Guide to the Human Genome
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Name: AURKC Sequence: fasta or formatted (275aa) NCBI GI: 62865643
Description:

aurora kinase C isoform 3

Referenced in:

Centromere Proteins

Other entries for this name:
alt prot [309aa] aurora kinase C isoform 1
alt prot [290aa] aurora kinase C isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         15           1
 C cysteine            1.8          5           1
 D aspartate           4.7         13           2
 E glutamate           8.4         23           2
 F phenylalanine       3.3          9           1
 G glycine             5.1         14           1
 H histidine           4.0         11           1
 I isoleucine          6.2         17           2
 K lysine              6.2         17           2
 L leucine            14.2         39           3
 M methionine          1.8          5           1
 N asparagine          1.5          4           1
 P proline             5.8         16           2
 Q glutamine           3.6         10           1
 R arginine            9.1         25           2
 S serine              4.4         12           1
 T threonine           3.3          9           1
 V valine              5.5         15           1
 W tryptophan          1.1          3           1
 Y tyrosine            4.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aurora kinase C isoform 3 
AURKC                 1.000   aurora kinase C isoform 2 
AURKC                 1.000   aurora kinase C isoform 1 
AURKB                 0.841   aurora kinase B 
AURKA                 0.692   serine/threonine protein kinase 6 
AURKA                 0.692   serine/threonine protein kinase 6 
AURKA                 0.692   serine/threonine protein kinase 6 
AURKA                 0.692   serine/threonine protein kinase 6 
AURKA                 0.692   serine/threonine protein kinase 6 
AURKA                 0.692   serine/threonine protein kinase 6 
PLK4                  0.293   polo-like kinase 4 
QSK                   0.285   serine/threonine-protein kinase QSK 
MARK3                 0.278   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.278   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.278   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.278   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK4                 0.276   MAP/microtubule affinity-regulating kinase 4 
STK36                 0.272   serine/threonine kinase 36 
MARK1                 0.272   MAP/microtubule affinity-regulating kinase 1 
NUAK1                 0.272   AMPK-related protein kinase 5 
SIK1                  0.269   SNF1-like kinase 
PRKCH                 0.269   protein kinase C, eta 
MARK2                 0.261   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.261   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.261   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.261   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.261   MAP/microtubule affinity-regulating kinase 2 isoform...
SIK2                  0.261   SNF1-like kinase 2 
AKT3                  0.259   AKT3 kinase isoform 1 
AKT3                  0.259   AKT3 kinase isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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