Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 13487904
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1
[Homo sapiens]
(144 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1 [Hom... 305 7e-84
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 85 2e-17
gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo sa... 80 5e-16
gi|239745289 PREDICTED: hypothetical protein XP_002343419 isofor... 80 5e-16
gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens] 70 8e-13
gi|239745266 PREDICTED: similar to cis-Golgi matrix protein GM13... 69 2e-12
gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo sap... 65 2e-11
gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo sa... 62 2e-10
gi|239745291 PREDICTED: hypothetical protein XP_002343418 isofor... 62 2e-10
gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo sapi... 61 3e-10
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l... 55 2e-08
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l... 55 2e-08
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l... 55 2e-08
gi|239750924 PREDICTED: similar to Putative golgin subfamily A m... 55 2e-08
gi|239745322 PREDICTED: similar to Putative golgin subfamily A m... 55 2e-08
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l... 53 8e-08
gi|113425119 PREDICTED: similar to golgi autoantigen, golgin sub... 53 1e-07
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l... 51 3e-07
gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo s... 50 5e-07
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l... 50 9e-07
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein... 50 9e-07
gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein... 50 9e-07
gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-l... 49 1e-06
gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo sap... 47 4e-06
gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo sapi... 47 4e-06
gi|60218906 golgi autoantigen, golgin subfamily a, 8F [Homo sapi... 46 9e-06
gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens] 45 2e-05
gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens] 45 2e-05
gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Hom... 44 4e-05
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 39 0.002
>gi|13487904 golgi autoantigen, golgin subfamily a, 2-like 1 [Homo
sapiens]
Length = 144
Score = 305 bits (782), Expect = 7e-84
Identities = 144/144 (100%), Positives = 144/144 (100%)
Query: 1 MDSEEEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICW 60
MDSEEEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICW
Sbjct: 1 MDSEEEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICW 60
Query: 61 PRPRRNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGGGVHQQAG 120
PRPRRNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGGGVHQQAG
Sbjct: 61 PRPRRNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGGGVHQQAG 120
Query: 121 PGQGRGEGEAAGAGVACGRLQQVA 144
PGQGRGEGEAAGAGVACGRLQQVA
Sbjct: 121 PGQGRGEGEAAGAGVACGRLQQVA 144
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 85.1 bits (209), Expect = 2e-17
Identities = 56/110 (50%), Positives = 63/110 (57%), Gaps = 24/110 (21%)
