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Search of human proteins with 6005995
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6005995 clathrin, light polypeptide isoform b [Homo sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6005995 clathrin, light polypeptide isoform b [Homo sapiens] 459 e-130
gi|4502901 clathrin, light polypeptide isoform a [Homo sapiens] 412 e-115
gi|115527060 clathrin, light polypeptide A isoform c [Homo sapiens] 279 1e-75
gi|6005993 clathrin, light polypeptide A isoform b [Homo sapiens] 270 6e-73
gi|4502899 clathrin, light polypeptide A isoform a [Homo sapiens] 239 1e-63
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 40 0.001
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo... 40 0.002
gi|51317384 GLE1 RNA export mediator homolog isoform 1 [Homo sap... 40 0.002
gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo ... 40 0.002
gi|4557627 GLE1 RNA export mediator homolog isoform 2 [Homo sapi... 40 0.002
gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens] 39 0.005
gi|4505257 moesin [Homo sapiens] 39 0.005
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 38 0.006
gi|148886716 downstream of Stk11 [Homo sapiens] 38 0.008
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H... 37 0.014
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 37 0.018
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 36 0.024
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 36 0.024
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 36 0.024
gi|4506467 radixin [Homo sapiens] 36 0.024
gi|188219563 hypothetical protein LOC126731 [Homo sapiens] 36 0.024
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 36 0.024
gi|24307965 UBX domain containing 2 [Homo sapiens] 36 0.031
gi|88759339 aster-associated protein [Homo sapiens] 36 0.031
gi|161702986 ezrin [Homo sapiens] 35 0.041
gi|21614499 ezrin [Homo sapiens] 35 0.041
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 35 0.041
gi|158534059 formin binding protein 4 [Homo sapiens] 35 0.041
gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens] 35 0.041
gi|154354979 myosin X [Homo sapiens] 35 0.053
>gi|6005995 clathrin, light polypeptide isoform b [Homo sapiens]
Length = 229
Score = 459 bits (1181), Expect = e-130
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPT 60
MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPT
Sbjct: 1 MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPT 60
Query: 61 SGAGSEDMGTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 120
SGAGSEDMGTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA
Sbjct: 61 SGAGSEDMGTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 120
Query: 121 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFV 180
SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFV
Sbjct: 121 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFV 180
Query: 181 KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 229
KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 181 KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 229
>gi|4502901 clathrin, light polypeptide isoform a [Homo sapiens]
Length = 211
Score = 412 bits (1058), Expect = e-115
Identities = 211/229 (92%), Positives = 211/229 (92%), Gaps = 18/229 (7%)
Query: 1 MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPT 60
MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPT
Sbjct: 1 MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPT 60
Query: 61 SGAGSEDMGTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 120
SGAGSEDMGTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA
Sbjct: 61 SGAGSEDMGTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAA 120
Query: 121 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFV 180
SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNR ASEEAFV
Sbjct: 121 SKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNR------------------ASEEAFV 162
Query: 181 KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 229
KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR
