Guide to the Human Genome
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Search of human proteins with 6005882

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6005882 protease, serine, 23 precursor [Homo sapiens]
         (383 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6005882 protease, serine, 23 precursor [Homo sapiens]              805   0.0  
gi|23503297 protease, serine, 35 [Homo sapiens]                       395   e-110
gi|15559207 elastase 2A preproprotein [Homo sapiens]                   40   0.003
gi|33667063 transmembrane protease, serine 9 [Homo sapiens]            40   0.003
gi|58331209 chymotrypsin-like elastase family, member 1 [Homo sa...    40   0.004
gi|4503625 coagulation factor X preproprotein [Homo sapiens]           40   0.005
gi|117956391 protease, serine, 33 [Homo sapiens]                       40   0.005
gi|62526043 chymotrypsin C preproprotein [Homo sapiens]                36   0.051
gi|42544239 complement factor D preproprotein [Homo sapiens]           35   0.11 
gi|239753545 PREDICTED: similar to hCG2041452 [Homo sapiens]           35   0.15 
gi|239748117 PREDICTED: hypothetical protein XP_002346556 [Homo ...    35   0.15 
gi|239742016 PREDICTED: hypothetical protein XP_002342392 [Homo ...    35   0.15 
gi|148806923 testis serine protease 5 [Homo sapiens]                   34   0.19 
gi|87196600 polyserase 3 [Homo sapiens]                                34   0.19 
gi|32698940 transmembrane protease, serine 12 [Homo sapiens]           34   0.25 
gi|58331211 elastase 2B preproprotein [Homo sapiens]                   33   0.33 
gi|119392081 complement factor I preproprotein [Homo sapiens]          33   0.43 
gi|225543438 complement component 2 isoform 2 preproprotein [Hom...    33   0.43 
gi|14550407 complement component 2 isoform 1 preproprotein [Homo...    33   0.43 
gi|13173471 transmembrane protease, serine 3 isoform 1 [Homo sap...    33   0.43 
gi|14602457 transmembrane protease, serine 3 isoform 3 [Homo sap...    33   0.43 
gi|116256363 transmembrane protease, serine 13 [Homo sapiens]          33   0.43 
gi|21264363 mannan-binding lectin serine protease 2 isoform 1 pr...    33   0.56 
gi|4503649 coagulation factor IX preproprotein [Homo sapiens]          32   0.96 
gi|148231605 ovochymase 2 [Homo sapiens]                               32   0.96 
gi|110815798 ovochymase 1 [Homo sapiens]                               32   0.96 
gi|110578663 hypothetical protein LOC203074 [Homo sapiens]             32   0.96 
gi|4505881 plasminogen [Homo sapiens]                                  32   1.3  
gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens]                32   1.3  
gi|4503549 neutrophil elastase preproprotein [Homo sapiens]            32   1.3  

>gi|6005882 protease, serine, 23 precursor [Homo sapiens]
          Length = 383

 Score =  805 bits (2080), Expect = 0.0
 Identities = 383/383 (100%), Positives = 383/383 (100%)

Query: 1   MAGIPGLLFLLFFLLCAVGQVSPYSAPWKPTWPAYRLPVVLPQSTLNLAKPDFGAEAKLE 60
           MAGIPGLLFLLFFLLCAVGQVSPYSAPWKPTWPAYRLPVVLPQSTLNLAKPDFGAEAKLE
Sbjct: 1   MAGIPGLLFLLFFLLCAVGQVSPYSAPWKPTWPAYRLPVVLPQSTLNLAKPDFGAEAKLE 60

Query: 61  VSSSCGPQCHKGTPLPTYEEAKQYLSYETLYANGSRTETQVGIYILSSSGDGAQHRDSGS 120
           VSSSCGPQCHKGTPLPTYEEAKQYLSYETLYANGSRTETQVGIYILSSSGDGAQHRDSGS
Sbjct: 61  VSSSCGPQCHKGTPLPTYEEAKQYLSYETLYANGSRTETQVGIYILSSSGDGAQHRDSGS 120

