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Search of human proteins with 62243734
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62243734 signal transducing adaptor family member 2 isoform
1 [Homo sapiens]
(449 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62243734 signal transducing adaptor family member 2 isoform 1... 928 0.0
gi|62243769 signal transducing adaptor family member 2 isoform 2... 806 0.0
gi|6912272 signal transducing adaptor family member 1 [Homo sapi... 153 3e-37
gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens] 60 4e-09
gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens] 60 4e-09
gi|237858668 hypothetical protein LOC123207 isoform d [Homo sapi... 59 7e-09
gi|169213800 PREDICTED: hypothetical protein [Homo sapiens] 59 9e-09
gi|169214229 PREDICTED: hypothetical protein [Homo sapiens] 59 9e-09
gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo ... 59 9e-09
gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens] 59 9e-09
gi|169213573 PREDICTED: hypothetical protein [Homo sapiens] 59 9e-09
gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens] 59 1e-08
gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens] 58 2e-08
gi|28212280 hypothetical protein LOC283579 [Homo sapiens] 57 3e-08
gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sap... 57 4e-08
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 56 6e-08
gi|29029530 sulfotransferase family, cytosolic, 1C, member 1 iso... 56 8e-08
gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens] 55 1e-07
gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens] 55 1e-07
gi|54112407 protein kinase CHK2 isoform c [Homo sapiens] 54 3e-07
gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo sap... 54 4e-07
gi|224494572 hypothetical protein LOC401082 [Homo sapiens] 53 6e-07
gi|4506473 v-rel reticuloendotheliosis viral oncogene homolog [H... 53 6e-07
gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo sapi... 52 1e-06
gi|61744477 solute carrier family 3, member 2 isoform b [Homo sa... 52 1e-06
gi|61744475 solute carrier family 3, member 2 isoform a [Homo sa... 51 2e-06
gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens] 51 2e-06
gi|119964690 glycogenin 2 isoform b [Homo sapiens] 48 2e-05
gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo ... 47 3e-05
gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo ... 47 3e-05
>gi|62243734 signal transducing adaptor family member 2 isoform 1
[Homo sapiens]
Length = 449
Score = 928 bits (2398), Expect = 0.0
Identities = 449/449 (100%), Positives = 449/449 (100%)
Query: 1 MASALRPPRVPKPKGVLPSHYYESFLEKKGPCDRDYKKFWAGLQGLTIYFYNSNRDFQHV 60
MASALRPPRVPKPKGVLPSHYYESFLEKKGPCDRDYKKFWAGLQGLTIYFYNSNRDFQHV
Sbjct: 1 MASALRPPRVPKPKGVLPSHYYESFLEKKGPCDRDYKKFWAGLQGLTIYFYNSNRDFQHV 60
Query: 61 EKLNLGAFEKLTDEIPWGSSRDPGTHFSLILRDQEIKFKVETLECREMWKGFILTVVELR 120
EKLNLGAFEKLTDEIPWGSSRDPGTHFSLILRDQEIKFKVETLECREMWKGFILTVVELR
Sbjct: 61 EKLNLGAFEKLTDEIPWGSSRDPGTHFSLILRDQEIKFKVETLECREMWKGFILTVVELR 120