Query: 2 DSEEEEE----VPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKE----CTA 53
D EEEEE VPQPMPSIPEDLES++AMVAFFNSAVASAEEEQARL GQLKE C
Sbjct: 708 DEEEEEEEAVAVPQPMPSIPEDLESREAMVAFFNSAVASAEEEQARLRGQLKEQRVRCRR 767
Query: 54 SAWLICWPRPRRNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTV 103
A L+ Q +P+ P G + CG HR +
Sbjct: 768 LAHLLA--------SAQKEPEAAAPAPGTGGDS--------VCGETHRAL 801
>gi|169209083 PREDICTED: similar to hCG2004312 isoform 1 [Homo
sapiens]
Length = 230
Score = 80.5 bits (197), Expect = 5e-16
Identities = 51/130 (39%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 4 EEEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRP 63
+ E+E P+PMP+IP DLES++AMVAFFNSA A+A+EEQ C L AS+
Sbjct: 91 DSEQEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASS-------Q 143
Query: 64 RRNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGGGVHQQAGPGQ 123
++ P P+ G C G + +G + + + G G H+QAGPG
Sbjct: 144 KKPEVAAPAPETGGESVC-GETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGP 202
Query: 124 GRGEGEAAGA 133
G EGE AGA
Sbjct: 203 GGDEGEPAGA 212
>gi|239745289 PREDICTED: hypothetical protein XP_002343419 isoform 2
[Homo sapiens]
Length = 230
Score = 80.5 bits (197), Expect = 5e-16
Identities = 51/130 (39%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 4 EEEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRP 63
+ E+E P+PMP+IP DLES++AMVAFFNSA A+A+EEQ C L AS+
Sbjct: 91 DSEQEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASS-------Q 143
Query: 64 RRNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGGGVHQQAGPGQ 123
++ P P+ G C G + +G + + + G G H+QAGPG
Sbjct: 144 KKPEVAAPAPETGGESVC-GETHQALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGP 202
Query: 124 GRGEGEAAGA 133
G EGE AGA
Sbjct: 203 GGDEGEPAGA 212
>gi|239745297 PREDICTED: similar to hCG2004312 [Homo sapiens]
Length = 131
Score = 69.7 bits (169), Expect = 8e-13
Identities = 49/121 (40%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 13 MPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPRRNLRQQPQ 72
MP+IP DLES++AMVAFFNSA ASA+EEQ C L AS+ ++ P
Sbjct: 1 MPNIPGDLESREAMVAFFNSAGASAQEEQRVCCQPLAHPVASS-------QKKPEVAAPA 53
Query: 73 PQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGGGVHQQAGPGQGRGEGEAAG 132
P E G G R +G + + + G G H+QAGPG G EGE AG
Sbjct: 54 P-ESGGESVFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAG 112
Query: 133 A 133
A
Sbjct: 113 A 113
>gi|239745266 PREDICTED: similar to cis-Golgi matrix protein GM130
[Homo sapiens]
Length = 131
Score = 68.6 bits (166), Expect = 2e-12
Identities = 48/121 (39%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 13 MPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPRRNLRQQPQ 72
MP+IP DLES++AMVAFFNSA A+A+EEQ C L AS+ ++ P
Sbjct: 1 MPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASS-------QKKPEVAAPA 53
Query: 73 PQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGGGVHQQAGPGQGRGEGEAAG 132
P E G G R +G + + + G G H+QAGPG G EGE AG
Sbjct: 54 P-ESGGESVFGETHRALQGAMEKLQESTSARGQCQRRSTGRGGHRQAGPGPGGDEGEPAG 112
Query: 133 A 133
A
Sbjct: 113 A 113
>gi|194578896 golgi autoantigen, golgin subfamily a, 8E [Homo
sapiens]
Length = 430
Score = 65.1 bits (157), Expect = 2e-11