Query: 121 SGKSRRKRQIYGYDSRFSIFGKDFLLNYPFSTSVKLSTGCTGTLVAEKHVLTAAHCIHDG 180
           SGKSRRKRQIYGYDSRFSIFGKDFLLNYPFSTSVKLSTGCTGTLVAEKHVLTAAHCIHDG
Sbjct: 121 SGKSRRKRQIYGYDSRFSIFGKDFLLNYPFSTSVKLSTGCTGTLVAEKHVLTAAHCIHDG 180

Query: 181 KTYVKGTQKLRVGFLKPKFKDGGRGANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNAND 240
           KTYVKGTQKLRVGFLKPKFKDGGRGANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNAND
Sbjct: 181 KTYVKGTQKLRVGFLKPKFKDGGRGANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNAND 240

Query: 241 IGMDYDYALLELKKPHKRKFMKIGVSPPAKQLPGGRIHFSGYDNDRPGNLVYRFCDVKDE 300
           IGMDYDYALLELKKPHKRKFMKIGVSPPAKQLPGGRIHFSGYDNDRPGNLVYRFCDVKDE
Sbjct: 241 IGMDYDYALLELKKPHKRKFMKIGVSPPAKQLPGGRIHFSGYDNDRPGNLVYRFCDVKDE 300

Query: 301 TYDLLYQQCDAQPGASGSGVYVRMWKRQQQKWERKIIGIFSGHQWVDMNGSPQDFNVAVR 360
           TYDLLYQQCDAQPGASGSGVYVRMWKRQQQKWERKIIGIFSGHQWVDMNGSPQDFNVAVR
Sbjct: 301 TYDLLYQQCDAQPGASGSGVYVRMWKRQQQKWERKIIGIFSGHQWVDMNGSPQDFNVAVR 360

Query: 361 ITPLKYAQICYWIKGNYLDCREG 383
           ITPLKYAQICYWIKGNYLDCREG
Sbjct: 361 ITPLKYAQICYWIKGNYLDCREG 383


>gi|23503297 protease, serine, 35 [Homo sapiens]
          Length = 413

 Score =  395 bits (1014), Expect = e-110
 Identities = 199/414 (48%), Positives = 265/414 (64%), Gaps = 42/414 (10%)

Query: 7   LLFLLFFLLCAVGQVSPYSAPWKPTWPAYRLPVVLPQSTLNLAKPDFGAEAKLEVSSSCG 66
           LL+L+FF       +      W   W   ++P ++ + T +L  P F A+AK+ V++ CG
Sbjct: 5   LLWLIFFTP-GWTLIDGSEMEWDFMWHLRKVPRIVSERTFHLTSPAFEADAKMMVNTVCG 63

Query: 67  PQCHKGTPLPTYEEAKQYLSYETLYANGSRTETQVGIYILSSSGDGAQHRDSGSSGKS-R 125
            +C K  P P+  E + YLSYET++ NG+RT T+V +  L         ++  + G S R
Sbjct: 64  IECQKELPTPSLSELEDYLSYETVFENGTRTLTRVKVQDLVLEPT----QNITTKGVSVR 119

Query: 126 RKRQIYGYDSRFSIFGKDFLLNYPFSTSVKLSTGCTGTLVAEKHVLTAAHCIHDGKTYVK 185
           RKRQ+YG DSRFSI  K FL N+PFST+VKLSTGC+G L++ +HVLTAAHC+HDGK YVK
Sbjct: 120 RKRQVYGTDSRFSILDKRFLTNFPFSTAVKLSTGCSGILISPQHVLTAAHCVHDGKDYVK 179

Query: 186 GTQKLRVGFLKPKFKDGGRGANDSTSAMPE------------------------------ 215
           G++KLRVG LK + K GG+    S  +  E                              
Sbjct: 180 GSKKLRVGLLKMRNKSGGKKRRGSKRSRREASGGDQREGTREHLQERAKGGRRRKKSGRG 239

Query: 216 ------QMKFQWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKPHKRKFMKIGVSPPA 269
                 +  FQW RVK TH+PKGW +G   D  +DYDYALLELK+ HK+K+M++G+SP  
Sbjct: 240 QRIAEGRPSFQWTRVKNTHIPKGWARGGMGDATLDYDYALLELKRAHKKKYMELGISPTI 299

