Guide to the Human Genome
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Name: OVCH2 Sequence: fasta or formatted (564aa) NCBI GI: 148231605
Description:

ovochymase 2

Referenced in:

Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         27           2
 C cysteine            3.4         19           1
 D aspartate           3.9         22           1
 E glutamate           5.7         32           2
 F phenylalanine       4.4         25           2
 G glycine             8.3         47           2
 H histidine           2.8         16           2
 I isoleucine          6.6         37           2
 K lysine              5.5         31           2
 L leucine            10.6         60           3
 M methionine          1.4          8           1
 N asparagine          3.4         19           2
 P proline             5.0         28           1
 Q glutamine           4.1         23           1
 R arginine            3.9         22           2
 S serine              9.9         56           2
 T threonine           5.3         30           2
 V valine              6.0         34           1
 W tryptophan          2.3         13           1
 Y tyrosine            2.7         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ovochymase 2 
OVCH1                 0.256   ovochymase 1 
TMPRSS6               0.140   transmembrane protease, serine 6 
KLKB1                 0.135   plasma kallikrein B1 precursor 
TMPRSS3               0.129   transmembrane protease, serine 3 isoform 1 
TMPRSS9               0.126   transmembrane protease, serine 9 
TMPRSS5               0.125   transmembrane protease, serine 5 
PRSS33                0.124   protease, serine, 33 
HPN                   0.123   hepsin 
HPN                   0.123   hepsin 
PRSS8                 0.122   prostasin preproprotein 
PRSS36                0.122   protease, serine, 36 
PRSS7                 0.120   enterokinase precursor 
PRSS27                0.118   marapsin 
TMPRSS13              0.116   transmembrane protease, serine 13 
F11                   0.116   coagulation factor XI precursor 
TPSG1                 0.116   transmembrane tryptase preproprotein 
TESSP2                0.115   testis serine protease 2 
CTRB1                 0.115   chymotrypsin B1 
PRSS22                0.114   protease, serine, 22 
CTRB2                 0.113   chymotrypsin B2 
F12                   0.113   coagulation factor XII precursor 
TMPRSS4               0.112   transmembrane protease, serine 4 isoform 3 
TMPRSS4               0.112   transmembrane protease, serine 4 isoform 1 
CTRL                  0.112   chymotrypsin-like 
LOC100293486          0.112   PREDICTED: similar to hCG2041452 
LOC100291379          0.112   PREDICTED: hypothetical protein XP_002346556 
LOC100288960          0.112   PREDICTED: hypothetical protein XP_002342392 
TMPRSS2               0.112   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.112   transmembrane protease, serine 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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