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 43/140 (30%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPR 64
E EE P+PMPS+PEDLES++AM F + EE+A
Sbjct: 230 EGEEAPRPMPSVPEDLESREAMSGFMDHL-----EEKA---------------------- 262
Query: 65 RNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEG---GGVHQQAGP 121
+L + + +ELG R +V+ + +P GSA+ GG H QAGP
Sbjct: 263 -DLSELVEKEELGFFQYYRE---------RCHQKVYHPITKPGGSAKDAAPGGGHHQAGP 312
Query: 122 GQGRGEGEAAGA---GVACG 138
GQG EGEAAGA GVA G
Sbjct: 313 GQGGDEGEAAGAAGDGVAAG 332
>gi|239756378 PREDICTED: similar to hCG2004312 isoform 2 [Homo
sapiens]
Length = 185
Score = 61.6 bits (148), Expect = 2e-10
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 4 EEEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASA 55
+ E+E P+PMP+IP DLES++AMVAFFNSA A+A+EEQ C L AS+
Sbjct: 91 DSEQEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASS 142
>gi|239745291 PREDICTED: hypothetical protein XP_002343418 isoform 1
[Homo sapiens]
Length = 185
Score = 61.6 bits (148), Expect = 2e-10
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 4 EEEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASA 55
+ E+E P+PMP+IP DLES++AMVAFFNSA A+A+EEQ C L AS+
Sbjct: 91 DSEQEAPRPMPNIPGDLESREAMVAFFNSAGANAQEEQRVCCQPLAHPVASS 142
>gi|60218910 golgi autoantigen, golgin subfamily a, 8G [Homo
sapiens]
Length = 434
Score = 61.2 bits (147), Expect = 3e-10
Identities = 49/140 (35%), Positives = 66/140 (47%), Gaps = 43/140 (30%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPR 64
E +E P+P+PSIP+DLES++AM F + EE+A
Sbjct: 234 EGKEAPRPIPSIPQDLESREAMSGFMDHL-----EEKA---------------------- 266
Query: 65 RNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEG---GGVHQQAGP 121
+L + + +ELG R +V+ + +P GSA+ GG H QAGP
Sbjct: 267 -DLSELVEKEELGFFQYYRE---------RCHQKVYHPITKPGGSAKDAAPGGGHHQAGP 316
Query: 122 GQGRGEGEAAGA---GVACG 138
GQG EGEAAGA GVA G
Sbjct: 317 GQGGDEGEAAGAAGDGVAAG 336
>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 55.5 bits (132), Expect = 2e-08
Identities = 48/134 (35%), Positives = 61/134 (45%), Gaps = 45/134 (33%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPR 64
E EE PQPMPS+PEDLES++AM +F + LKE +
Sbjct: 435 EGEEAPQPMPSVPEDLESREAMSSFMD---------------HLKE-------------K 466
Query: 65 RNLRQQPQPQELGVIPCVGRPTRPCRGPW--RSCGRVHRTVPEPEGSAEG---GGVHQQA 119
+L + + QEL I W R ++H + EP G A+ GG H QA
Sbjct: 467 ADLSELVKKQELRFIQY-----------WQERCHQKIHHLLSEPGGRAKDAALGGGHHQA 515
Query: 120 GPGQGRGEGEAAGA 133
G QG EGEAAGA
Sbjct: 516 G-AQGGDEGEAAGA 528
>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 630
Score = 55.5 bits (132), Expect = 2e-08
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 42/132 (31%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPR 64
E EE PQPMPS+PEDLES++AM +F + +E+A L +K+ +C+
Sbjct: 434 EGEEAPQPMPSVPEDLESREAMSSFMDHL-----KEKADLSELVKK------ELCFIHHW 482
Query: 65 RNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEG---GGVHQQAGP 121
R+ R Q + H + EP G A+ GG H QAG
Sbjct: 483 RDRRHQ---------------------------KTHHLLSEPGGCAKDAALGGGHHQAG- 514
Query: 122 GQGRGEGEAAGA 133
QG EGEAAGA
Sbjct: 515 AQGGDEGEAAGA 526
>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 4 [Homo sapiens]