Sbjct: 163 KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 211
>gi|115527060 clathrin, light polypeptide A isoform c [Homo sapiens]
Length = 236
Score = 279 bits (714), Expect = 1e-75
Identities = 139/215 (64%), Positives = 165/215 (76%), Gaps = 1/215 (0%)
Query: 13 SGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTV 72
+G A EEDPAAAFLAQQESEIAGIENDE F G P G G G + + +
Sbjct: 21 NGVAGAGEEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPG-GPDAVDGVM 79
Query: 73 NGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKA 132
NG+ +QE+NGP D YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA
Sbjct: 80 NGEYYQESNGPTDSYAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKA 139
Query: 133 KKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEW 192
K+LEEW RQ EQ++K K NNR+AD+AFY+QP AD+IGYVA+EEAFV + E +PGTEW
Sbjct: 140 IKELEEWYARQDEQLQKTKANNRVADEAFYKQPFADVIGYVAAEEAFVNDIDESSPGTEW 199
Query: 193 EKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPL 227
E+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 200 ERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 234
>gi|6005993 clathrin, light polypeptide A isoform b [Homo sapiens]
Length = 248
Score = 270 bits (691), Expect = 6e-73
Identities = 139/227 (61%), Positives = 165/227 (72%), Gaps = 13/227 (5%)
Query: 13 SGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTV 72
+G A EEDPAAAFLAQQESEIAGIENDE F G P G G G + + +
Sbjct: 21 NGVAGAGEEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPG-GPDAVDGVM 79
Query: 73 NGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKA 132
NG+ +QE+NGP D YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA
Sbjct: 80 NGEYYQESNGPTDSYAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKA 139
Query: 133 KKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYV------------ASEEAFV 180
K+LEEW RQ EQ++K K NNR+AD+AFY+QP AD+IGYV A+EEAFV
Sbjct: 140 IKELEEWYARQDEQLQKTKANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFV 199
Query: 181 KESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPL 227
+ E +PGTEWE+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 200 NDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 246
>gi|4502899 clathrin, light polypeptide A isoform a [Homo sapiens]
Length = 218
Score = 239 bits (610), Expect = 1e-63
Identities = 126/215 (58%), Positives = 148/215 (68%), Gaps = 19/215 (8%)
Query: 13 SGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTV 72
+G A EEDPAAAFLAQQESEIAGIENDE F G P G G G + + +
Sbjct: 21 NGVAGAGEEDPAAAFLAQQESEIAGIENDEAFAILDGGAPGPQPHGEPPG-GPDAVDGVM 79
Query: 73 NGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKA 132
NG+ +QE+NGP D YAAI+Q DRL EPESIRKWREEQ +RL+ LDA S+ E EW+EKA
Sbjct: 80 NGEYYQESNGPTDSYAAISQVDRLQSEPESIRKWREEQMERLEALDANSRKQEAEWKEKA 139
Query: 133 KKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEW 192
K+LEEW RQ EQ++K K NNR A+EEAFV + E +PGTEW
Sbjct: 140 IKELEEWYARQDEQLQKTKANNR------------------AAEEAFVNDIDESSPGTEW 181
Query: 193 EKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPL 227
E+VA+LCDFNPKSSKQ KDVSR+RSVL+SLKQ PL
Sbjct: 182 ERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 216
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 40.4 bits (93), Expect = 0.001
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 19/219 (8%)
Query: 9 SSSESGAPEAAEEDPAAAFLA---QQESEIAGIENDEGFGAPAGSHAAPAQPG-PTSGAG 64
+ ES AP + PA + Q+E A D + A P P P +G
Sbjct: 535 NEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTT 594
Query: 65 SEDMGTTVNGDVFQEANGPADG--YAAIAQADR--------LTQEPESIRKWREEQRKRL 114
+ T + + ++A + QA+R L +E E+ R RE + +R
Sbjct: 595 DREEATRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLAREAEA-RAEREAEARRR 653
Query: 115 QELDAASKV-TEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYV 173
+E +A K EQE +E+ +K EE R E+ E+ ++ +K F QQ
Sbjct: 654 EEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLER---EKHFQQQEQERQERRK 710
Query: 174 ASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDV 212
EE + K E T+ ++ ++ + N S + K V
Sbjct: 711 RLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEPVKAV 749