Query: 121 VPTDLTLLPGHLYMMSEVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPS 180
VPTDLTLLPGHLYMMSEVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPS
Sbjct: 121 VPTDLTLLPGHLYMMSEVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPS 180
Query: 181 GDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSHTKKA 240
GDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSHTKKA
Sbjct: 181 GDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSHTKKA 240
Query: 241 LVPFLLDEDYEKVLGYVEADKENGENVWVAPSAPGPGPAPCTGGPKPLSPASSQDKLPPL 300
LVPFLLDEDYEKVLGYVEADKENGENVWVAPSAPGPGPAPCTGGPKPLSPASSQDKLPPL
Sbjct: 241 LVPFLLDEDYEKVLGYVEADKENGENVWVAPSAPGPGPAPCTGGPKPLSPASSQDKLPPL 300
Query: 301 PPLPNQEENYVTPIGDGPAVDYENQDVASSSWPVILKPKKLPKPPAKLPKPPVGPKPVEK 360
PPLPNQEENYVTPIGDGPAVDYENQDVASSSWPVILKPKKLPKPPAKLPKPPVGPKPVEK
Sbjct: 301 PPLPNQEENYVTPIGDGPAVDYENQDVASSSWPVILKPKKLPKPPAKLPKPPVGPKPVEK 360
Query: 361 GFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSLPEPKVFNGGLGRKLPVSS 420
GFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSLPEPKVFNGGLGRKLPVSS
Sbjct: 361 GFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSLPEPKVFNGGLGRKLPVSS 420
Query: 421 AQPLFPTAGLADMTAELQKKLEKRRALEH 449
AQPLFPTAGLADMTAELQKKLEKRRALEH
Sbjct: 421 AQPLFPTAGLADMTAELQKKLEKRRALEH 449
>gi|62243769 signal transducing adaptor family member 2 isoform 2
[Homo sapiens]
Length = 403
Score = 806 bits (2082), Expect = 0.0
Identities = 401/449 (89%), Positives = 401/449 (89%), Gaps = 46/449 (10%)
Query: 1 MASALRPPRVPKPKGVLPSHYYESFLEKKGPCDRDYKKFWAGLQGLTIYFYNSNRDFQHV 60
MASALRPPRVPKPKGVLPSHYYESFLEKKGPCDRDYKKFWAGLQGLTIYFYNSNRDFQHV
Sbjct: 1 MASALRPPRVPKPKGVLPSHYYESFLEKKGPCDRDYKKFWAGLQGLTIYFYNSNRDFQHV 60
Query: 61 EKLNLGAFEKLTDEIPWGSSRDPGTHFSLILRDQEIKFKVETLECREMWKGFILTVVELR 120
EKLNLGAFEKLTDEIPWGSSRDPGTHFSLILRDQEIKFKVETLECREMWKGFILTVVELR
Sbjct: 61 EKLNLGAFEKLTDEIPWGSSRDPGTHFSLILRDQEIKFKVETLECREMWKGFILTVVELR 120
Query: 121 VPTDLTLLPGHLYMMSEVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPS 180
VPTDLTLLPGHLYMMSEVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPS
Sbjct: 121 VPTDLTLLPGHLYMMSEVLAKEEARRALETPSCFLKVSRLEAQLLLERYPECGNLLLRPS 180
Query: 181 GDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSHTKKA 240
GDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSHTKKA
Sbjct: 181 GDGADGVSVTTRQMHNGTHVVRHYKVKREGPKYVIDVEQPFSCTSLDAVVNYFVSHTKKA 240
Query: 241 LVPFLLDEDYEKVLGYVEADKENGENVWVAPSAPGPGPAPCTGGPKPLSPASSQDKLPPL 300
LVPFLLDEDYEKVLGYVEADKENGENVWVAPSAPGPGPAPCTGGPKPLSPASSQDKLPPL
Sbjct: 241 LVPFLLDEDYEKVLGYVEADKENGENVWVAPSAPGPGPAPCTGGPKPLSPASSQDKLPPL 300
Query: 301 PPLPNQEENYVTPIGDGPAVDYENQDVASSSWPVILKPKKLPKPPAKLPKPPVGPKPVEK 360
PPLPNQEENYVTPIGDGPAVDYENQDVASSSWPVILKPKKLPKPPAKLPKPPVGPKP K
Sbjct: 301 PPLPNQEENYVTPIGDGPAVDYENQDVASSSWPVILKPKKLPKPPAKLPKPPVGPKPEPK 360
Query: 361 GFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSLPEPKVFNGGLGRKLPVSS 420
VFNGGLGRKLPVSS
Sbjct: 361 ----------------------------------------------VFNGGLGRKLPVSS 374
Query: 421 AQPLFPTAGLADMTAELQKKLEKRRALEH 449
AQPLFPTAGLADMTAELQKKLEKRRALEH
Sbjct: 375 AQPLFPTAGLADMTAELQKKLEKRRALEH 403