Query: 270 KQLPGGRIHFSGYDNDRPGNLVYRFCDVKDETYDLLYQQCDAQPGASGSGVYVRMWKRQQ 329
           K++PGG IHFSG+DNDR   LVYRFC V DE+ DLLYQ CDA+ G++GSGVY+R+    +
Sbjct: 300 KKMPGGMIHFSGFDNDRADQLVYRFCSVSDESNDLLYQYCDAESGSTGSGVYLRLKDPDK 359

Query: 330 QKWERKIIGIFSGHQWVDMNGSPQDFNVAVRITPLKYAQICYWIKGNYLDCREG 383
           + W+RKII ++SGHQWVD++G  +D+NVAVRITPLKYAQIC WI GN  +C  G
Sbjct: 360 KNWKRKIIAVYSGHQWVDVHGVQKDYNVAVRITPLKYAQICLWIHGNDANCAYG 413


>gi|15559207 elastase 2A preproprotein [Homo sapiens]
          Length = 269

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 29/115 (25%)

Query: 147 NYPFSTSVKLSTG------CTGTLVAEKHVLTAAHCIHDGKTYVKGTQKLRVGFLKPKFK 200
           ++P+  S++ S+       C G+L+A   VLTAAHCI   +TY       RVG  +    
Sbjct: 39  SWPWQVSLQYSSNGKWYHTCGGSLIANSWVLTAAHCISSSRTY-------RVGLGRHNLY 91

Query: 201 DGGRGANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKP 255
               G+               + V +  V K W   N+N I    D ALL+L  P
Sbjct: 92  VAESGS-------------LAVSVSKIVVHKDW---NSNQISKGNDIALLKLANP 130


>gi|33667063 transmembrane protease, serine 9 [Homo sapiens]
          Length = 1059

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 43/137 (31%), Positives = 57/137 (41%), Gaps = 27/137 (19%)

Query: 160 CTGTLVAEKHVLTAAHCIHDGKTYVKGTQKLRVGFLKPKFKDGGRGANDSTSAMPEQMKF 219
           C   LVAE+ +L+AAHC       V G  K    FL   F  G  G              
Sbjct: 853 CGAVLVAERWLLSAAHCFD-----VYGDPKQWAAFLGTPFLSGAEG-------------- 893

Query: 220 QWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKPHKRKFM--KIGVSPPAKQLPGG-R 276
           Q  RV R +    +     N   +DYD ALLEL  P +R  +   I +  PA + P G R
Sbjct: 894 QLERVARIYKHPFY-----NLYTLDYDVALLELAGPVRRSRLVRPICLPEPAPRPPDGTR 948

Query: 277 IHFSGYDNDRPGNLVYR 293
              +G+ + R G  + R
Sbjct: 949 CVITGWGSVREGGSMAR 965


>gi|58331209 chymotrypsin-like elastase family, member 1 [Homo
           sapiens]
          Length = 258

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 30/128 (23%)

Query: 147 NYPFSTSVKLSTG------CTGTLVAEKHVLTAAHCIHDGKTYVKGTQKLRVGFLKPKFK 200
           ++P   S++  +G      C GTL+ +  V+TAAHC+   KT+     ++  G       
Sbjct: 29  SWPSQISLQYRSGGSRYHTCGGTLIRQNWVMTAAHCVDYQKTF-----RVVAG------- 76

Query: 201 DGGRGANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNANDIGMDYDYALLEL-KKPHKRK 259
           D     ND T         Q++ V++  V   W   N++++   YD ALL L +      
Sbjct: 77  DHNLSQNDGTE--------QYVSVQKIVVHPYW---NSDNVAAGYDIALLRLAQSVTLNS 125

Query: 260 FMKIGVSP 267
           ++++GV P
Sbjct: 126 YVQLGVLP 133


>gi|4503625 coagulation factor X preproprotein [Homo sapiens]
          Length = 488

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 25/96 (26%)

Query: 160 CTGTLVAEKHVLTAAHCIHDGKTYVKGTQKLRVGFLKPKFKDGGRGANDSTSAMPEQMKF 219
           C GT+++E ++LTAAHC++  K +     K+RVG    + ++GG   ++    + +  +F
Sbjct: 261 CGGTILSEFYILTAAHCLYQAKRF-----KVRVGDRNTEQEEGGEAVHE-VEVVIKHNRF 314