Length = 632
Score = 55.5 bits (132), Expect = 2e-08
Identities = 48/134 (35%), Positives = 61/134 (45%), Gaps = 45/134 (33%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPR 64
E EE PQPMPS+PEDLES++AM +F + LKE +
Sbjct: 435 EGEEAPQPMPSVPEDLESREAMSSFMD---------------HLKE-------------K 466
Query: 65 RNLRQQPQPQELGVIPCVGRPTRPCRGPW--RSCGRVHRTVPEPEGSAEG---GGVHQQA 119
+L + + QEL I W R ++H + EP G A+ GG H QA
Sbjct: 467 ADLSELVKKQELRFIQY-----------WQERCHQKIHHLLSEPGGRAKDAALGGGHHQA 515
Query: 120 GPGQGRGEGEAAGA 133
G QG EGEAAGA
Sbjct: 516 G-AQGGDEGEAAGA 528
>gi|239750924 PREDICTED: similar to Putative golgin subfamily A
member 2-like protein 5 [Homo sapiens]
Length = 110
Score = 55.1 bits (131), Expect = 2e-08
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 13 MPSIPEDLESQKAMVAFFNSAVASAEEE-QARLCGQLKECTASAWLICWPRPRRNLRQQP 71
MPSI EDL+S++AMVAF NSA+ SAEEE QA+L GQLKE + P Q
Sbjct: 1 MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHP----VALAQK 56
Query: 72 QPQELGVIPCVGRPTRPCRGPWRSCGRVHRTV 103
+P+ P G + +CG HR V
Sbjct: 57 EPEAAAPTPRTGGDS--------ACGETHRAV 80
>gi|239745322 PREDICTED: similar to Putative golgin subfamily A
member 2-like protein 5 [Homo sapiens]
Length = 110
Score = 55.1 bits (131), Expect = 2e-08
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 13 MPSIPEDLESQKAMVAFFNSAVASAEEE-QARLCGQLKECTASAWLICWPRPRRNLRQQP 71
MPSI EDL+S++AMVAF NSA+ SAEEE QA+L GQLKE + P Q
Sbjct: 1 MPSILEDLKSREAMVAFLNSALVSAEEEQQAQLHGQLKEQRVCCQHLAHP----VALAQK 56
Query: 72 QPQELGVIPCVGRPTRPCRGPWRSCGRVHRTV 103
+P+ P G + +CG HR V
Sbjct: 57 EPEAAAPTPRTGGDS--------ACGETHRAV 80
>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 53.1 bits (126), Expect = 8e-08
Identities = 47/132 (35%), Positives = 60/132 (45%), Gaps = 41/132 (31%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPR 64
E EE PQPMPS+PED ES++AM +F + EE+A L +K +
Sbjct: 435 EGEEAPQPMPSVPEDPESREAMSSFMDHL-----EEKADLSELVK--------------K 475
Query: 65 RNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEG---GGVHQQAGP 121
+ LR QE R ++H + EP G A+ GG H QAG
Sbjct: 476 QELRFIQYWQE------------------RCHQKIHHLLSEPGGRAKDAALGGGHHQAG- 516
Query: 122 GQGRGEGEAAGA 133
QG EGEAAGA
Sbjct: 517 AQGGDEGEAAGA 528
>gi|113425119 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 8E isoform 2 [Homo sapiens]
Length = 631
Score = 52.8 bits (125), Expect = 1e-07
Identities = 47/132 (35%), Positives = 60/132 (45%), Gaps = 41/132 (31%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPR 64
E EE PQPMPS+PED ES++AM +F + +E+A L LK +
Sbjct: 434 EGEEAPQPMPSVPEDPESREAMSSFMDHL-----KEKADLSELLK--------------K 474
Query: 65 RNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEG---GGVHQQAGP 121
+ LR QE R ++H + EP G A+ GG H QAG
Sbjct: 475 QELRFIQYWQE------------------RCHQKIHHLLSEPGGRAKDAALGGGHHQAG- 515
Query: 122 GQGRGEGEAAGA 133
QG EGEAAGA
Sbjct: 516 AQGGDEGEAAGA 527
>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 51.2 bits (121), Expect = 3e-07
Identities = 46/134 (34%), Positives = 60/134 (44%), Gaps = 45/134 (33%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPR 64
E EE P+PMPS+PED ES++AM +F + LKE +
Sbjct: 435 EGEEAPRPMPSVPEDPESREAMSSFMD---------------HLKE-------------K 466