>gi|6912272 signal transducing adaptor family member 1 [Homo
sapiens]
Length = 295
Score = 153 bits (386), Expect = 3e-37
Identities = 94/277 (33%), Positives = 148/277 (53%), Gaps = 38/277 (13%)
Query: 4 ALRPPRVPKPKGVLPSH--------YYESFLEKKGPCDRDYKKFWAGLQGLTIYFYNSNR 55
A +PP+ P P+ + Y+E FL K R+Y+ +W L+G T++FY +
Sbjct: 3 AKKPPK-PAPRRIFQERLKITALPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKK 61
Query: 56 DFQHVEKLNLGAFEKLTDEIPWGSSRDPGTHFSLILRDQEIKFKVETLECREMWKGFILT 115
+V+KL++ LT++ S+ F+L+L +E++ K E E E W+GFILT
Sbjct: 62 SIIYVDKLDIVDLTCLTEQ---NSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILT 118
Query: 116 VVELRVPTDLTLLPGHLYMMSEVLAKEEARRALET-----------------------PS 152
V EL VP +++LLPG + + EVL +E+ RR +ET P+
Sbjct: 119 VTELSVPQNVSLLPGQVIKLHEVLEREKKRR-IETEQSTSVEKEKEPTEDYVDVLNPMPA 177
Query: 153 CFLKVSRLEAQLLLERYPECGNLLLRPSGDGADGVSVTTRQMHNGTHVVRHYKVKREGPK 212
CF VSR EA +L++ P GN++LRP D + S+T RQ + ++HYKV G
Sbjct: 178 CFYTVSRKEATEMLQKNPSLGNMILRPGSDSRN-YSITIRQEIDIPR-IKHYKVMSVGQN 235
Query: 213 YVIDVEQPFSCTSLDAVVNYFVSHTKKALVPFLLDED 249
Y I++E+P + +L +V++YFV T+ L PF+ D
Sbjct: 236 YTIELEKPVTLPNLFSVIDYFVKETRGNLRPFICSTD 272
>gi|169216486 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 60.1 bits (144), Expect = 4e-09
Identities = 33/45 (73%), Positives = 33/45 (73%)
Query: 358 VEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSL 402
VE F HV QAGLELL S DPPTSASQSAGITGVSH P L L
Sbjct: 354 VETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARPVLCVL 398
>gi|169216528 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 60.1 bits (144), Expect = 4e-09
Identities = 33/45 (73%), Positives = 33/45 (73%)
Query: 358 VEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSL 402
VE F HV QAGLELL S DPPTSASQSAGITGVSH P L L
Sbjct: 354 VETVFLHVDQAGLELLISGDPPTSASQSAGITGVSHWARPVLCVL 398
>gi|237858668 hypothetical protein LOC123207 isoform d [Homo
sapiens]
Length = 167
Score = 59.3 bits (142), Expect = 7e-09
Identities = 30/39 (76%), Positives = 32/39 (82%)
Query: 361 GFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHL 399
G ++AQAGLELL SSD P SASQSAGITGVSHHT P L
Sbjct: 124 GSCYIAQAGLELLASSDLPASASQSAGITGVSHHTQPAL 162
>gi|169213800 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 58.9 bits (141), Expect = 9e-09
Identities = 28/33 (84%), Positives = 30/33 (90%)
Query: 361 GFHHVAQAGLELLTSSDPPTSASQSAGITGVSH 393
G +HV QAGLELLTSSDPPTSASQ+A ITGVSH
Sbjct: 2 GLYHVGQAGLELLTSSDPPTSASQNAEITGVSH 34
>gi|169214229 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 58.9 bits (141), Expect = 9e-09
Identities = 28/33 (84%), Positives = 30/33 (90%)
Query: 361 GFHHVAQAGLELLTSSDPPTSASQSAGITGVSH 393
G +HV QAGLELLTSSDPPTSASQ+A ITGVSH
Sbjct: 2 GLYHVGQAGLELLTSSDPPTSASQNAEITGVSH 34
>gi|239747074 PREDICTED: hypothetical protein XP_002343911 [Homo
sapiens]
Length = 402
Score = 58.9 bits (141), Expect = 9e-09
Identities = 32/45 (71%), Positives = 33/45 (73%)
Query: 358 VEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSL 402
VE F HV QAGLELL S DPPTSASQSAGITGV+H P L L