Score = 29.3 bits (64), Expect = 2.9
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 129 REKAKKDLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETP 188
++K KKD E N+++ + + + + ++ P A + ASE + +++ +P
Sbjct: 413 QKKEKKDKERENEKEKSALARERSLKK--RQSLPASPRARLSASTASELSPKSKARPSSP 470
Query: 189 GTEWEKVAQLC 199
T W + A C
Sbjct: 471 STSWHRPASPC 481
Score = 28.5 bits (62), Expect = 5.0
Identities = 32/125 (25%), Positives = 49/125 (39%), Gaps = 7/125 (5%)
Query: 83 PADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAK----KDLEE 138
PA Q + E + K R E+R + AA K E EKAK K L+E
Sbjct: 121 PASDSPPTKQEVKKAGERHKLAKERREERAKYL---AAKKAVWLEKEEKAKALREKQLQE 177
Query: 139 WNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQL 198
+R EQ K + ++ Q+ + + Y A+ + VK++ E W L
Sbjct: 178 RRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGAL 237
Query: 199 CDFNP 203
+P
Sbjct: 238 HHSSP 242
>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
[Homo sapiens]
Length = 666
Score = 40.0 bits (92), Expect = 0.002
Identities = 50/221 (22%), Positives = 81/221 (36%), Gaps = 10/221 (4%)
Query: 1 MADDFGFFSSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPT 60
MAD F S E + D + + QE+ +G N G + QP
Sbjct: 1 MADMEDLFGSDADSEAERKDSDSGSDSDSDQENAASG-SNASGSESDQDERGDSGQPSNK 59
Query: 61 S--GAGSEDMGTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQE-- 116
G SED G + + + + A ++D +P + + + E
Sbjct: 60 ELFGDDSEDEGASHHSGSDNHSERSDNRSEASERSDHEDNDPSDVDQHSGSEAPNDDEDE 119
Query: 117 ---LDAASKVTEQEWREKAKKDLEEWNQR-QSEQVEKNKINNRIADKAFYQQPDADIIGY 172
D S +E E EKA D E+W + +S+Q + KI N D+ Q D D +
Sbjct: 120 GHRSDGGSHHSEAEGSEKAHSDDEKWGREDKSDQSDDEKIQNS-DDEERAQGSDEDKLQN 178
Query: 173 VASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVS 213
+E EE P ++ QL + +S + V+
Sbjct: 179 SDDDEKMQNTDDEERPQLSDDERQQLSEEEKANSDDERPVA 219
>gi|51317384 GLE1 RNA export mediator homolog isoform 1 [Homo
sapiens]
Length = 698
Score = 39.7 bits (91), Expect = 0.002
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 48 AGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQEANG-PADGYAAIAQADRLTQEPESIRKW 106
A S +PA P +G +D V Q + G +G + + + E +R W
Sbjct: 91 ASSAFSPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRMYELVHRMKGTEGLRLW 150
Query: 107 REEQRKRLQEL-DAASKVTEQ--EWRE----KAKKDLEEWNQRQSEQV----EKNKINNR 155
+EEQ +++Q L + AS+ ++ EW+E K +DL E ++ S + EK K +R
Sbjct: 151 QEEQERKVQALSEMASEQLKRFDEWKELKQHKEFQDLREVMEKSSREALGHQEKLKAEHR 210
>gi|4827046 U2 small nuclear RNA auxiliary factor 1-like 2 [Homo
sapiens]
Length = 482
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 94 DRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKIN 153
++ QE I+K +EE K+ QE + K+ EQ W E+ +K+ EE Q++ E+ EK +
Sbjct: 79 EQKAQEEFRIKKEKEEAAKKRQE-EQERKLKEQ-WEEQQRKEREEEEQKRQEKKEKEEAL 136
Query: 154 NRIADKA 160
++ D+A
Sbjct: 137 QKMLDQA 143
Score = 30.8 bits (68), Expect = 1.0
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 98 QEPESIRKWREEQRKRLQEL---DAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINN 154
++ E+ +K +EEQ ++L+E + E+E + + KK+ EE Q+ +Q E N
Sbjct: 91 EKEEAAKKRQEEQERKLKEQWEEQQRKEREEEEQKRQEKKEKEEALQKMLDQAE-----N 145
Query: 155 RIADKAFYQQPDADI 169
+ + +Q P+ +
Sbjct: 146 ELENGTTWQNPEPPV 160
>gi|4557627 GLE1 RNA export mediator homolog isoform 2 [Homo
sapiens]
Length = 659
Score = 39.7 bits (91), Expect = 0.002
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 48 AGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQEANG-PADGYAAIAQADRLTQEPESIRKW 106
A S +PA P +G +D V Q + G +G + + + E +R W
Sbjct: 91 ASSAFSPASPATPNGTKGKDESQHTESMVLQSSRGIKVEGCVRMYELVHRMKGTEGLRLW 150
Query: 107 REEQRKRLQEL-DAASKVTEQ--EWRE----KAKKDLEEWNQRQSEQV----EKNKINNR 155
+EEQ +++Q L + AS+ ++ EW+E K +DL E ++ S + EK K +R
Sbjct: 151 QEEQERKVQALSEMASEQLKRFDEWKELKQHKEFQDLREVMEKSSREALGHQEKLKAEHR 210
>gi|55769533 PRKC, apoptosis, WT1, regulator [Homo sapiens]
Length = 340
Score = 38.5 bits (88), Expect = 0.005
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 30/195 (15%)
Query: 14 GAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGP---TSGAGSEDMGT 70
G+ +AA + PA A + A N+ P G+ AAPA PGP GS +
