [Ho...
RPS6KA2               0.201   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.201   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
PLK3                  0.200   polo-like kinase 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press