Sbjct: 354 VETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARPVLCVL 398
>gi|169216761 PREDICTED: hCG_1742852 [Homo sapiens]
Length = 402
Score = 58.9 bits (141), Expect = 9e-09
Identities = 32/45 (71%), Positives = 33/45 (73%)
Query: 358 VEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSL 402
VE F HV QAGLELL S DPPTSASQSAGITGV+H P L L
Sbjct: 354 VETVFLHVDQAGLELLISGDPPTSASQSAGITGVTHWARPVLCVL 398
>gi|169213573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 142
Score = 58.9 bits (141), Expect = 9e-09
Identities = 28/33 (84%), Positives = 30/33 (90%)
Query: 361 GFHHVAQAGLELLTSSDPPTSASQSAGITGVSH 393
G +HV QAGLELLTSSDPPTSASQ+A ITGVSH
Sbjct: 2 GLYHVGQAGLELLTSSDPPTSASQNAEITGVSH 34
>gi|194473995 zinc finger protein 195 isoform 2 [Homo sapiens]
Length = 606
Score = 58.5 bits (140), Expect = 1e-08
Identities = 39/92 (42%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 343 KPPAKLPKPPVGPKPVEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSL 402
K P + + E GFHH QA LELL SSD P SASQSAGITGV+H P L
Sbjct: 60 KEPWNVKRQEAADGHPEMGFHHATQACLELLGSSDLPASASQSAGITGVNHRAQPGL--- 116
Query: 403 PEPKVFNGGLGRKLPVSS--AQPLFPTAGLAD 432
N + + +SS Q L P G+ D
Sbjct: 117 ------NVSVDKFTAMSSHFTQDLLPEQGIQD 142
>gi|194473688 zinc finger protein 195 isoform 1 [Homo sapiens]
Length = 629
Score = 58.2 bits (139), Expect = 2e-08
Identities = 31/58 (53%), Positives = 35/58 (60%)
Query: 343 KPPAKLPKPPVGPKPVEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLS 400
K P + + E GFHH QA LELL SSD P SASQSAGITGV+H P L+
Sbjct: 60 KEPWNVKRQEAADGHPEMGFHHATQACLELLGSSDLPASASQSAGITGVNHRAQPGLN 117
>gi|28212280 hypothetical protein LOC283579 [Homo sapiens]
Length = 122
Score = 57.4 bits (137), Expect = 3e-08
Identities = 29/39 (74%), Positives = 31/39 (79%)
Query: 359 EKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWP 397
E G H+ AQAGLELL SS+PP SASQSAGITGVSH P
Sbjct: 30 EMGSHYFAQAGLELLGSSNPPASASQSAGITGVSHCARP 68
>gi|33188429 tetratricopeptide repeat protein isoform 1 [Homo sapiens]
Length = 1079
Score = 56.6 bits (135), Expect = 4e-08
Identities = 29/37 (78%), Positives = 29/37 (78%)
Query: 358 VEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHH 394
VE GFHHV QA LELLTS SASQSAGITGVSHH
Sbjct: 1041 VETGFHHVGQACLELLTSGGLLASASQSAGITGVSHH 1077
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 56.2 bits (134), Expect = 6e-08
Identities = 28/32 (87%), Positives = 28/32 (87%)
Query: 358 VEKGFHHVAQAGLELLTSSDPPTSASQSAGIT 389
VE GFHHV QAGLELL SSD PTSASQSAGIT
Sbjct: 37 VEMGFHHVGQAGLELLISSDLPTSASQSAGIT 68
>gi|29029530 sulfotransferase family, cytosolic, 1C, member 1
isoform b [Homo sapiens]
Length = 307
Score = 55.8 bits (133), Expect = 8e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 355 PKPVEKGFHHVAQAGLELLTSSDPPTSASQSAGIT 389
P+P E GFHHVAQAGL+LL+SS+PP S SQSA IT
Sbjct: 89 PQPSETGFHHVAQAGLKLLSSSNPPASTSQSAKIT 123
>gi|66277202 podocalyxin-like isoform 1 precursor [Homo sapiens]
Length = 558
Score = 55.5 bits (132), Expect = 1e-07
Identities = 50/143 (34%), Positives = 58/143 (40%), Gaps = 21/143 (14%)