Sbjct: 45 GSSDAAGKPPAGAL----GTPAAAAANELNNNLPGGAPAAPAVPGPGGVNCAVGSAMLTR 100
Query: 71 TVNGDVFQEANGPADGYAAIAQADRLTQEPESI--------------------RKWREEQ 110
G E PA +A R +EP+ + RK RE++
Sbjct: 101 AAPGPRRSEDEPPAASASAAPPPQRDEEEPDGVPEKGKSSGPSARKGKGQIEKRKLREKR 160
Query: 111 RKR-LQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIADKAFY--QQPDA 167
R + + AA + E E E +K+ + + + +N+ N + + Y Q+P
Sbjct: 161 RSTGVVNIPAAECLDEYEDDEAGQKERKREDAITQQNTIQNEAVNLLDPGSSYLLQEPPR 220
Query: 168 DIIGYVASEEAFVKE 182
+ G S + +E
Sbjct: 221 TVSGRYKSTTSVSEE 235
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 38.5 bits (88), Expect = 0.005
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 29/147 (19%)
Query: 98 QEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQR-----QSEQVEKNKI 152
+E E I + +EE +RL++++ +K +QE E+ ++ LE +R ++E++ K +
Sbjct: 335 KEKEKIEREKEELMERLKQIEEQTKKAQQELEEQTRRALELEQERKRAQSEAEKLAKERQ 394
Query: 153 NNRIADKAFYQQPD-------------ADIIGYVASEEAFVKESKEETPGTEWEKVAQLC 199
A +A Q A++ ++ E + K+E+ EW++ AQ+
Sbjct: 395 EAEEAKEALLQASRDQKKTQEQLALEMAELTARISQLE--MARQKKESEAVEWQQKAQMV 452
Query: 200 DFNPKSSKQCKDVSRLRSVLMSLKQTP 226
+D+ + R+ L + TP
Sbjct: 453 Q---------EDLEKTRAELKTAMSTP 470
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 38.1 bits (87), Expect = 0.006
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 92 QADRLTQEPESIRK-----WREEQRKRLQELDAASKVTEQEWREKAK-KDLEEWNQRQSE 145
Q D++ ++ E IR+ WR+E++ R QE + + E+ W+++ K ++ EE Q Q E
Sbjct: 568 QEDKMWRQEEKIREQEEKVWRQEEKIREQE-EKRQEQEEKMWKQEEKIREQEEKIQEQEE 626
Query: 146 QVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKS 205
++ + + +I ++ Q + +G + +E +E T W + ++ + K
Sbjct: 627 KIREQE--EKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEETMWRQEEKIREQEKKI 684
Query: 206 SKQ 208
+Q
Sbjct: 685 REQ 687
Score = 36.6 bits (83), Expect = 0.018
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 18/115 (15%)
Query: 98 QEPESIRKWREEQRKRLQELDAASKVTEQEWREKAK-KDLEEWNQRQSEQVEKNKINNRI 156
QE E + WR+E++ R QE E+ WR++ K ++ EE Q Q E++ K + R
Sbjct: 566 QEQED-KMWRQEEKIREQE--------EKVWRQEEKIREQEEKRQEQEEKMWKQEEKIRE 616
Query: 157 ADKAFYQQPDADIIGYVASEEAFVKESKEETPGTE---WEKVAQLCDFNPKSSKQ 208
++ +Q + + +E ++E +E T E E+ ++C+ K +Q
Sbjct: 617 QEEKIQEQEEK-----IREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQ 666
Score = 34.3 bits (77), Expect = 0.091
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 13/70 (18%)
Query: 92 QADRLTQEPESIRK-----WREEQRKRLQELDAASKVTEQE---WREKAK-KDLEEWNQR 142
Q +++ ++ E IRK WR+E++ R QE K+ EQE WR++ K ++ EE +
Sbjct: 494 QKEKMHEQEEKIRKQEEKVWRQEEKIREQE----EKIREQEEKMWRQEEKIREQEEMWRE 549
Query: 143 QSEQVEKNKI 152
+ + E+ KI
Sbjct: 550 EEKMHEQEKI 559
Score = 33.1 bits (74), Expect = 0.20
Identities = 28/120 (23%), Positives = 60/120 (50%), Gaps = 25/120 (20%)
Query: 92 QADRLTQEPESIRK----WREEQRKRLQELDAASKVTEQE---------WREKAK-KDLE 137
Q +++ ++ E IR+ WREE++ QE K+ E+E WR++ K ++ E
Sbjct: 529 QEEKMWRQEEKIREQEEMWREEEKMHEQE-----KIWEEEKRQEQEDKMWRQEEKIREQE 583
Query: 138 EWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQ 197
E RQ E++ + + + ++ ++Q + + +E ++E +E+ E EK+ +
Sbjct: 584 EKVWRQEEKIREQEEKRQEQEEKMWKQEEK-----IREQEEKIQEQEEKIREQE-EKIRE 637
Score = 31.2 bits (69), Expect = 0.77
Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 17/122 (13%)
Query: 92 QADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNK 151
Q +++ ++ E I++W E ++QE + K+ EQE EK ++ EE +RQ E + + +
Sbjct: 298 QEEKMWRQEEKIQEWEE----KIQEQE--EKIREQE--EKIREQ-EEKMRRQEEMMWEKE 348
Query: 152 INNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTE---WEKVAQLCDFNPKSSKQ 208
R ++ +++ + + +E + E +E+ E WEK ++ + K +Q
Sbjct: 349 EKMRRQEEMMWEKEEK-----MRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQ 403
Query: 209 CK 210
K
Sbjct: 404 EK 405
Score = 30.8 bits (68), Expect = 1.0
Identities = 26/130 (20%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 92 QADRLTQEPESIRK-----WREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQ 146
Q +++ ++ E +R+ W +E++ R QE K + +E+ + EE +RQ E
Sbjct: 326 QEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEM 385