Query: 220 QWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKP 255
                K T+               D+D A+L LK P
Sbjct: 315 ----TKETY---------------DFDIAVLRLKTP 331


>gi|117956391 protease, serine, 33 [Homo sapiens]
          Length = 280

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 30/189 (15%)

Query: 103 IYILSSSGDGAQHRDSGSSGKSRRKRQIYGYDSRFSIFGKDFLLNYPFSTSVKLSTGCTG 162
           + +L     G Q R S + G+ R   +I G        G+D    +  S   + +  C G
Sbjct: 10  LLLLVLGAAGTQGRKSAACGQPRMSSRIVGGRD-----GRDGEWPWQASIQHRGAHVCGG 64

Query: 163 TLVAEKHVLTAAHCIHDGKTYVKGTQKLRVGFLKPKFKDGGRGANDSTSAMPEQMKFQWI 222
           +L+A + VLTAAHC    +  +    ++R+G L+              S  P  +    +
Sbjct: 65  SLIAPQWVLTAAHCF--PRRALPAEYRVRLGALR------------LGSTSPRTLS---V 107

Query: 223 RVKRTHVPKGWIKGNANDIGMDYDYALLELKKPHKRKFMKIGVS---PPAKQLPGGRIHF 279
            V+R  +P  + +  A       D ALL+L++P         V    P A+  PG     
Sbjct: 108 PVRRVLLPPDYSEDGARG-----DLALLQLRRPVPLSARVQPVCLPVPGARPPPGTPCRV 162

Query: 280 SGYDNDRPG 288
           +G+ + RPG
Sbjct: 163 TGWGSLRPG 171


>gi|62526043 chymotrypsin C preproprotein [Homo sapiens]
          Length = 268

 Score = 36.2 bits (82), Expect = 0.051
 Identities = 15/24 (62%), Positives = 18/24 (75%)

Query: 160 CTGTLVAEKHVLTAAHCIHDGKTY 183
           C GTL+A   VLTAAHCI + +TY
Sbjct: 59  CGGTLIASNFVLTAAHCISNTRTY 82


>gi|42544239 complement factor D preproprotein [Homo sapiens]
          Length = 253

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 2/33 (6%)

Query: 149 PFSTSVKLSTG--CTGTLVAEKHVLTAAHCIHD 179
           P+  SV+L+    C G LVAE+ VL+AAHC+ D
Sbjct: 38  PYMASVQLNGAHLCGGVLVAEQWVLSAAHCLED 70


>gi|239753545 PREDICTED: similar to hCG2041452 [Homo sapiens]
          Length = 410

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 88  ETLYANGS-RTETQVGIYILSSSGDGAQHRDSGSSGKSRRKRQIYGYDSRFSIFGKDFL- 145
           ET  A GS  T    G ++ S+S  G      G S   R+  Q  G+     I G     
Sbjct: 112 ETSVAPGSPATAGPPGSWVTSASTVGEALESDGISDLGRQFSQACGHRVSRMIGGLPAPN 171

Query: 146 LNYPFSTSVKLST--GCTGTLVAEKHVLTAAHCIHDG 180
             +P+  S++ S    C G+L+  + VLTAAHC+  G
Sbjct: 172 KKWPWQVSLQTSNIHHCGGSLIDRRWVLTAAHCVFRG 208


>gi|239748117 PREDICTED: hypothetical protein XP_002346556 [Homo
           sapiens]
          Length = 410

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 88  ETLYANGS-RTETQVGIYILSSSGDGAQHRDSGSSGKSRRKRQIYGYDSRFSIFGKDFL- 145
           ET  A GS  T    G ++ S+S  G      G S   R+  Q  G+     I G     
Sbjct: 112 ETSVAPGSPATAGPPGSWVTSASTVGEALESDGISDLGRQFSQACGHRVSRMIGGLPAPN 171

Query: 146 LNYPFSTSVKLST--GCTGTLVAEKHVLTAAHCIHDG 180
             +P+  S++ S    C G+L+  + VLTAAHC+  G
Sbjct: 172 KKWPWQVSLQTSNIHHCGGSLIDRRWVLTAAHCVFRG 208


>gi|239742016 PREDICTED: hypothetical protein XP_002342392 [Homo
           sapiens]
          Length = 410