Query: 285 PKPLSPASSQDKLPPLPPLPNQEENYVTPIGDGPAVDYENQDVASSSWPVILKPKKLPKP 344
P P SP S P P TP G D+ + +SSS I P
Sbjct: 181 PHPTSPLS--------PRQPTSTHPVATPTSSGH--DHLMKISSSSSTVAI--------P 222
Query: 345 PAKLPKPPVGPKPVEKGFHHVAQAGLELLTSSDPPTSASQSAGITG---VSHHTWPHLSS 401
P + +E FHHV+QAGLELLTS D PT ASQSAGIT +S T S
Sbjct: 223 GYTFTSPGMTTTLLETVFHHVSQAGLELLTSGDLPTLASQSAGITASSVISQRTQQTSSQ 282
Query: 402 LPEPKVFNGGLGRKLPVSSAQPL 424
+P P S A L
Sbjct: 283 MPASSTAPSSQETVQPTSPATAL 305
>gi|63999355 chromosome 9 open reading frame 37 [Homo sapiens]
Length = 176
Score = 55.5 bits (132), Expect = 1e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Query: 362 FHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWP 397
FH+VAQA LELLTSS+PP SASQS GITG SH P
Sbjct: 3 FHYVAQADLELLTSSNPPASASQSTGITGGSHRARP 38
>gi|54112407 protein kinase CHK2 isoform c [Homo sapiens]
Length = 586
Score = 53.9 bits (128), Expect = 3e-07
Identities = 31/56 (55%), Positives = 34/56 (60%)
Query: 342 PKPPAKLPKPPVGPKPVEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWP 397
P P A+L G +E HV Q+ LELL SSDPP SASQSAGI GV HH P
Sbjct: 90 PAPWARLWALQDGFANLETESGHVTQSDLELLLSSDPPASASQSAGIRGVRHHPRP 145
>gi|195963398 suppressor of G2 allele of SKP1 isoform a [Homo
sapiens]
Length = 365
Score = 53.5 bits (127), Expect = 4e-07
Identities = 25/33 (75%), Positives = 27/33 (81%)
Query: 358 VEKGFHHVAQAGLELLTSSDPPTSASQSAGITG 390
+E GFH V QAGL+LLTSSDPP SQSAGITG
Sbjct: 110 IETGFHRVGQAGLQLLTSSDPPALDSQSAGITG 142
>gi|224494572 hypothetical protein LOC401082 [Homo sapiens]
Length = 95
Score = 52.8 bits (125), Expect = 6e-07
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 354 GPKPVEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPHLSSLP 403
G + +E G H+VAQAGLELL SS+ PTSA Q+AG TG+ H T P +P
Sbjct: 9 GCEHLEDGSHYVAQAGLELLGSSNSPTSAYQAAGTTGLHHCTPPIQVHIP 58
>gi|4506473 v-rel reticuloendotheliosis viral oncogene homolog [Homo
sapiens]
Length = 619
Score = 52.8 bits (125), Expect = 6e-07
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 15/86 (17%)
Query: 358 VEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHHTWPH---LSSLPEPKVF------ 408
VE GF HV Q GLELLTS DPPT ASQSAGIT V+ P L S+ E + F
Sbjct: 308 VETGFRHVDQDGLELLTSGDPPTLASQSAGIT-VNFPERPRPGLLGSIGEGRYFKKEPNL 366
Query: 409 --NGGLGRKLPV---SSAQPLFPTAG 429
+ + R++P S A+ +P+ G
Sbjct: 367 FSHDAVVREMPTGVSSQAESYYPSPG 392
>gi|148664240 hypothetical protein LOC146556 isoform 1 [Homo
sapiens]
Length = 440
Score = 52.0 bits (123), Expect = 1e-06
Identities = 24/31 (77%), Positives = 25/31 (80%)
Query: 358 VEKGFHHVAQAGLELLTSSDPPTSASQSAGI 388
VE GFHHVA AGLELL S DPPTS SQS G+
Sbjct: 410 VETGFHHVAHAGLELLISRDPPTSGSQSVGL 440
>gi|61744477 solute carrier family 3, member 2 isoform b [Homo
sapiens]
Length = 631
Score = 51.6 bits (122), Expect = 1e-06
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 358 VEKGFHHVAQAGLELLTSSDPPTSASQSAGITG-VSHHTWPHLSSL------PEPKVFNG 410
VE GFHHV+QA +E LTS DP SAS SAGITG +S T + + PE + N
Sbjct: 69 VETGFHHVSQADIEFLTSIDPTASASGSAGITGTMSQDTEVDMKEVELNELEPEKQPMNA 128
Query: 411 GLGRKLPVSSAQ 422