Query: 147 VEKNKINNRIADKAFYQQPDADIIGYVASEEAFVK--ESKEETPGTEWEKVAQLCDFNPK 204
+ + + R ++ ++Q EE ++ E ++E W + ++ + K
Sbjct: 386 MWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEK 445
Query: 205 SSKQCKDVSR 214
+Q K + R
Sbjct: 446 IREQEKKMWR 455
Score = 30.8 bits (68), Expect = 1.0
Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 31/125 (24%)
Query: 90 IAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEK 149
I + + +TQE E K E++ K ++ + + E WR++ K + E ++ EQ EK
Sbjct: 635 IREQEEMTQEQE--EKMGEQEEKMCEQEEKMQEQEETMWRQEEK--IREQEKKIREQEEK 690
Query: 150 NKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQC 209
+ +E ++E +E+ WE+ ++C+ K +Q
Sbjct: 691 -----------------------IREQEEMMQEQEEKM----WEQEEKMCEQEEKMQEQE 723
Query: 210 KDVSR 214
+ + R
Sbjct: 724 EKMRR 728
Score = 28.5 bits (62), Expect = 5.0
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 90 IAQADRLTQEPESIRK-----------WREEQRKRLQELDAASKVTEQE---WREKAKKD 135
I + + QE E IR+ WR+E++ R QE K+ EQE WR++ K
Sbjct: 406 IREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQE----EKIREQEKKMWRQEEKIH 461
Query: 136 LEEWNQRQSEQVEKNKI 152
+E + + ++ E+ ++
Sbjct: 462 EQEKIREEEKRQEQEEM 478
Score = 27.7 bits (60), Expect = 8.5
Identities = 19/106 (17%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 92 QADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQ---------- 141
Q +++ ++ E IR+ ++ ++ +++ K+ E+E K ++ E W Q
Sbjct: 435 QEEKIREQEEKIREQEKKMWRQEEKIHEQEKIREEE---KRQEQEEMWRQEEKIHEQEEI 491
Query: 142 -RQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEE 186
RQ E++ + + R ++ ++Q + + +E ++E +E+
Sbjct: 492 WRQKEKMHEQEEKIRKQEEKVWRQEEK-----IREQEEKIREQEEK 532
>gi|148886716 downstream of Stk11 [Homo sapiens]
Length = 447
Score = 37.7 bits (86), Expect = 0.008
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 10 SSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMG 69
+S +GA + AE P+A+ + + + + G P G+ A P + GP SGA G
Sbjct: 226 NSAAGATDFAEISPSASSDSGEGTSLDAGTRSTKAGGP-GAAAGPGEAGPGSGA-----G 279
Query: 70 TTVNGDVFQEANGPADGYAAIAQADRLTQEPE----SIRKWREEQRKRLQELDAASKVTE 125
T + + DG + + + EP S+ +R Q AAS+ TE
Sbjct: 280 TVLQFLTRLRRHASLDGASPYFKVKKWKLEPSQRAASLDTRGSPKRHHFQRQRAASESTE 339
Query: 126 QEWREKAKKDLEEWNQRQSEQV 147
QE + ++D ++ R + V
Sbjct: 340 QEEGDAPQEDFIQYIARAGDAV 361
>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
sapiens]
Length = 1094
Score = 37.0 bits (84), Expect = 0.014
Identities = 41/207 (19%), Positives = 78/207 (37%), Gaps = 25/207 (12%)
Query: 15 APEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNG 74
A +A +E+ A F ++ E E ++ + +GS + G +ED +
Sbjct: 663 AGKAKQENSAKKFYSESEEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSS 722
Query: 75 DVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKK 134
+ Q+ ES R+ E ++ + SK + E +K
Sbjct: 723 E----------------------QDSESGRESGLENKRTAKR---NSKAKGKSDSEDGEK 757
Query: 135 DLEEWNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEK 194
+ E+ S E + I + +D +P+++ ++E K ++ TP T+
Sbjct: 758 ENEKSKTSDSSNDESSSIEDSSSDSESESEPESESESRRVTKEKEKKTKQDRTPLTKDVS 817
Query: 195 VAQLCDFNPKSSKQCKDVSRLRSVLMS 221
+ L DFNP S+ L LM+
Sbjct: 818 LLDLDDFNPVSTPVALPTPALSPSLMA 844
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 36.6 bits (83), Expect = 0.018
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 94 DRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKIN 153
+ + + E + KWREEQRK+ E K +E ++ K LE+ + + + E K
Sbjct: 158 EEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEG 217
Query: 154 NRI 156
N +
Sbjct: 218 NEM 220
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 36.2 bits (82), Expect = 0.024
Identities = 19/68 (27%), Positives = 32/68 (47%)
Query: 92 QADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNK 151
Q +R ++ RE +R+R +E + Q W E+ ++ E +R+ E+ EK K
Sbjct: 125 QTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKEKKK 184
Query: 152 INNRIADK 159
R DK
Sbjct: 185 EEKRREDK 192
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 36.2 bits (82), Expect = 0.024
Identities = 30/142 (21%), Positives = 70/142 (49%), Gaps = 18/142 (12%)
Query: 92 QADRLTQEPESIRK-----WREEQRKRLQELDAASKVTEQE---WREKAK-KDLEEWNQR 142
