Guide to the Human Genome
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Name: STAP1 Sequence: fasta or formatted (295aa) NCBI GI: 6912272
Description:

signal transducing adaptor family member 1

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.4          7           1
 C cysteine            1.4          4           1
 D aspartate           3.4         10           1
 E glutamate          11.2         33           2
 F phenylalanine       3.7         11           2
 G glycine             4.1         12           1
 H histidine           1.4          4           1
 I isoleucine          6.4         19           2
 K lysine              8.8         26           2
 L leucine             9.5         28           2
 M methionine          2.4          7           2
 N asparagine          4.4         13           1
 P proline             6.4         19           2
 Q glutamine           3.4         10           1
 R arginine            6.1         18           2
 S serine              6.1         18           1
 T threonine           8.1         24           2
 V valine              6.1         18           1
 W tryptophan          0.7          2           1
 Y tyrosine            4.1         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   signal transducing adaptor family member 1 
STAP2                 0.225   signal transducing adaptor family member 2 isoform 2...
STAP2                 0.225   signal transducing adaptor family member 2 isoform 1...
DGKH                  0.042   diacylglycerol kinase, eta isoform 1 
DGKH                  0.042   diacylglycerol kinase, eta isoform 2 
DGKD                  0.035   diacylglycerol kinase, delta 130kDa isoform 1 
DGKD                  0.035   diacylglycerol kinase, delta 130kDa isoform 2 
SRMS                  0.021   src-related kinase lacking C-terminal regulatory tyr...
MYST3                 0.019   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.019   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.019   MYST histone acetyltransferase (monocytic leukemia)...
PLCG2                 0.018   phospholipase C, gamma 2 
TOM1                  0.016   target of myb1 isoform 2 
TOM1                  0.016   target of myb1 isoform 4 
TOM1                  0.016   target of myb1 isoform 3 
TOM1                  0.016   target of myb1 isoform 1 
TIAM1                 0.014   T-cell lymphoma invasion and metastasis 1 
ARHGAP22              0.012   Rho GTPase activating protein 2 
GOLGB1                0.012   golgi autoantigen, golgin subfamily b, macrogolgin ...
TTC1                  0.012   tetratricopeptide repeat domain 1 
ANK2                  0.011   ankyrin 2 isoform 1 
FN1                   0.011   fibronectin 1 isoform 3 preproprotein 
FN1                   0.011   fibronectin 1 isoform 1 preproprotein 
FN1                   0.011   fibronectin 1 isoform 4 preproprotein 
FN1                   0.011   fibronectin 1 isoform 5 preproprotein 
FN1                   0.011   fibronectin 1 isoform 2 preproprotein 
FN1                   0.011   fibronectin 1 isoform 6 preproprotein 
PLCE1                 0.009   phospholipase C, epsilon 1 
RSBN1                 0.009   round spermatid basic protein 1 
DEF6                  0.009   differentially expressed in FDCP 6 homolog 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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