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 88  ETLYANGS-RTETQVGIYILSSSGDGAQHRDSGSSGKSRRKRQIYGYDSRFSIFGKDFL- 145
           ET  A GS  T    G ++ S+S  G      G S   R+  Q  G+     I G     
Sbjct: 112 ETSVAPGSPATAGPPGSWVTSASTVGEALESDGISDLGRQFSQACGHRVSRMIGGLPAPN 171

Query: 146 LNYPFSTSVKLST--GCTGTLVAEKHVLTAAHCIHDG 180
             +P+  S++ S    C G+L+  + VLTAAHC+  G
Sbjct: 172 KKWPWQVSLQTSNIHHCGGSLIDRRWVLTAAHCVFRG 208


>gi|148806923 testis serine protease 5 [Homo sapiens]
          Length = 228

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)

Query: 147 NYPFSTSVKLSTG--CTGTLVAEKHVLTAAHCIHDGKTY--VKGTQKLR 191
           ++P+  S+++     C G L+    V+TAAHCI   K Y  V GT KL+
Sbjct: 4   HWPWEVSLRMENEHVCGGALIDPSWVVTAAHCIQGTKEYSVVLGTSKLQ 52


>gi|87196600 polyserase 3 [Homo sapiens]
          Length = 553

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 28/149 (18%)

Query: 148 YPFSTSVKLSTG--CTGTLVAEKHVLTAAHCIHDGKTYVKGTQKLRVGFLKPKFKDGGRG 205
           +P+  SV+      C+G+LVA+  VLTAAHC          +  + +G L+         
Sbjct: 48  WPWQASVRRQGAHICSGSLVADTWVLTAAHCFEKAAATELNSWSVVLGSLQ--------- 98

Query: 206 ANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKPHKRKFMKIGV 265
             +  S   E++    +++ R +          N      D ALL+L   H      + +
Sbjct: 99  -REGLSPGAEEVGVAALQLPRAY----------NHYSQGSDLALLQL--AHPTTHTPLCL 145

Query: 266 SPPAKQLP-GGRIHFSGYD---NDRPGNL 290
             PA + P G     +G+D   +D PG L
Sbjct: 146 PQPAHRFPFGASCWATGWDQDTSDAPGTL 174



 Score = 29.3 bits (64), Expect = 6.2
 Identities = 12/17 (70%), Positives = 14/17 (82%)

Query: 160 CTGTLVAEKHVLTAAHC 176
           C G LV+E+ VLTAAHC
Sbjct: 326 CGGALVSEEAVLTAAHC 342


>gi|32698940 transmembrane protease, serine 12 [Homo sapiens]
          Length = 348

 Score = 33.9 bits (76), Expect = 0.25
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 11/54 (20%)

Query: 148 YPFSTSVKLSTG------CTGTLVAEKHVLTAAHCIHDGK-----TYVKGTQKL 190
           +P+  S+++  G      C GTLV E+ VLTAAHC  D       T V GT  +
Sbjct: 89  WPWVVSLQIKYGRVLVHVCGGTLVRERWVLTAAHCTKDASDPLMWTAVIGTNNI 142


>gi|58331211 elastase 2B preproprotein [Homo sapiens]
          Length = 269

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 29/115 (25%)

Query: 147 NYPFSTSVKLSTG------CTGTLVAEKHVLTAAHCIHDGKTYVKGTQKLRVGFLKPKFK 200
           ++P+  S++ S+       C G+L+A   VLTAAHCI        G  ++ +G       
Sbjct: 39  SWPWQVSLQYSSNGQWYHTCGGSLIANSWVLTAAHCISS-----SGIYRVMLGQHNLYVA 93

Query: 201 DGGRGANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKP 255
           + G  A               + V +  V K W   N++ +    D ALL+L  P
Sbjct: 94  ESGSLA---------------VSVSKIVVHKDW---NSDQVSKGNDIALLKLANP 130


>gi|119392081 complement factor I preproprotein [Homo sapiens]
          Length = 583

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 32/147 (21%)

Query: 125 RRKRQIYGYDSRFSIFGKDFLLNYPFSTSVKLSTG--CTGTLVAEKHVLTAAHCIHDGKT 182
           RRKR + G  ++          + P+  ++K ++G  C G  +    +LTAAHC+   KT
Sbjct: 336 RRKRIVGGKRAQLG--------DLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRASKT 387