Q +++ ++ IR+ WR+E++ QE K+ EQE WR++ K ++ EE +
Sbjct: 309 QEEKMCEQELKIREQEEKMWRQEEKMHEQE----EKIREQEDKMWRQEEKIREQEEKIRE 364
Query: 143 QSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFN 202
Q E++ + + R D+ +Q + + +E ++E +E+ W + ++ + +
Sbjct: 365 QEEKMWRQEEKIREQDEKIQEQEEE-----MWRQEEKIREQEEKRQEKMWRQEKKMREQD 419
Query: 203 PKSSKQCKDVSRLRSVLMSLKQ 224
K +Q +++ R + L++
Sbjct: 420 EKIREQEEEMWRQEEKIRELEE 441
Score = 35.8 bits (81), Expect = 0.031
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 13/97 (13%)
Query: 95 RLTQEPESIRKWREEQRKRLQELDAASKVTEQE---WREKAK-KDLEEWNQRQSEQVEKN 150
R +E + WR+E++ R Q+ K+ EQE WR++ K ++LEE Q Q E++ +
Sbjct: 398 REQEEKRQEKMWRQEKKMREQD----EKIREQEEEMWRQEEKIRELEEMMQDQEEKLREV 453
Query: 151 KINNRIADKAFYQQPDADIIGYVASEEAFVKESKEET 187
+ + ++ +Q + + +E ++E +E+T
Sbjct: 454 EEKMQEEEEKMQEQEEK-----IQRQEEKIQEQEEKT 485
Score = 32.0 bits (71), Expect = 0.45
Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 92 QADRLTQEPESIRK-----WREEQRKRLQELDAASKVTEQE---WREKAK-KDLEE---- 138
Q +++ ++ E IR+ WR+E++ R Q+ K+ EQE WR++ K ++ EE
Sbjct: 351 QEEKIREQEEKIREQEEKMWRQEEKIREQD----EKIQEQEEEMWRQEEKIREQEEKRQE 406
Query: 139 --WNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEE 186
W Q + + + KI + + ++ ++ + +E ++E +E+
Sbjct: 407 KMWRQEKKMREQDEKIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEK 456
Score = 30.0 bits (66), Expect = 1.7
Identities = 26/119 (21%), Positives = 60/119 (50%), Gaps = 17/119 (14%)
Query: 96 LTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNR 155
L Q+ E + WR+E++ + QE K+ EQE + + +++ + W Q + ++ KI +
Sbjct: 291 LNQQQEE-KMWRQEEKIQEQE----EKMCEQELKIREQEE-KMWRQEEKMHEQEEKIREQ 344
Query: 156 IADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSR 214
DK + Q+ + +E ++E +E+ W + ++ + + K +Q +++ R
Sbjct: 345 -EDKMWRQEEK------IREQEEKIREQEEKM----WRQEEKIREQDEKIQEQEEEMWR 392
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 36.2 bits (82), Expect = 0.024
Identities = 30/142 (21%), Positives = 70/142 (49%), Gaps = 18/142 (12%)
Query: 92 QADRLTQEPESIRK-----WREEQRKRLQELDAASKVTEQE---WREKAK-KDLEEWNQR 142
Q +++ ++ IR+ WR+E++ QE K+ EQE WR++ K ++ EE +
Sbjct: 309 QEEKMCEQELKIREQEEKMWRQEEKMHEQE----EKIREQEDKMWRQEEKIREQEEKIRE 364
Query: 143 QSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFN 202
Q E++ + + R D+ +Q + + +E ++E +E+ W + ++ + +
Sbjct: 365 QEEKMWRQEEKIREQDEKIQEQEEE-----MWRQEEKIREQEEKRQEKMWRQEKKMREQD 419
Query: 203 PKSSKQCKDVSRLRSVLMSLKQ 224
K +Q +++ R + L++
Sbjct: 420 EKIREQEEEMWRQEEKIRELEE 441
Score = 35.8 bits (81), Expect = 0.031
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 13/97 (13%)
Query: 95 RLTQEPESIRKWREEQRKRLQELDAASKVTEQE---WREKAK-KDLEEWNQRQSEQVEKN 150
R +E + WR+E++ R Q+ K+ EQE WR++ K ++LEE Q Q E++ +
Sbjct: 398 REQEEKRQEKMWRQEKKMREQD----EKIREQEEEMWRQEEKIRELEEMMQDQEEKLREV 453
Query: 151 KINNRIADKAFYQQPDADIIGYVASEEAFVKESKEET 187
+ + ++ +Q + + +E ++E +E+T
Sbjct: 454 EEKMQEEEEKMQEQEEK-----IQRQEEKIQEQEEKT 485
Score = 32.0 bits (71), Expect = 0.45
Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 92 QADRLTQEPESIRK-----WREEQRKRLQELDAASKVTEQE---WREKAK-KDLEE---- 138
Q +++ ++ E IR+ WR+E++ R Q+ K+ EQE WR++ K ++ EE
Sbjct: 351 QEEKIREQEEKIREQEEKMWRQEEKIREQD----EKIQEQEEEMWRQEEKIREQEEKRQE 406
Query: 139 --WNQRQSEQVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEE 186
W Q + + + KI + + ++ ++ + +E ++E +E+
Sbjct: 407 KMWRQEKKMREQDEKIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEK 456
Score = 30.0 bits (66), Expect = 1.7
Identities = 26/119 (21%), Positives = 60/119 (50%), Gaps = 17/119 (14%)
Query: 96 LTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNR 155
L Q+ E + WR+E++ + QE K+ EQE + + +++ + W Q + ++ KI +
Sbjct: 291 LNQQQEE-KMWRQEEKIQEQE----EKMCEQELKIREQEE-KMWRQEEKMHEQEEKIREQ 344
Query: 156 IADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSR 214
DK + Q+ + +E ++E +E+ W + ++ + + K +Q +++ R
Sbjct: 345 -EDKMWRQEEK------IREQEEKIREQEEKM----WRQEEKIREQDEKIQEQEEEMWR 392
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 36.2 bits (82), Expect = 0.024