Query: 65 RNLRQQPQPQELGVIPCVGRPTRPCRGPW--RSCGRVHRTVPEPEGSAEG---GGVHQQA 119
+L + + QEL I W R ++H + EP G A+ GG H QA
Sbjct: 467 ADLSELVKKQELRFIQY-----------WQERCHQKIHHLLSEPGGRAKDAALGGGHHQA 515
Query: 120 GPGQGRGEGEAAGA 133
G QG EGEAAGA
Sbjct: 516 G-AQGGDEGEAAGA 528
>gi|239745140 PREDICTED: similar to hect domain and RLD 2 [Homo
sapiens]
Length = 1052
Score = 50.4 bits (119), Expect = 5e-07
Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 41/130 (31%)
Query: 7 EEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPRRN 66
EE P+PMPS+PEDLES++AM +F + EE+A L +K+ +C+ R+
Sbjct: 479 EEAPRPMPSVPEDLESREAMSSFMDQL-----EEKADLSELVKKKE-----LCFIHHWRD 528
Query: 67 LRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEGG---GVHQQAGPGQ 123
Q ++H + EP G A+ G H QAG Q
Sbjct: 529 RCHQ---------------------------KIHHLLSEPGGRAKDAALVGGHHQAG-AQ 560
Query: 124 GRGEGEAAGA 133
G EGEAAGA
Sbjct: 561 GGDEGEAAGA 570
>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 49.7 bits (117), Expect = 9e-07
Identities = 44/132 (33%), Positives = 59/132 (44%), Gaps = 41/132 (31%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPR 64
E EE P+PMPS+PED ES++AM +F + EE+A L +K+ +C+
Sbjct: 435 EGEEAPRPMPSVPEDPESREAMSSFMDHL-----EEKADLSELVKKKE-----LCFIHHW 484
Query: 65 RNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEG---GGVHQQAGP 121
R+ Q + H + EP G A+ GG H QAG
Sbjct: 485 RDRCHQ---------------------------KTHHLLSEPGGRAKDAALGGGHHQAG- 516
Query: 122 GQGRGEGEAAGA 133
QG EGEAAGA
Sbjct: 517 AQGGDEGEAAGA 528
>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
[Homo sapiens]
Length = 580
Score = 49.7 bits (117), Expect = 9e-07
Identities = 45/135 (33%), Positives = 57/135 (42%), Gaps = 47/135 (34%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKE---CTASAWLICWP 61
E EE P+PMPS+PED ES++AM +F + EE+A L +K+ C W
Sbjct: 383 EGEEAPRPMPSVPEDPESREAMSSFMDHL-----EEKADLSELVKKKELCFIHHW----- 432
Query: 62 RPRRNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEG---GGVHQQ 118
R Q + H + EP G A+ GG H Q
Sbjct: 433 --RERCHQ----------------------------KTHHLLSEPGGRAKDAALGGGHHQ 462
Query: 119 AGPGQGRGEGEAAGA 133
AG QG EGEAAGA
Sbjct: 463 AG-AQGGDEGEAAGA 476
>gi|239745111 PREDICTED: Golgin subfamily A member 8-like protein 3
isoform 1 [Homo sapiens]
Length = 632
Score = 49.7 bits (117), Expect = 9e-07
Identities = 45/135 (33%), Positives = 57/135 (42%), Gaps = 47/135 (34%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKE---CTASAWLICWP 61
E EE P+PMPS+PED ES++AM +F + EE+A L +K+ C W
Sbjct: 435 EGEEAPRPMPSVPEDPESREAMSSFMDHL-----EEKADLSELVKKKELCFIHHW----- 484
Query: 62 RPRRNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEG---GGVHQQ 118
R Q + H + EP G A+ GG H Q
Sbjct: 485 --RERCHQ----------------------------KTHHLLSEPGGRAKDAALGGGHHQ 514
Query: 119 AGPGQGRGEGEAAGA 133
AG QG EGEAAGA
Sbjct: 515 AG-AQGGDEGEAAGA 528
>gi|239745081 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 629
Score = 49.3 bits (116), Expect = 1e-06
Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 41/132 (31%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFNSAVASAEEEQARLCGQLKECTASAWLICWPRPR 64
E EE P+P+PSIP+DLES++AM +F + EE+A L +K +
Sbjct: 432 EGEEAPRPIPSIPQDLESREAMSSFMDHL-----EEKADLSELVK--------------K 472