Query: 183 YVKGTQKLRVGFLKPKFKDGGRGANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNANDIG 242
           +        V ++ P  K                      R+   +V +     N N   
Sbjct: 388 HRYQIWTTVVDWIHPDLK----------------------RIVIEYVDRIIFHENYNAGT 425

Query: 243 MDYDYALLELKKPHKRKFMKIGVSPPA 269
              D AL+E+KK   +K  ++  S PA
Sbjct: 426 YQNDIALIEMKKDGNKKDCELPRSIPA 452


>gi|225543438 complement component 2 isoform 2 preproprotein [Homo
           sapiens]
          Length = 620

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 160 CTGTLVAEKHVLTAAHCIHDGKTY 183
           C G L++++ VLTAAHC  DG  +
Sbjct: 360 CRGALISDQWVLTAAHCFRDGNDH 383


>gi|14550407 complement component 2 isoform 1 preproprotein [Homo
           sapiens]
          Length = 752

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 160 CTGTLVAEKHVLTAAHCIHDGKTY 183
           C G L++++ VLTAAHC  DG  +
Sbjct: 492 CRGALISDQWVLTAAHCFRDGNDH 515


>gi|13173471 transmembrane protease, serine 3 isoform 1 [Homo
           sapiens]
          Length = 454

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 132 GYDSRFSIFGKDFLLNYPFSTSVKLSTG--CTGTLVAEKHVLTAAHCIHDGKTYVKGTQK 189
           GY SR        L  +P+  S++      C G+++    ++TAAHC++D   Y+  +  
Sbjct: 212 GYSSRIVGGNMSLLSQWPWQASLQFQGYHLCGGSVITPLWIITAAHCVYD--LYLPKSWT 269

Query: 190 LRVGFL 195
           ++VG +
Sbjct: 270 IQVGLV 275


>gi|14602457 transmembrane protease, serine 3 isoform 3 [Homo
           sapiens]
          Length = 344

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 132 GYDSRFSIFGKDFLLNYPFSTSVKLSTG--CTGTLVAEKHVLTAAHCIHDGKTYVKGTQK 189
           GY SR        L  +P+  S++      C G+++    ++TAAHC++D   Y+  +  
Sbjct: 212 GYSSRIVGGNMSLLSQWPWQASLQFQGYHLCGGSVITPLWIITAAHCVYD--LYLPKSWT 269

Query: 190 LRVGFL 195
           ++VG +
Sbjct: 270 IQVGLV 275


>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
          Length = 567

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 25/110 (22%)

Query: 148 YPFSTSVKLSTG--CTGTLVAEKHVLTAAHCIHDGKTYVKGTQKLRVGFLKPKFKDGGRG 205
           +P+  S+   T   C GTL+  + VLTAAHC    +  V    K+  G            
Sbjct: 337 WPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAG------------ 384

Query: 206 ANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKP 255
              +   +PE      I           I  N  D   DYD AL+ L KP
Sbjct: 385 -TSNLHQLPEAASIAEI----------IINSNYTDEEDDYDIALMRLSKP 423


>gi|21264363 mannan-binding lectin serine protease 2 isoform 1
           precursor [Homo sapiens]
          Length = 686

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 34/186 (18%)

Query: 72  GTPLPTYEEAKQYLSYETLYA---NGSRTETQVGIYILSSSGDGAQHRDSGSSGKSRRKR 128
           G  + TY+   QY   ET Y    N  +   +   +  SS G+ +        G S R  
Sbjct: 382 GPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSKGEKSLPVCEPVCGLSARTT 441

Query: 129 --QIYGYDSRFSIFGKDFLLNYPFSTSVKLSTGCTGTLVAEKHVLTAAHCIHDGKTYVKG 186
             +IYG         K    ++P+   +   T   G L+ +  VLTAAH +++ K +   
Sbjct: 442 GGRIYGGQ-------KAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQK-HDAS 493

Query: 187 TQKLRVGFLKPKFKDGGRGANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNANDIGMDYD 246
              +R+G LK       R +   T A  E +                 +G  +D G D D
Sbjct: 494 ALDIRMGTLK-------RLSPHYTQAWSEAVFIH--------------EGYTHDAGFDND 532