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 98 QEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQR-----QSEQVEKNK- 151
+E E I + +EE +RL++++ + ++E E+ +K LE +R ++E++EK +
Sbjct: 335 KEKERIEREKEELMERLKQIEEQTIKAQKELEEQTRKALELDQERKRAKEEAERLEKERR 394
Query: 152 --------INNRIADKAFYQQPDADIIGYVASEEAFVKES--KEETPGTEWEKVA 196
I + AD+ Q+ A + ++ A ++E+ K+E TEW+ A
Sbjct: 395 AAEEAKSAIAKQAADQMKNQEQLAAELAEFTAKIALLEEAKKKKEEEATEWQHKA 449
>gi|188219563 hypothetical protein LOC126731 [Homo sapiens]
Length = 270
Score = 36.2 bits (82), Expect = 0.024
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 33 SEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQEANGPADGYAAIAQ 92
SE + G G PA A P+ P P A E+ G ++ D A A+
Sbjct: 58 SEDSASSESSGAGGPAPRCAPPSPPPPVEPATQEEAERRARGAPEEQDAEAGDAEAEDAE 117
Query: 93 ADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKA-----KKDLEEWNQRQSEQV 147
L P + + EQ+ R +E D + TE + A + + QR S ++
Sbjct: 118 DAALPALPVKDVEDKPEQQTRTRETDKSPTSTEPRQQPSALFARGNRKAVKSPQRSSSKI 177
Query: 148 EKNK 151
++NK
Sbjct: 178 KENK 181
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 36.2 bits (82), Expect = 0.024
Identities = 29/96 (30%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 100 PESIR-KWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKINNRIAD 158
PE IR + RE++R+R +EL+ K EQE ++ +KD E Q + +++EK + R +
Sbjct: 501 PEEIREREREKEREREKELE---KEQEQEREKEREKDRER-QQEKEKELEKEQEKQREME 556
Query: 159 KAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEK 194
K Q+ + ++ E+ +++ KE+ E EK
Sbjct: 557 KERKQEKEKELERQKEKEKE-LQKMKEQEKECELEK 591
Score = 32.3 bits (72), Expect = 0.35
Identities = 23/106 (21%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 92 QADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSE------ 145
Q +E E R+ ++E+ K L++ + E+E +++ +K+LE +++ E
Sbjct: 523 QEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQKMKE 582
Query: 146 ---QVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETP 188
+ E K ++ +K ++P+ + + V +E+ +KEE P
Sbjct: 583 QEKECELEKEREKLEEKIEPREPNLEPM--VEKQESENSCNKEEEP 626
Score = 28.9 bits (63), Expect = 3.8
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 96 LTQEPESIR-KWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNK 151
L +E E R K RE+ R+R QE + + +++ RE K+ +E + Q EK K
Sbjct: 519 LEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEK 575
>gi|24307965 UBX domain containing 2 [Homo sapiens]
Length = 508
Score = 35.8 bits (81), Expect = 0.031
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 12/152 (7%)
Query: 9 SSSESGAPEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDM 68
S + E++ P+A+F E + N E P S + G E
Sbjct: 120 SVANGSQSESSVSTPSASFEPNNTCENSQSRNAELCEIPPTSDTKS-----DTATGGESA 174
Query: 69 GTTVNGDVFQEANGPADGYAAIAQADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEW 128
G + QE +G +D A R+ + + + + REE+RK ++ + ++
Sbjct: 175 GHATSS---QEPSGCSDQRPAEDLNIRVERLTKKLEERREEKRKEEEQREIKKEIE---- 227
Query: 129 REKAKKDLEEWNQRQSEQVEKNKINNRIADKA 160
R K K++ ++ ++Q E++ K + R +KA
Sbjct: 228 RRKTGKEMLDYKRKQEEELTKRMLEERNREKA 259
>gi|88759339 aster-associated protein [Homo sapiens]
Length = 647
Score = 35.8 bits (81), Expect = 0.031
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 93 ADRLTQEPESIRKWRE-------EQRKRLQELDAASKVTEQEWREKAKKD----LEEWNQ 141
A R + ++ KW+E E+ ++ +E + A K E+E + KKD +E+WN+
Sbjct: 506 AARKGEALQAFEKWKEKKMEYLKEKNRKEREYERAKKQKEEETVAEKKKDNLTAVEKWNE 565
Query: 142 RQS---EQVEKNKINNR 155
++ +Q EK KIN +
Sbjct: 566 KKEAFFKQKEKEKINEK 582
Score = 33.9 bits (76), Expect = 0.12
Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 24/115 (20%)
Query: 104 RKWREEQRKRLQELDAASKVTE----QEWREKAKKDLEEWN--QRQSEQVEKNKINNRIA 157
++ E+ +K+ +E +AA K ++W+EK + L+E N +R+ E+ +K K +A
Sbjct: 491 KRLEEKNKKKTEEENAARKGEALQAFEKWKEKKMEYLKEKNRKEREYERAKKQKEEETVA 550
Query: 158 DK----------------AFYQQPDADIIGYVASEE--AFVKESKEETPGTEWEK 194
+K AF++Q + + I EE K+ K++ E+EK
Sbjct: 551 EKKKDNLTAVEKWNEKKEAFFKQKEKEKINEKRKEELKRAEKKDKDKQAINEYEK 605
>gi|161702986 ezrin [Homo sapiens]
Length = 586
Score = 35.4 bits (80), Expect = 0.041
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 94 DRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKIN 153