Query: 65 RNLRQQPQPQELGVIPCVGRPTRPCRGPWRSCGRVHRTVPEPEGSAEG---GGVHQQAGP 121
+ LR QE R ++H + EP G A+ GG H QAG
Sbjct: 473 QELRFIQYWQE------------------RCHQKIHHLLSEPGGRAKDAALGGGHHQAG- 513
Query: 122 GQGRGEGEAAGA 133
QG E EAAGA
Sbjct: 514 AQGGDEDEAAGA 525
>gi|195947367 golgi autoantigen, golgin subfamily a, 8B [Homo
sapiens]
Length = 603
Score = 47.4 bits (111), Expect = 4e-06
Identities = 27/48 (56%), Positives = 30/48 (62%), Gaps = 7/48 (14%)
Query: 98 RVHRTVPEPEGSAEG---GGVHQQAGPGQGRGEGEAAGAG----VACG 138
+VHR + EP SA+ GG H QAGPGQG EGEAAGA ACG
Sbjct: 452 KVHRLLTEPGDSAKDASPGGGHHQAGPGQGGEEGEAAGAAGDGVAACG 499
>gi|31083099 golgi autoantigen, golgin subfamily a, 8A [Homo
sapiens]
Length = 603
Score = 47.4 bits (111), Expect = 4e-06
Identities = 27/48 (56%), Positives = 30/48 (62%), Gaps = 7/48 (14%)
Query: 98 RVHRTVPEPEGSAEG---GGVHQQAGPGQGRGEGEAAGAG----VACG 138
+VHR + EP SA+ GG H QAGPGQG EGEAAGA ACG
Sbjct: 452 KVHRLLTEPGDSAKDASPGGGHHQAGPGQGGEEGEAAGAAGDGVAACG 499
>gi|60218906 golgi autoantigen, golgin subfamily a, 8F [Homo
sapiens]
Length = 283
Score = 46.2 bits (108), Expect = 9e-06
Identities = 26/47 (55%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 98 RVHRTVPEPEGSAEG---GGVHQQAGPGQGRGEGEAAGA---GVACG 138
+V+ + +P GSA+ GG H QAGPGQG EGEAAGA GVA G
Sbjct: 139 KVYHPITKPGGSAKDAAPGGGHHQAGPGQGGDEGEAAGAAGDGVAAG 185
>gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens]
Length = 421
Score = 45.4 bits (106), Expect = 2e-05
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 33/86 (38%)
Query: 3 SEEEEEVPQPMPSIPEDLESQKAM---------------------------------VAF 29
+E EEE PQPMP+IP DLES++ + VAF
Sbjct: 134 TEMEEEAPQPMPNIPGDLESRETVTPLCSWFPRLLISVDFHSFREPVIRHHFTCDQQVAF 193
Query: 30 FNSAVASAEEEQARLCGQLKECTASA 55
FNSA SA+EEQ C L AS+
Sbjct: 194 FNSAGTSAQEEQRMCCQPLAHPVASS 219
>gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens]
Length = 421
Score = 45.4 bits (106), Expect = 2e-05
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 33/86 (38%)
Query: 3 SEEEEEVPQPMPSIPEDLESQKAM---------------------------------VAF 29
+E EEE PQPMP+IP DLES++ + VAF
Sbjct: 134 TEMEEEAPQPMPNIPGDLESRETVTPLCSWFPRFLISVDFHSFREPVIRHHFTCDQQVAF 193
Query: 30 FNSAVASAEEEQARLCGQLKECTASA 55
FNSA SA+EEQ C L AS+
Sbjct: 194 FNSAGTSAQEEQRMCCQPLAHPVASS 219
>gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Homo
sapiens]
Length = 314
Score = 44.3 bits (103), Expect = 4e-05
Identities = 25/48 (52%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 98 RVHRTVPEPEGSAEG---GGVHQQAGPGQGRGEGEAAGAG----VACG 138
+VHR + EP SA+ GG H QAGPG+G EGEA GA ACG
Sbjct: 164 KVHRLLTEPGDSAKDASPGGGHHQAGPGRGGEEGEAVGAAGDGVAACG 211
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 38.5 bits (88), Expect = 0.002
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 5 EEEEVPQPMPSIPEDLESQKAMVAFFN 31
EEEE P+P P+IPEDLES++A +F +
Sbjct: 510 EEEEAPRPTPNIPEDLESREATSSFMD 536
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,722,108
Number of Sequences: 37866
Number of extensions: 460183
Number of successful extensions: 2618
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 2347
Number of HSP's gapped (non-prelim): 312
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.