Query: 247 YALLEL 252
            AL++L
Sbjct: 533 IALIKL 538


>gi|4503649 coagulation factor IX preproprotein [Homo sapiens]
          Length = 461

 Score = 32.0 bits (71), Expect = 0.96
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 155 KLSTGCTGTLVAEKHVLTAAHCIHDG 180
           K+   C G++V EK ++TAAHC+  G
Sbjct: 247 KVDAFCGGSIVNEKWIVTAAHCVETG 272


>gi|148231605 ovochymase 2 [Homo sapiens]
          Length = 564

 Score = 32.0 bits (71), Expect = 0.96
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 5/63 (7%)

Query: 120 SSGKSRRKRQIYGYDSRFS-IFGKDFLL--NYPFSTSVKLSTG--CTGTLVAEKHVLTAA 174
           S G+S  K Q + Y + FS I G   +   +YP+  S+K      C G++V+ + V+TAA
Sbjct: 32  SCGQSLVKVQPWNYFNIFSRILGGSQVEKGSYPWQVSLKQRQKHICGGSIVSPQWVITAA 91

Query: 175 HCI 177
           HCI
Sbjct: 92  HCI 94


>gi|110815798 ovochymase 1 [Homo sapiens]
          Length = 1134

 Score = 32.0 bits (71), Expect = 0.96
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 135 SRFSIFGKDFLLNYPFSTSVKLSTG--CTGTLVAEKHVLTAAHCI 177
           SR S +    +  +P+  S+K      C G+L+ E  V+TAAHC+
Sbjct: 45  SRISSWRNSTVTGHPWQVSLKSDEHHFCGGSLIQEDRVVTAAHCL 89


>gi|110578663 hypothetical protein LOC203074 [Homo sapiens]
          Length = 352

 Score = 32.0 bits (71), Expect = 0.96
 Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 25/128 (19%)

Query: 148 YPFSTSVKLSTG--CTGTLVAEKHVLTAAHCIHDGKTYVKGTQKLRVGFLKPKFKDGGRG 205
           +P+  S++  +   C G+++ +  +LTAAHC++  + +             P+      G
Sbjct: 79  FPWQVSIQARSEPFCGGSILNKWWILTAAHCLYSEELF-------------PEELSVVLG 125

Query: 206 ANDSTSAMPEQMKFQWIRVKRTHVPKGWIKGNANDIGMDYDYALLELKKPHKRKFMKIGV 265
            ND TS   E  +     V    + K + + N     MD D ALL L  P K   +K+ +
Sbjct: 126 TNDLTSPSMEIKE-----VASIILHKDFKRAN-----MDNDIALLLLASPIKLDDLKVPI 175

Query: 266 SPPAKQLP 273
             P +  P
Sbjct: 176 CLPTQPGP 183


>gi|4505881 plasminogen [Homo sapiens]
          Length = 810

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 3/34 (8%)

Query: 147 NYPFSTSVKLSTG---CTGTLVAEKHVLTAAHCI 177
           ++P+  S++   G   C GTL++ + VLTAAHC+
Sbjct: 591 SWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCL 624


>gi|116292750 lipoprotein Lp(a) precursor [Homo sapiens]
          Length = 2040

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 3/34 (8%)

Query: 147  NYPFSTSVKLSTG---CTGTLVAEKHVLTAAHCI 177
            ++P+  S++   G   C GTL++ + VLTAAHC+
Sbjct: 1830 SWPWQVSLRTRFGKHFCGGTLISPEWVLTAAHCL 1863


>gi|4503549 neutrophil elastase preproprotein [Homo sapiens]
          Length = 267

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 148 YPFSTSVKLSTG--CTGTLVAEKHVLTAAHCI 177
           +PF  S++L  G  C  TL+A   V++AAHC+
Sbjct: 41  WPFMVSLQLRGGHFCGATLIAPNFVMSAAHCV 72


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,317,915
Number of Sequences: 37866
Number of extensions: 777512
Number of successful extensions: 1655
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1598
Number of HSP's gapped (non-prelim): 85
length of query: 383
length of database: 18,247,518
effective HSP length: 104
effective length of query: 279
effective length of database: 14,309,454
effective search space: 3992337666
effective search space used: 3992337666
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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