+ + +E E + + +EE RLQ+ + +K E+E E+ ++ L+ +R+ Q E ++
Sbjct: 331 ETVEREKEQMMREKEELMLRLQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLE 390
Query: 154 -NRIADKAFYQQPDADIIGYVASEEAFVKESKEET 187
+R+A ++ + + + S+E E E T
Sbjct: 391 ADRMAALRAKEELERQAVDQIKSQEQLAAELAEYT 425
>gi|21614499 ezrin [Homo sapiens]
Length = 586
Score = 35.4 bits (80), Expect = 0.041
Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 94 DRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSEQVEKNKIN 153
+ + +E E + + +EE RLQ+ + +K E+E E+ ++ L+ +R+ Q E ++
Sbjct: 331 ETVEREKEQMMREKEELMLRLQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLE 390
Query: 154 -NRIADKAFYQQPDADIIGYVASEEAFVKESKEET 187
+R+A ++ + + + S+E E E T
Sbjct: 391 ADRMAALRAKEELERQAVDQIKSQEQLAAELAEYT 425
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 35.4 bits (80), Expect = 0.041
Identities = 26/112 (23%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 92 QADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEW---REKAKKDLEEWNQRQSEQVE 148
Q +R+ ++ E +R+ E R++ + + K+ E+E REK ++ EE + Q E+++
Sbjct: 357 QEERMWEQDERLREKEERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQ 416
Query: 149 KNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTEWEKVAQLCD 200
K + N ++ +QQ E+ + +E +E WE+ ++ D
Sbjct: 417 KQEENMWEQEEKEWQQQRLP----EQKEKLWEQEKMQEQEEKIWEQEEKIRD 464
Score = 32.0 bits (71), Expect = 0.45
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 92 QADRLTQEPESIRK-----WREEQRKRLQELDAASKVTEQEWR-EKAKKDLEEWNQRQSE 145
Q + L ++ + IRK WR+E+R R QE K+ EQE + + +K L E + E
Sbjct: 239 QEEELREQEKKIRKQEEKMWRQEERLREQE----GKMREQEEKMRRQEKRLREQEKELRE 294
Query: 146 QVEKNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTE---WEKVAQLCDFN 202
Q ++ + ++ ++ Q + + +E ++E +E+ E WE+ Q+ +
Sbjct: 295 QEKELREQKKLREQEEQMQEQEE---KMWEQEEKMREQEEKMWRQEERLWEQEKQMREQE 351
Query: 203 PKSSKQ 208
K Q
Sbjct: 352 QKMRDQ 357
Score = 27.7 bits (60), Expect = 8.5
Identities = 19/103 (18%), Positives = 51/103 (49%), Gaps = 11/103 (10%)
Query: 92 QADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAK---KDLEEWNQRQSEQVE 148
Q +++ ++ E K RE++ K ++ + + E+ W ++ K ++ E+ Q Q E +
Sbjct: 579 QEEKMQEQEE---KMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMW 635
Query: 149 KNKINNRIADKAFYQQPDADIIGYVASEEAFVKESKEETPGTE 191
+ + + ++ ++Q + + +E ++E +E+ G E
Sbjct: 636 EQEEKMQEQEEKMWEQEEK-----MREQEEKMREQEEKMQGQE 673
>gi|158534059 formin binding protein 4 [Homo sapiens]
Length = 1017
Score = 35.4 bits (80), Expect = 0.041
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 97 TQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQ--SEQVEKN 150
T+ P ++KW+ QR+ +E +++S +E++ A+K +EEW Q+Q S E+N
Sbjct: 941 TKMPSLVKKWQSIQRELDEEDNSSS--SEEDRESTAQKRIEEWKQQQLVSGMAERN 994
>gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 492
Score = 35.4 bits (80), Expect = 0.041
Identities = 31/83 (37%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 6 GFFSSSESG--APEAAEEDPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGA 63
G S++ SG A AA +PAAA A + AG E PAG AAP P P
Sbjct: 299 GLNSAAASGVLAAVAAGANPAAAAAANLLASYAG----EAGAGPAGG-AAPPPPPPPGAL 353
Query: 64 GSEDMGTTVNGDVFQEANGPADG 86
GS + NG + A G A G
Sbjct: 354 GSFALAAAANGYLGAGAGGGAGG 376
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 35.0 bits (79), Expect = 0.053
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 92 QADRLTQEPESIRKWREEQRKRLQELDAASKVTEQEWREKAKKDLEEWNQRQSE-----Q 146
Q ++ QE E +K EE+R+R +E A +QE + +++LE + Q E +
Sbjct: 818 QEEKKKQEEEEKKKREEEERERERERREAELRAQQEEETRKQQELEALQKSQKEAELTRE 877
Query: 147 VEKNKINNRIAD 158
+EK K N ++ +
Sbjct: 878 LEKQKENKQVEE 889
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.124 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,647,508
Number of Sequences: 37866
Number of extensions: 485280
Number of successful extensions: 4812
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 275
Number of HSP's that attempted gapping in prelim test: 3711
Number of HSP's gapped (non-prelim): 1237
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.