G + ++ A+
Sbjct: 129 ASGAAMSLAGAE 140
Score = 36.6 bits (83), Expect = 0.048
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 359 EKGFHHVAQAGLELLTSSDPPTSASQSAGIT 389
E G V QAGL+LL SSDPP AS++A +T
Sbjct: 38 ETGSDCVTQAGLQLLASSDPPALASKNAEVT 68
>gi|61744475 solute carrier family 3, member 2 isoform a [Homo
sapiens]
Length = 661
Score = 51.2 bits (121), Expect = 2e-06
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 10/86 (11%)
Query: 344 PPAKLPKPPVGPKPVEKGFHHVAQAGLELLTSSDPPTSASQSAGITG-VSHHTWPHLSSL 402
PPA K + E GFHHV+QA +E LTS DP SAS SAGITG +S T + +
Sbjct: 88 PPALASK---NAEVTETGFHHVSQADIEFLTSIDPTASASGSAGITGTMSQDTEVDMKEV 144
Query: 403 ------PEPKVFNGGLGRKLPVSSAQ 422
PE + N G + ++ A+
Sbjct: 145 ELNELEPEKQPMNAASGAAMSLAGAE 170
Score = 41.6 bits (96), Expect = 0.001
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 348 LPKPPVGPKPVEKGFHHVAQAGLELLTSSDPPTSASQSAGITGVSHH 394
LP + +E G V QAGL+LL SSDPP AS++A +T H
Sbjct: 58 LPSASQNAEMIETGSDCVTQAGLQLLASSDPPALASKNAEVTETGFH 104
Score = 36.6 bits (83), Expect = 0.048
Identities = 19/28 (67%), Positives = 20/28 (71%)
Query: 359 EKGFHHVAQAGLELLTSSDPPTSASQSA 386
E G H VAQ GLELL S DP SASQ+A
Sbjct: 38 ELGSHCVAQTGLELLASGDPLPSASQNA 65
>gi|239751420 PREDICTED: similar to hCG2039376 [Homo sapiens]
Length = 858
Score = 50.8 bits (120), Expect = 2e-06
Identities = 25/32 (78%), Positives = 26/32 (81%)
Query: 365 VAQAGLELLTSSDPPTSASQSAGITGVSHHTW 396
VAQAGLELL SS P ASQSAGITG+SH TW
Sbjct: 701 VAQAGLELLVSSSPSALASQSAGITGMSHCTW 732
>gi|119964690 glycogenin 2 isoform b [Homo sapiens]
Length = 501
Score = 48.1 bits (113), Expect = 2e-05
Identities = 24/31 (77%), Positives = 26/31 (83%)
Query: 359 EKGFHHVAQAGLELLTSSDPPTSASQSAGIT 389
E FHH AQAGLELL SS+ PTSASQSAG+T
Sbjct: 3 ETEFHHGAQAGLELLRSSNSPTSASQSAGMT 33
>gi|169213867 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 47.4 bits (111), Expect = 3e-05
Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 367 QAGLELLTSSDPPTSASQSAGITGVSHHTWPH-----LSSLPEPKVFNGG 411
QAG++LLT+SD PT ASQS ITGVSHH P+ SS K F+ G
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRG 236
>gi|169214305 PREDICTED: hypothetical protein LOC100128682 [Homo
sapiens]
Length = 299
Score = 47.4 bits (111), Expect = 3e-05
Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 367 QAGLELLTSSDPPTSASQSAGITGVSHHTWPH-----LSSLPEPKVFNGG 411
QAG++LLT+SD PT ASQS ITGVSHH P+ SS K F+ G
Sbjct: 187 QAGVKLLTASDLPTLASQSVAITGVSHHAQPNPLIFCFSSSTVRKAFDRG 236
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,875,635
Number of Sequences: 37866
Number of extensions: 1283283
Number of successful extensions: 8313
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 452
Number of HSP's that attempted gapping in prelim test: 6254
Number of HSP's gapped (non-prelim): 1947
length of query: 449
length of database: 18,247,518
effective HSP length: 106
effective length of query: 343
effective length of database: 14,233,722
effective search space: 4882166646
effective search space used: 4882166646
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.